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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000275_pilon:258499..261025- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_025790 ID=XLOC_025790|Name=XLOC_025790|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2527bp|location=Sequence derived from alignment at sc0000275_pilon:258499..261025- (Clytia hemisphaerica_ch_hm2_pilon)
CGATTACTGTTTCAGATTTCCTTTAATGGAGTGGTTGATCGAATGGTGAA
AAACGATATCGACGTCAAATGTCCACAACACGAGAAAGAATGTCAATGGC
AAGGAAAAATCATTGACTATAAGGTAATAACTAATTCTACCAGCAAAACC
CCATTAGTAATTCAGAATACTCTAGAAAAACTTTTTCTTTGATCTTGGGG
ATTGAGTAGTATCTCTTGTTTAGACGGTAATTTTTTGCTCAGATTTTCAT
GCTCTATCCGATGGTATCAATCATTTTTGTCGAATTCCGGAAAACTTGCA
ATGTGGGTAAACGAAATCTTCGGCCTTCTCGATAAATTTCAGATATCTGA
ATCTGATGTTATTTCGACAAATATTAAACATATCATAGGGTTATAACATA
GTGTATATGTGATACTATTCCAAAATACATCAGAATTGTTGCTCGATTTT
CTGTTTCACTGTTTTCACATGTACTTCAGTGTTTTCCTTTGTTTTTTTAT
GAATGGACCAACGAAATTCCCCTCCGGGGCTCCTACTCTTAGGTTCCAAA
TAAACGGAGGGGGGGGGTTCGAATAAAACGGGGGGGGGGGGTTGGAAAAT
TTTCTAGATTTTAATAACACGGGGGGGACCTAATTGCCGGGGGGGGGGGT
TGGAAATTGTACTTCTGAAACCCAAAAATAAGGTAAAAATAGGCTAAAAT
CAGGCTATTTAGAGCAAAATAAGGGGCCTTCTCTTTGACAGATGAAAATA
TTCTTAGAGATTAATAACGGGGGGGGGGGGTCCTAATAGGTCCGGGGGGG
TTGGAAAATTTTTCGAAAAATTAACAAGCGGGGGGGGGGGGCGTTTATTT
GGAACCTAAGAGTAAGTAAGAAATAGCCCCATACTATGAGGGCGAAGTTA
ACTACAATACAAATATCAAGGTTCATTATGTCATTGAATACTTGCACTGA
ATATTTCCTTTTTTAAGGATCATGAGACAAAATGCGATTTTGTAATGGTA
CCGTGTAAAAATAAAGGATGCAACAAAAGTGTGGCTAGAATCAACATGGC
TGATCACAAATCCATTTGTCATTATCAAATTGTTGAATGTGAATATTGTA
GAAAAAAGACTACAAAACTCGAGTTTGGGGTAAGTTTAACTGTGACCAGT
TCTTAACACTTTCCGAGCGCATAAAAGTTTTTTTTTTTCGCTACACTTTT
CCCTAATAAAAACATAAGCGGGGTGATCAGGTTGCTTGAAATGAGGAGTT
AAATTTTGGAAAAACTTGCCGTGTATCGGTCTTTGGTTAGCGAGGATCTG
TGTCTCAGTTTCCCCCAGTATTCTGGGACAAGGACAAACCCAGCATTCTC
TTCAAAAACAACCGTACGTTCGGCTCAAAATTAGGCGTTTTGAAATCGGA
CCCTTACATTGTAGAGAAAGTTCCTGAATTCCAAATTCCTTTCTTGATGC
ATAGAAAATATAGCATGTAACAGTCAAATACACGAATCCTATAAAATAAT
CTAACGGCATAGCATTTTCTGTATTATTCTTTTAGAATCATTTGTGTGGA
GAATGTCCGTTAGTGAACGTCAAATGTCCAAATGAGGGATGCCAATCAGC
ACTTGTTCGACAAGAGGTAGAAATTAACTTCCCCTTTTCTTGCTACCGCA
ATTTCTTACTTGGCAGAAACTTTCGCGAAAAAGGGCAAAAATCGCGACAG
TTTCTGCCCGCGAAAGTTTCTGTCCTTAACGTATAAGGTAAAATAATGAT
AATAAGAACATTGTTCCCTTGTTTAATTTTTCTTTCTGTTCTTTGATACT
GTACAGATTCCCGAACATTTGGCTGAAGAATGTTTGTACGAAAAGATTGA
ATGTGAATATTTTGATGTTGGCTGCAACCAAAAAGTAAGTATGTTGTCGG
TGGGAAGACAAGTGTGACAAATTCTTAAAGCTAAGATTCTTAGACTTCGG
ATTGGCCTAAATTACTCACTGTGTTTCTTTCAAGAATTTTGTTAAGGAAA
GACTTGGAAAGATCTCGTCCCCATGGTATCTAAGCCCTATCTAAGTTACC
ATGGACGCAAGGTGATACAGAATAGTGTTGGTATTATCTGACGCGCGACC
AGTAAGCATGAAAAATTCTATAATACGCAGAGGGAACGAGGTTGAGGAAA
TCCTATAGTCTGAATTGCAGACCTACACAAAACAGGAGCACAAATCTGTT
AGTGGATGCCATAGTAGCCTAAGGAAAACCTTGGTTTTGAACGAGACATG
CAACTCTTTCTAATTAACCATTTTTGCGTTTTATTCTTGAATTTATCAGG
TTCAACGCAAAGACCTGGATAAGCATAACAAAATCAACCTAGCCAAACAC
CAGAAATTTATGCTTCATGATTACAAATTGATGAAAATGCAACTTGCTGA
GGTCTGCCAATCTAACAAGCAGTTGAAAGATGACCTCAAAAAAGCCAACG
AAAATATAGAAAGGCTGAACCCACGAAACCAGAACCAATTAAAACCATTA
TTGTGCGGAAAAAAGTATCGAGTTTGA Coding sequence (CDS) from alignment at sc0000275_pilon:258499..261025- >XLOC_025790 ID=XLOC_025790|Name=XLOC_025790|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1344bp|location=Sequence derived from alignment at sc0000275_pilon:258499..261025- (Clytia hemisphaerica_ch_hm2_pilon)
CGATTACTGTTTCAGATTTCCTTTAATGGAGTGGTTGATCGAATGGTGAA
AAACGATATCGACGTCAAATGTCCACAACACGAGAAAGAATGTCAATGGC
AAGGAAAAATCATTGACTATAAGCGATTACTGTTTCAGATTTCCTTTAAT
GGAGTGGTTGATCGAATGGTGAAAAACGATATCGACGTCAAATGTCCACA
ACACGAGAAAGAATGTCAATGGCAAGGAAAAATCATTGACTATAAGGATC
ATGAGACAAAATGCGATTTTGTAATGGTACCGTGTAAAAATAAAGGATGC
AACAAAAGTGTGGCTAGAATCAACATGGCTGATCACAAATCCATTTGTCA
TTATCAAATTGTTGAATGTGAATATTGTAGAAAAAAGACTACAAAACTCG
AGTTTGGGGATCATGAGACAAAATGCGATTTTGTAATGGTACCGTGTAAA
AATAAAGGATGCAACAAAAGTGTGGCTAGAATCAACATGGCTGATCACAA
ATCCATTTGTCATTATCAAATTGTTGAATGTGAATATTGTAGAAAAAAGA
CTACAAAACTCGAGTTTGGGAATCATTTGTGTGGAGAATGTCCGTTAGTG
AACGTCAAATGTCCAAATGAGGGATGCCAATCAGCACTTGTTCGACAAGA
GAATCATTTGTGTGGAGAATGTCCGTTAGTGAACGTCAAATGTCCAAATG
AGGGATGCCAATCAGCACTTGTTCGACAAGAGATTCCCGAACATTTGGCT
GAAGAATGTTTGTACGAAAAGATTGAATGTGAATATTTTGATGTTGGCTG
CAACCAAAAAATTCCCGAACATTTGGCTGAAGAATGTTTGTACGAAAAGA
TTGAATGTGAATATTTTGATGTTGGCTGCAACCAAAAAGTTCAACGCAAA
GACCTGGATAAGCATAACAAAATCAACCTAGCCAAACACCAGAAATTTAT
GCTTCATGATTACAAATTGATGAAAATGCAACTTGCTGAGGTCTGCCAAT
CTAACAAGCAGTTGAAAGATGACCTCAAAAAAGCCAACGAAAATATAGAA
AGGCTGAACCCACGAAACCAGAACCAATTAAAACCATTATTGTGCGGAAA
AAAGTATCGAGTTTGAGTTCAACGCAAAGACCTGGATAAGCATAACAAAA
TCAACCTAGCCAAACACCAGAAATTTATGCTTCATGATTACAAATTGATG
AAAATGCAACTTGCTGAGGTCTGCCAATCTAACAAGCAGTTGAAAGATGA
CCTCAAAAAAGCCAACGAAAATATAGAAAGGCTGAACCCACGAAACCAGA
ACCAATTAAAACCATTATTGTGCGGAAAAAAGTATCGAGTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000275_pilon | genome | sc0000275_pilon:258499..261025 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 445-672:229 |
| Aaloc | 367-444:722 |
| Aaloc | 286-366:993 |
| Aaloc | 124-285:1561 |
| Aaloc | 1-123:2528 |
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