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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000468_pilon:13944..18747+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_025639 ID=XLOC_025639|Name=XLOC_025639|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4804bp|location=Sequence derived from alignment at sc0000468_pilon:13944..18747+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTGATAACAATAGTGGCaagaatgatttgaaaagaaagcgCATTGG
TAAAAATGGACCTTACGAGAAATCGGTAAAAAGcttatttcaattttaag
tTAATCTTTTCTGATGGAGCGTGAAATTGTCTAgtaattttctgtaaaaa
cttATTAATAATTGTCATTTTTCAGCTCGCTTACATTACAGATGGCAGAA
TGCGTCGAGCTAAAGAGAAAGCCAAGCTTGGGCAGTTGGAAAAAGTTGTA
AGTTTTTTGCTTTCAACAATTACAATTTTAATAGGATGTTATTCTTTTTG
TTGAAGGAATAGTTAGGGTAATAgtgaaaaagattttacacaaggaggtt
ttgattttttaggttTATGAAATATCTCTGCTGACAAAGACACCAGTTGC
TGTTATGGCCCTCAACTCCTACTCCCAGATTTGGATTGCAGGTAAAGAGC
GATTTATTATGAACTTCTAAGCCTTTTATGTATATTAGCATTAGCCATAC
TTGCCTAtgaaatttactttcctaaTTAACTAAATCAGTAGGGTCAGATG
AGTTATTGATTCAAGCAGGACCtctgaaaatttagattttttaaacacGC
CTATGATTTGATTACTCTACACGAGGAGGTCAGGACCAGATAGCAAACCT
AGGGTTAGGCTATTAAAAAGTCACTTTGTTATTGATACCAAATTGAGGGG
GTAGATCCCCctttttgaaagtaaaagaAACTTTTAAGTTGATGAAAATA
CCAAAGTGATGAGGTGAACTccctttttaaatgtttcttaatttGAAAAT
GGTAACTGACTCGAAATTACTCAAATTTGTAATGTAATGTAGTGTAAAAT
TTATTTGGTCAAAAAGGTCTATAATTTAGTCATTGCAACAAGCATTGATG
TGGACCTactataatttaaaaaaataataagataataaaatataaataat
tatttcgactattaacaaataaataCATTCTTACAGTTAAATCGGCTAAA
ATAAATGACTATCAGAGATTATTGTAAAAGTAATTGAATTTAGAGAAAAA
GGCTTGCAAAGACAAATAGAAATTGCTGGAAATTGTGTATTGAGTGTTAT
AGTTTAGctgagcaaaaaaatggataataaacgtgagaaattaatagaac
ataaatattaaaatacatatattaaaaGGCTTTTACTAGGAAATAGGTTa
attaaaattaagaaaatataggtaAATGGGATTCTGGCTTAAATTCTAGT
TACTTGGGTTATATATTAttaatttgtatattttataaCTGAGAATATTt
gaattcttgaaaaactttaGGGCGAAATTGAtagattcaaaatattttgc
tattatttgagaattttaaagtaatacaaaaaacttttcagtaaaataaa
aaactttattacttattttagtaatttatttttGGGGGGTGTAGGGGTAT
TTGTCATTTTGCTGGAAGTATTCATGTTTGTTTTAGTACCGATTTAGTGG
ATGGTCCCCCCTTTTTCCTTAAACTGAGGTTAATAAGTTGGTGTtgataa
caattttttatattatttttaccAGGTACGACTGACAAAATGACTGAGTT
TGTGAGTAACGAGGAACTCCAAAGCAAGTTTGAAATGGCGGCGAAAGGTG
ATTCTGAACCGTACTATAATTTTcaaagtaagtgaaaaaatttccaacca
tCAACTAATATTGCTttgcatttttcgattttcaaatcTATTTTCCTTGG
GGCTATGTTCTTCTTCTTGACAATCTCCGGGCTCCTGCGGTTTCTTGTGA
TTTACCTCGAAATTACCCGGTACTATTTTTAAGTAAACTGCAGGGATCTA
GAGGAAATATACTTTTGTATATGtacttttttcaatttacaaCCCCTCCT
CTAGCAATTAAGGTAAAATGAGTACTATTTTATGTCTGTCCATGTATTAT
CATTTTGCCATCCCAAATAGAGAAAAGACCGACACAGAATATTGTGGCAA
ATGAACAAGTAGACAGTGAGCAAGAAGAATTCGATTTTCCCGTTGACTGG
GCCAAGTTCAACACTCTTaaaaaaaGAGTGCTAGTGAGAAATCTAGTTCG
ATGGTACACTGGTAAATCATTtcttaagttttatttttcatataaaaaat
tgaTCTTTCTCTTATATCGCTGTATCATTTCAGAAGACATGACCTATTTC
GATAGGATTTTGTCTAAATCATAATCAAAAGTATCACTATCACTATCACT
TCACTTGAATATCTCTGCGGAATAACTCCTTCATTGATTTTAACCTTTGA
TGGTATGTTTGATTATTTGTATCATAAATACTACTAAGAAACCGTTTAAT
AAGAATCGTGAATGAAACTTGATGTGTTTGTTTCATCCTGCACCGGTGTT
TTAAATTTGAGGTGATAATCATTTGACCTTTATAACTCAAtgaaattgtg
aattttgatttccttttttttttaatttcagagaCGTGGAAACCGTGGAT
CCCTTCACTCAAACCAGAATGGTGGCCGGATGACATATCATTTCGGTCTA
CCCGAAAGTCTGATGTGTCATCTTTAGATAAGATATTAAATTCTTTTCTG
AAGTTTCGCGCTACAAGCAGTATGGTTAGTTTAGTCTTTGACTTATCTTA
GAGCTCTAGCTGTTGGTTCCTGTTGCCGATAAAGTGTTACTTACGCATAA
AAGTCATTTTGGGTAGTAGATGATAGGGGAGAAAGATAAGATATTAACAT
AACTAAAAATAGAGCAGTTTTAATATGTCAGTGGAGATCGGACTCAATGA
GCCGATGTGATGAACCCTCAGCGGTCACAGAGGTCGTCGTTAAGTTTCTT
AAACGTCGTCGCCATGCTTAGAGACCGTGGTTGAACAAAGAATTTGTCAT
CGAACATAGAGACCGCGGTCGGACGatgtctaaaaaaattaaacgaTGAC
CTCCACGACCGATGAAAGCTTATTATCTCGGCTTATTGAACCCGATCACC
TGATATTAATGTGGTCTAGTTTCATTTTGATCCATAATGACGCCAATAAA
AATTTGCACATCtaattcaaataagtttttttcgGTCCAATTTCAGACTT
ACAACGGGATAACCAGCTTCCAACCTTTTTTCCAAACTCGAGAAATTGCA
TATTATTGGTTTTGATTATGGCACCGGGTCTAAACCGTTTTTGAAAAAGC
AATGTAGAGGTGAAAAACTTTGACTCCCGCGTAAAGCGAAAAGTTTGTCC
CACGCGGAAAATAGACTCAATGGAAAACCTACTTTAGATTGagagtttta
aatattttaatattttaaggTGCGGCGTTTTAGAaactttgatattttat
ttggcGATAGTATGAcagacaaaaattgaaattcattcAGTATAGTAAGG
TCTGTCTTCTATTTATGAATGATCACGGGACGAATAActtctttttctca
tatttttaaggctttgtttcAAGCATCGGATCTCCCTGTTTCCTCCGAAC
AGTGGGCTGAGCTGAATTGGGAAGACTTTGATTTCCCGAAAAACTGGCTT
GCAAAGAATTGGTCACCGCCAAAAACTCCAATTAAAAAGAATCTAGTATC
TCTAAGGTAAGAACAGTTTTCAGAgttgatattttacgtggatagcacgg
taatctaggacttttaggccATCGATCGCTCCGTGCTGTAAATGATACTC
GATATTTCTGCTTGCGTTTCCTGATCAGGTAGATATTCAATGGCTATTGC
TTCTACACTTATGCTAGAGGGTTTCAAGAACAAAATCACCGAAACGAAAA
TGTATTGTTCATGAAaactttgttcaattttttaatggttttaaacttta
aattatTATTTACTATTTAAGTAAATATTCGATGTCATGTTGGTTTTAAC
TAGTACTATGTAACTATTTTTGTGATACCAACTCtaaagaaagaataaat
aaaaataaaataaaaattgataccACCGTCGAAAAGAACTAAAGCTCAAA
AGCTAACCGCGCCAACTAGGGATTGATACGTGTATTGGAGTGTCCAAACA
TTTTCCCTTTTAAATCTAGCACGACAGGCGCTAATTTTTCAAGTAAGAAC
ACGAAATTAGCTTTTGATACGAGTATACATTTTAGGTTTATTAGCTGTGT
TttataacgcattaaattaaattgtttcCGTTTAGGCACCGGTGTTTAGT
AGCCGATACAGATCTGGAGCCTGTTCGACTTCTTACATCAGCAGAATGCA
TTTCGTTTGCATTATTTCATGATAAGAAATTTTGGCCTTTCATAAAGCTG
GTTACCATAACGAGTTGCTTGTCACATATTGACGTTCTGGTCGAATGGGT
TAGTTAAGTCTAATAattagttttcaaaaatgagAATTAAGTGCTATCCC
TGCTTCGGAGATAAcaatattttctgtttttctcttttaaatttcataaa
aagcaTAAAAGAACATTACTTTTAGTTTCGTGCTTAGTTTCGTGCGTCAG
GCATTCATCCGATGtacaaagtttagaaaaaatgttaaaaaaacttTGTA
CTGGTTATGACAGACTACTAATTTTCTACTTTTATCAATAGATGACAAAT
GGTATCGGTAATATCAATCAGGAAGTGATACGAAACCTATTTGGCTCTTC
AAATTTGACACAGCTGAAATCTAATATACTAGAGAGGACACAAGATTCAA
GTAAAAATATTTGCACAActtttttttctgtgttttttttttccatgaCT
TTTCGAGCTCATTTTTCGCCTTCTTCTAACGAAGTGAGCAACGGCTTCAT
TTAG Coding sequence (CDS) from alignment at sc0000468_pilon:13944..18747+ >XLOC_025639 ID=XLOC_025639|Name=XLOC_025639|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2268bp|location=Sequence derived from alignment at sc0000468_pilon:13944..18747+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTGATAACAATAGTGGCaagaatgatttgaaaagaaagcgCATTGG
TAAAAATGGACCTTACGAGAAATCGATGTCTGATAACAATAGTGGCaaga
atgatttgaaaagaaagcgCATTGGTAAAAATGGACCTTACGAGAAATCG
CTCGCTTACATTACAGATGGCAGAATGCGTCGAGCTAAAGAGAAAGCCAA
GCTTGGGCAGTTGGAAAAAGTTCTCGCTTACATTACAGATGGCAGAATGC
GTCGAGCTAAAGAGAAAGCCAAGCTTGGGCAGTTGGAAAAAGTTgttTAT
GAAATATCTCTGCTGACAAAGACACCAGTTGCTGTTATGGCCCTCAACTC
CTACTCCCAGATTTGGATTGCAGgttTATGAAATATCTCTGCTGACAAAG
ACACCAGTTGCTGTTATGGCCCTCAACTCCTACTCCCAGATTTGGATTGC
AGGTACGACTGACAAAATGACTGAGTTTGTGAGTAACGAGGAACTCCAAA
GCAAGTTTGAAATGGCGGCGAAAGGTGATTCTGAACCGTACTATAATTTT
caaaGTACGACTGACAAAATGACTGAGTTTGTGAGTAACGAGGAACTCCA
AAGCAAGTTTGAAATGGCGGCGAAAGGTGATTCTGAACCGTACTATAATT
TTcaaaAGAAAAGACCGACACAGAATATTGTGGCAAATGAACAAGTAGAC
AGTGAGCAAGAAGAATTCGATTTTCCCGTTGACTGGGCCAAGTTCAACAC
TCTTaaaaaaaGAGTGCTAGTGAGAAATCTAGTTCGATGGTACACTGAGA
AAAGACCGACACAGAATATTGTGGCAAATGAACAAGTAGACAGTGAGCAA
GAAGAATTCGATTTTCCCGTTGACTGGGCCAAGTTCAACACTCTTaaaaa
aaGAGTGCTAGTGAGAAATCTAGTTCGATGGTACACTGagaCGTGGAAAC
CGTGGATCCCTTCACTCAAACCAGAATGGTGGCCGGATGACATATCATTT
CGGTCTACCCGAAAGTCTGATGTGTCATCTTTAGATAAGATATTAAATTC
TTTTCTGAAGTTTCGCGCTACAAGCAGTATGagaCGTGGAAACCGTGGAT
CCCTTCACTCAAACCAGAATGGTGGCCGGATGACATATCATTTCGGTCTA
CCCGAAAGTCTGATGTGTCATCTTTAGATAAGATATTAAATTCTTTTCTG
AAGTTTCGCGCTACAAGCAGTATGgctttgtttcAAGCATCGGATCTCCC
TGTTTCCTCCGAACAGTGGGCTGAGCTGAATTGGGAAGACTTTGATTTCC
CGAAAAACTGGCTTGCAAAGAATTGGTCACCGCCAAAAACTCCAATTAAA
AAGAATCTAGTATCTCTAAGgctttgtttcAAGCATCGGATCTCCCTGTT
TCCTCCGAACAGTGGGCTGAGCTGAATTGGGAAGACTTTGATTTCCCGAA
AAACTGGCTTGCAAAGAATTGGTCACCGCCAAAAACTCCAATTAAAAAGA
ATCTAGTATCTCTAAGGCACCGGTGTTTAGTAGCCGATACAGATCTGGAG
CCTGTTCGACTTCTTACATCAGCAGAATGCATTTCGTTTGCATTATTTCA
TGATAAGAAATTTTGGCCTTTCATAAAGCTGGTTACCATAACGAGTTGCT
TGTCACATATTGACGTTCTGGTCGAATGGGCACCGGTGTTTAGTAGCCGA
TACAGATCTGGAGCCTGTTCGACTTCTTACATCAGCAGAATGCATTTCGT
TTGCATTATTTCATGATAAGAAATTTTGGCCTTTCATAAAGCTGGTTACC
ATAACGAGTTGCTTGTCACATATTGACGTTCTGGTCGAATGGATGACAAA
TGGTATCGGTAATATCAATCAGGAAGTGATACGAAACCTATTTGGCTCTT
CAAATTTGACACAGCTGAAATCTAATATACTAGAGAGGACACAAGATTCA
AGTAAAAATATTTGCACAActtttttttctgtgttttttttttccatgaC
TTTTCGAGCTCATTTTTCGCCTTCTTCTAACGAAGTGAGCAACGGCTTCA
TTTAGATGACAAATGGTATCGGTAATATCAATCAGGAAGTGATACGAAAC
CTATTTGGCTCTTCAAATTTGACACAGCTGAAATCTAATATACTAGAGAG
GACACAAGATTCAAGTAAAAATATTTGCACAActtttttttctgtgtttt
ttttttccatgaCTTTTCGAGCTCATTTTTCGCCTTCTTCTAACGAAGTG
AGCAACGGCTTCATTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000468_pilon | genome | sc0000468_pilon:13944..18747 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 922-1134:4592 |
| Aaloc | 760-921:4187 |
| Aaloc | 613-756:3461 |
| Aaloc | 472-612:2484 |
| Aaloc | 331-468:1973 |
| Aaloc | 229-327:1578 |
| Aaloc | 148-225:363 |
| Aaloc | 76-147:176 |
| Aaloc | 1-75:1 |
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