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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000449_pilon:107745..112008- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_025725 ID=XLOC_025725|Name=XLOC_025725|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4264bp|location=Sequence derived from alignment at sc0000449_pilon:107745..112008- (Clytia hemisphaerica_ch_hm2_pilon)
GTTTGTGAACCTAAAAAAGAAGCAATGGTTATGTGTCATGGACGGTCCTA
TACATTACATGGGAAAGCAAAGAATGGTGCCAGCGCTAAACAATATGAAT
GGTACAAAAAGAGCAAAAAGGATTCGCTAGTACGATTGGATAGCGATTCT
CAATACTCAATTACATACTCCGACCGTGATCCAACAAAAAGCAGTTTGAC
TATTCGTTCTTTCAGTATGGTTAAACACGAAGGATTTTACGCTTTCAGGA
AAGCTAATCTGAACTACATCGATTGTTATGATTACAAAGTGACAGCTTTT
TGTAAGTTAAATTGCTCTTTGCCCCCCGGGGGAGGCTACCTACCTACCTA
CCTACCTACCTGGACAAAAAGTGAAACATTTCAGTCCCACACAGGATCAC
TTTTTCGCAAATTTTAGCAAAGATAGACTCCATTTTTGAGCATCAGTGGA
ACATCCCCGTCAGTTGGGTAAACGACACGTCAATTACCATATCATTGAAA
ATCACGAAACAGTTAAAAGATTTAAGATATCGCTGAAGTAAAAAATCTTG
TGGTAAAAGGTCTCGTGAAGTTGATGGATCGTCACTTGAAAAATTTTTTT
TAATTTTATCAAAGTATGTCACTTTTTTGAATTTATAGTGCAATTGGAAT
ATATTGATGGGAAAGATAAATTTGACGTCCTGGCTGGCGAGGATTTAACA
CTTGCAGTGAAAGCAAAAGACCCTGCATCTGAAACAAGCTGGTCTGTTAA
TGGACAAAGTTTGATAGAACCTTTAATTGACGCATCTCCTCATTATAACT
TGCCTTTCCCTAGTCTATCTGACTCTGATACGCAAAGTAAGTAAAATCAT
GAACATATAAACGACTGGACATCCATCTCCTTTGTCTTTTTGTAGAAAAG
GCTGCTAGCTTCGTTGCCGCCTCGTTAAAAGCATAAAATGAAACAATAGA
TTTTGATGATATACCACTTGGGAGTACCTTGCTAACAACGTCAAAACTTT
GACAAAAGTCTCTGTTGTTCTACTCTTCTCAAGTCTTTTATCTATATCAT
AATAAAGATAACAGAGGCAAAATCATCGTCAGCTTGTCAAAACTCCGACT
AATATTTCTAAATTTTGACTTAAAAGTGTCTAATAATTTTAGAAAGTGTC
GCATTCTAATTTCGATATTCTTATGACACAGGCTCTAAACTTTGGCAAGC
TATTTTTTTCAAGTCATAAAAAAAATTATTGAAGTGACAAAAGGGATTCA
AAAGTATACACGCAGTTGAAATTCTGCATTTTAGAGTTGAAAATGTTGAT
AAAATATATTACAAACTTGTGAAAAAATTTGAAAATAATTTTTTTGTACA
TTAGGAGTAATGTTCAAGCTCTATCAACCCTTTTACCTAAATAATTCAAA
GAAATAAAATTATGACGGAATATTGTCGGATTTTTCATACCAATTTTGAA
ATACAGGCGGCAACGAAGCTCGCTTCAAAGAGACAATAAAAGATAGATGT
CCAGTCGTTTATATGTTCATGGTAAAATGTAAATCATTTTTCTTTGTACA
GTAATAAGTAAAATATTTTGTCGTGAAATAGTTTGCTTATGAGAGTAGAA
AACCTCTCTTGAAAGAATAATCTTACACATCTTAAAGTCCATGGAAATAT
CCCTAGAAATTCTCAAATTACTAGGAAACGTCAAAGTCATTTTGCAAGAC
ACTGTTGTTGCGATGAGAACGAAATTGATTGATTTATTCATTTTTTTTAC
CTTTTTTGGTGGCCCCTAAACACAAATCATCGGGGCAAAAAGTTCAGATG
CCTCTAGGGATACTGACAGCAGACAATACATTTTTTCGACTGGGACGGTA
ATTTTCTCATCGACTATTTTTTGATATTTGAATCATACCAGGAGGGGGAG
TACTCAAGGTACGATTCTTAAGGGTAATTTTTTTCAGGTTTCCCAAAGTG
CACTGAAAGGATGTGTAACGTGAGAAAAACGAAGTTTTTTTGGCAAAATG
AGGGTCGATTTTCGCTCAAACTAACTCAATTTTGAATAACTTTCTATGCA
TTCTAAGGGTTCAATTTTGCTCCCCTAATTTATGTCTACACATACGGTAG
CTTTTAGATCGCGCCCCCCTCCGGTGGCCCAAACAAGTGATTAGAAGCTC
TATCACAGCTTAGCTTTTTTGGTGTTGATGTTTCTGTTTCTTAATGTAAC
GATATATTCTAACATGGTCATTCGAATAAACCTGGGGAACCTGGGGACAT
GTTTTCAAATTCTTTGCTACTTATTCTAGTTTTGGAGATTCTCAACCCTC
GACGGAGACATAGTGGAAGGTACAAGCTTAAATGGTCAACTCATTCTCAT
CAATGCCCGATTGTCAATATTTATTTCAACGTTACTGTTAGAGGTACGAG
ACTTTTTTTTGATTTTCATGTGAAGTATATATGCTGTCTTCCTTCTTTCC
TAAAAAAGGATTATAGAATTCTATTCCAAATTCTACATGACGAGGTTTAT
TTATTTTCTTAAAAAAAGTAGCTATGCTTCAACTTGAAGAGAGTACAATA
CGCTTTTAAAACAGTATTCAGTACATATTTGTATGCACTCCTGGGGGGGG
GGGATACTTAGGCAAATGGAGGGTACGGTATGTGCCGCCCTTAAGGGTAC
CTTTTTTGGACTTCCAAAGTTCCGCTAAGGGTCGAAAAAATCCTAGATGC
TAATTCGCACCTTAACAGCTGTTGATGCAGGTACCACTTCCATAAATGTA
GAAATGGAAGAAATTCAAGTAAATTTCAAACCTACAACCCTATATCTATA
CTACCAAAAAAGAAGAAAATATAAGAAGAAGCCTTATTCATACAAACTTT
TATCGTTTTTTTTGAAGAGATGGTCACCCTTTCCACAATACATTATCGGG
AAAAAGTAAATTAACGAAAATGTAATCTGTTCTCCAATTGCATAGAACGT
GACACAACAAGTACAACATCACCCACTACCATCACTACGACCAGTGCGAT
AACAACAACACCGCCATCTTTACCGAGCACTGATCAACCAGTACTCAAAG
TGGGTCAGAAATACGTTTCACAAGACGAAAGTGATGACTCTATAGGCTTC
GTTATGTTGATTGTCGGAACTTTCTTAATTGGTCTTGCGATCGGATCTTG
TGTGCTTTGGTACTTTTATAAAAGAGAGTTAGCTCGCAAGACTAGGAGGT
GAGTTCGATTAGCTCATTAGACTAAACTTATATTTGTTCCTTAAACTTGT
TTTGTCATTAAAATTTTGGTCCAATGGGTATCTGGCATAGATTTATAAAG
CCCAAATGGCTATATGTCGTGTTTAAGCTCTTCCAAGCAAAAAAACTAAA
TATCGCAAAAAATATTGCTGTTATTGTTTTCGAAAACCCGCGAAGCTTCT
TATTGGTCAAACGCTGAAATTCTATTGTAATGTGACGTGACCTAGGCAGG
ATTTCCTATCTAACCTTGGCACATTTTTTAGCCAAAGCACGGCTATAAAT
CTATGATATCTGGTCCTTTGCAAACTGGTCTGTACCGGTACACAACTACC
CCCTGTCATATCTTTTGAGCCTGTAGGATCTCAAGAACTAAGGAAGCCTT
TGACTTTTATCATCAGTGATAAATATTGACCATTTTATATAGTGTGAAAA
ATTTCAATTTGGTCTCGTGTGTGGTTGATATTTTACAGATAGTCTGGCAT
TTTACAAATTGGTGCACAAAAATTTCAAACCCCTCCCCCTCAGATGGACG
TAGGATTAAGGTCAACCTTAAATTTAGCTTGGTGCCTGTACACTTTCGAT
AGAATTCAAAATATTTTATTTAAAATTTCAATTTCAGGAGTTTATCTATT
TCATCGTTACATAAAGACAAGAATTATAGATCGGAATCAATGAATCGAGA
TGAATCGGACACATCTGAGGAGGATTCAGACGATTCAGACAGCAAACCTT
TACTTCATAATGGCAATGTTACACCAAATAGCATCCAGCCCCTACCACAG
TATAGATACGGTGAAGGTACTCACAATGGATATGACGAAGATAATGGGTG
TTTGTCTGACAATAACTTTGACCCACGACTCCAAAATGAATTTGAGCCAC
AACTTCGGAATAACATTAACCGTCAACCGCAGAATAATAGTAACCATGTA
CCACAGAATAACGTCCCTCCTGTACCACGAAGGCTTCAAAAACCAATAGT
TGTACCCAAAAATAATTTGCAAAATAAATTTGAACCACAACGTCGGAATA
ACTTTGACCCTTGA Coding sequence (CDS) from alignment at sc0000449_pilon:107745..112008- >XLOC_025725 ID=XLOC_025725|Name=XLOC_025725|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2586bp|location=Sequence derived from alignment at sc0000449_pilon:107745..112008- (Clytia hemisphaerica_ch_hm2_pilon)
GTTTGTGAACCTAAAAAAGAAGCAATGGTTATGTGTCATGGACGGTCCTA
TACATTACATGGGAAAGCAAAGAATGGTGCCAGCGCTAAACAATATGAAT
GGTACAAAAAGAGCAAAAAGGATTCGCTAGTACGATTGGATAGCGATTCT
CAATACTCAATTACATACTCCGACCGTGATCCAACAAAAAGCAGTTTGAC
TATTCGTTCTTTCAGTATGGTTAAACACGAAGGATTTTACGCTTTCAGGA
AAGCTAATCTGAACTACATCGATTGTTATGATTACAAAGTGACAGCTTTT
TGTTTGTGAACCTAAAAAAGAAGCAATGGTTATGTGTCATGGACGGTCCT
ATACATTACATGGGAAAGCAAAGAATGGTGCCAGCGCTAAACAATATGAA
TGGTACAAAAAGAGCAAAAAGGATTCGCTAGTACGATTGGATAGCGATTC
TCAATACTCAATTACATACTCCGACCGTGATCCAACAAAAAGCAGTTTGA
CTATTCGTTCTTTCAGTATGGTTAAACACGAAGGATTTTACGCTTTCAGG
AAAGCTAATCTGAACTACATCGATTGTTATGATTACAAAGTGACAGCTTT
TTTGCAATTGGAATATATTGATGGGAAAGATAAATTTGACGTCCTGGCTG
GCGAGGATTTAACACTTGCAGTGAAAGCAAAAGACCCTGCATCTGAAACA
AGCTGGTCTGTTAATGGACAAAGTTTGATAGAACCTTTAATTGACGCATC
TCCTCATTATAACTTGCCTTTCCCTAGTCTATCTGACTCTGATACGCAAA
TGCAATTGGAATATATTGATGGGAAAGATAAATTTGACGTCCTGGCTGGC
GAGGATTTAACACTTGCAGTGAAAGCAAAAGACCCTGCATCTGAAACAAG
CTGGTCTGTTAATGGACAAAGTTTGATAGAACCTTTAATTGACGCATCTC
CTCATTATAACTTGCCTTTCCCTAGTCTATCTGACTCTGATACGCAAATT
TTGGAGATTCTCAACCCTCGACGGAGACATAGTGGAAGGTACAAGCTTAA
ATGGTCAACTCATTCTCATCAATGCCCGATTGTCAATATTTATTTCAACG
TTACTGTTAGAGTTTTGGAGATTCTCAACCCTCGACGGAGACATAGTGGA
AGGTACAAGCTTAAATGGTCAACTCATTCTCATCAATGCCCGATTGTCAA
TATTTATTTCAACGTTACTGTTAGAGAACGTGACACAACAAGTACAACAT
CACCCACTACCATCACTACGACCAGTGCGATAACAACAACACCGCCATCT
TTACCGAGCACTGATCAACCAGTACTCAAAGTGGGTCAGAAATACGTTTC
ACAAGACGAAAGTGATGACTCTATAGGCTTCGTTATGTTGATTGTCGGAA
CTTTCTTAATTGGTCTTGCGATCGGATCTTGTGTGCTTTGGTACTTTTAT
AAAAGAGAGTTAGCTCGCAAGACTAGGAGAACGTGACACAACAAGTACAA
CATCACCCACTACCATCACTACGACCAGTGCGATAACAACAACACCGCCA
TCTTTACCGAGCACTGATCAACCAGTACTCAAAGTGGGTCAGAAATACGT
TTCACAAGACGAAAGTGATGACTCTATAGGCTTCGTTATGTTGATTGTCG
GAACTTTCTTAATTGGTCTTGCGATCGGATCTTGTGTGCTTTGGTACTTT
TATAAAAGAGAGTTAGCTCGCAAGACTAGGAGGAGTTTATCTATTTCATC
GTTACATAAAGACAAGAATTATAGATCGGAATCAATGAATCGAGATGAAT
CGGACACATCTGAGGAGGATTCAGACGATTCAGACAGCAAACCTTTACTT
CATAATGGCAATGTTACACCAAATAGCATCCAGCCCCTACCACAGTATAG
ATACGGTGAAGGTACTCACAATGGATATGACGAAGATAATGGGTGTTTGT
CTGACAATAACTTTGACCCACGACTCCAAAATGAATTTGAGCCACAACTT
CGGAATAACATTAACCGTCAACCGCAGAATAATAGTAACCATGTACCACA
GAATAACGTCCCTCCTGTACCACGAAGGCTTCAAAAACCAATAGTTGTAC
CCAAAAATAATTTGCAAAATAAATTTGAACCACAACGTCGGAATAACTTT
GACCCTTGAGAGTTTATCTATTTCATCGTTACATAAAGACAAGAATTATA
GATCGGAATCAATGAATCGAGATGAATCGGACACATCTGAGGAGGATTCA
GACGATTCAGACAGCAAACCTTTACTTCATAATGGCAATGTTACACCAAA
TAGCATCCAGCCCCTACCACAGTATAGATACGGTGAAGGTACTCACAATG
GATATGACGAAGATAATGGGTGTTTGTCTGACAATAACTTTGACCCACGA
CTCCAAAATGAATTTGAGCCACAACTTCGGAATAACATTAACCGTCAACC
GCAGAATAATAGTAACCATGTACCACAGAATAACGTCCCTCCTGTACCAC
GAAGGCTTCAAAAACCAATAGTTGTACCCAAAAATAATTTGCAAAATAAA
TTTGAACCACAACGTCGGAATAACTTTGACCCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000449_pilon | genome | sc0000449_pilon:107745..112008 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 868-1293:427 |
| Aaloc | 616-864:1318 |
| Aaloc | 502-612:1984 |
| Aaloc | 304-498:3625 |
| Aaloc | 1-300:4265 |
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