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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000083_pilon:1171202..1174614- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_025621 ID=XLOC_025621|Name=XLOC_025621|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3413bp|location=Sequence derived from alignment at sc0000083_pilon:1171202..1174614- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGTGTTGAACCACTGGACAAGATCATTAAAACGTCAATCAAATCCAA
CATTACTCATTTTATGGTATCTGTTTTGGTTATGTTTGTTTTTTTCATTT
CTTTTAGAAATTAAATTAAAAGAAATAACTTTTATTAACTAAGAGGATTA
ACTTGGAAAATAAAAATTTTTATTTGGAAAATTATTATGATTTTTAAATG
TACAAAAAATTAATATTCCTTTTTTACTTTAGGATTGCTTAGCAGAATAC
GATTTGCCTGATACCAGATCCTTTGACAAACTACTGGCTTGGTCAGCATC
GTTTTTGTTAGAAGCAAAACTTGTCAAAAGCTGGTTGAAGAAGTGGACAG
AGCCTTCTTCTCTAGTTGATAAAGCTCTTGTCACACTAAAGTAAGTTACA
TTATAAATAGAAACTTAGCTGTACTGACTTGGTATACTAGGTAGATGCCT
TTTTCCAAGCAATATAAATCAAACTGAAAATTTTTATTTTTAATCACTTT
ATCAAAAATATCAACTAATACGAATTTTGTCTAATCTAATCTAATTCATT
GAATATTTTTGTTCAATTTTCAGGTATAGAGAAGTGCTGAATGTGGAAAA
TGTGGAAAGTCAGCCTGTGTGCTTTGAGAGGATCACGCAATGCTTGTCAT
TCTCTGTTCTTCAAAGTAAAAAATATGACGACTTTTTTGAACGTTTTGGA
CTGGCATCTTGTGTCAAAAACTATCATCAATTATTGACTGTAAGTTTTTG
CTATTATTGAATTTATGAAATAAGATGATTAGCAGCTCTTAGTCAAATTT
TATAGAATTATGTTTTAACTGAGTAAAATTGACACTTGTTTCTGGGACAC
TCTGGCATTAACCTTTTCTTTTAAGACCCTGGGATATTACATGTGATTTT
TCAAAGGGTTGATAGTCTAGGACACGATATGCTTTTCTTATATTTCTGTA
TCATAATTAATGAGATATCGTTTTTGATTATCTTTAAGATGAACCACAGG
GGAGATGATATGATCCCACCCATAGAGGAGGAGCCAGATAAATTTGCTGC
TGCTGTCCTGGCTGATCCTTCGTTAATGACCGGTACTTTTACTTATTTGT
CATAAAATAAGATTTTTGCTTTTCAACCTGTTTCAACGCCCCAGTCTTGC
TTTTTGTAGTTCTGTTTTATGTAGTTAAAATTGATTCAACCTGATAGGTG
AATCGAAACCTAAATCTTATAAAGCCAAGTTAATTGCACTTATTGAGAGT
AAATAAATTTCTTTTAATTGCCTTTAGAAATCAGTAAACTGATTGGCATT
GCTATCGAATGTGACCTTGTTATTGAATGGCATCGAGAAAATGATTGGAT
CAAGTTAGGACCATATTTGGCAGATAGGACCCCTCTTCGTGTTGGTGTCA
TCAACAAGGAGTTCTGTTCTCTTGTGAAAACTGAGGATTTTTCTATAGAT
GTTTGCGGAGAAAATCCATTTTGTATTTCCTCGCCATCATCAAACCAGAT
GACTTGTGGTCAATGTGGGTTGAGATACCACATCACATGTGTCGGGGACG
AGGATGAATGTGGGTGTAGGAAAATTGGATGGTTAAAAGAAAGGTACTTA
TCAGTTAATTTAGCTAATATAATAAATAGCCAGCTATTTTTCATTTTTAT
ATTCTGAGAAGAAAATCGGCTTACACTGTATTTTGTAAATCCCGTAATTC
ACAGTTATCAACAAGGGAATCTTTTCACTTTGCCGATGTTAGAAAAAGTG
ACGTCAAACTAGAGCAGCTTTGTTTCGGGATAAATACAGGGTGAATATTT
CTAGTTTTCATGCAAAATTCTGAAAACTAAAAATCAATCTAGAGAAAAAA
ATATTTTGCTTTGGAGCTTTGAATTTCTGCTCAGAATTATATTTGAAATT
CAAGGAATCTAAGTTTTTTAAATTTTATTTTAGAATCAAAAATGACATTC
TTGACGTCAAAAGATTTGAACGAAATACCGAAAAATCAGCTCATATTGCA
AGGGTATCTTGACTTCCTTTTCAATTTCATGCTAAGTGTGACAAGGAGTG
TGTTTTTTATTGGAAGCATCAATAAATGTTTTTCTTATTTAATAAAAAAA
TGGATGTATGAGTTATTTAATTTGAAAGAGAAAAAGAGTCTTAAGTTTGG
GTTTCAATTACAGATGAACCAGATGAAACATGAACATTAAAAAGGAGATA
GATTCTATTGCTTACATATATTTTTTAATTCAGAGCTTTATCGAGGATAT
TTGCCAAGGCAATATGAAAACAAGACGATCCGTTTCTATTGGTTCCCTAC
CCTTAGATGTAAACAAATTTTTTACTTGTATGATGTTAAAAGAATCAGTA
AGTTTTTTTTTTACCATCCTTTAATTGCAAATTAAGAACAGTTTTCTTGA
ATTAATTTTAATTCTCATAATTGCACTAATTCATAACCCAACTTTCATAA
ATGTCATGTTAATCAGTATAAATGCGAAATGTTTCATCAAGAATATTTAT
ACTGGTATGATTCATCTTTTCTGTCCACTTTTAACAAAAAGAAGTAGGCT
ACATTTTAAACTGGGGGCGCCACAGGTTAGGTAAGTAAAATATCTTTTTC
GGGCTAAATGTCAAAATAATTAGTACAGGTTGTTATATTAAAATAAAACC
TCTAACCTTTGGTACCCCCGGTTTAAAATTTGGCCTACTTTTTGACAAAA
GTGGGCAGATTTGATAAAAAAATTATTCTGTTTCCAGCGGCAGCATGCGG
TCACGTTCGTCACGCAACTCATATTGAACGATGGGAATTTGCAACGTGTT
GTTAAAGAATTTTTTCCAGAATCGGAACTTGCAAACGTGATTGCAGATTG
CCTTGTACCTGATGTAAGTACTTTAAAAAATTGCGTAATTTTAGGTTTCT
TTGAAAAACGTGATGGTTGCAATTTAATACACGCTTTTTTTTATAAGAAT
AGTGTACTTTGGATTTGAGAGTTTTGGACTTTTGAGTGAACATTTGGGTT
AAAATTACATTTCTTCCTCAAAGCTTCAATTTATCTCTAACAAAGGAAGC
AGTTATTTCTGTTAACAAAATACAAATGACTGTATTCTTATCAAATTCTT
TGAAATTCACCCTGGAGGGTATTCTTAGGATACATTCTTACGATTTGGCC
ATAACTTTCACCCTGATATTCTTATAGAAGATATTCTTATAAGAAAAGCG
TGTATTAAGATAAACTTTTCATAAATCAGTTCTCGAGATTTTGATCGAAT
CAGTAAAAAAAATAATTTGAGAAAGTGCTGTTCATGGCATGCATAAGTTA
TGTTTTACATTTTCTTTTTCTCACAGGTTATTATAAAAATGATCGAAGTT
ACGAACAGAGTATCTCGAGTTACTGTAGAAAGATCTCTCTTACAATTGAC
GTTTGATGTATAA Coding sequence (CDS) from alignment at sc0000083_pilon:1171202..1174614- >XLOC_025621 ID=XLOC_025621|Name=XLOC_025621|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2394bp|location=Sequence derived from alignment at sc0000083_pilon:1171202..1174614- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGTGTTGAACCACTGGACAAGATCATTAAAACGTCAATCAAATCCAA
CATTACTCATTTTATGATGTGTGTTGAACCACTGGACAAGATCATTAAAA
CGTCAATCAAATCCAACATTACTCATTTTATGGATTGCTTAGCAGAATAC
GATTTGCCTGATACCAGATCCTTTGACAAACTACTGGCTTGGTCAGCATC
GTTTTTGTTAGAAGCAAAACTTGTCAAAAGCTGGTTGAAGAAGTGGACAG
AGCCTTCTTCTCTAGTTGATAAAGCTCTTGTCACACTAAAGATTGCTTAG
CAGAATACGATTTGCCTGATACCAGATCCTTTGACAAACTACTGGCTTGG
TCAGCATCGTTTTTGTTAGAAGCAAAACTTGTCAAAAGCTGGTTGAAGAA
GTGGACAGAGCCTTCTTCTCTAGTTGATAAAGCTCTTGTCACACTAAAGT
ATAGAGAAGTGCTGAATGTGGAAAATGTGGAAAGTCAGCCTGTGTGCTTT
GAGAGGATCACGCAATGCTTGTCATTCTCTGTTCTTCAAAGTAAAAAATA
TGACGACTTTTTTGAACGTTTTGGACTGGCATCTTGTGTCAAAAACTATC
ATCAATTATTGACTGTATAGAGAAGTGCTGAATGTGGAAAATGTGGAAAG
TCAGCCTGTGTGCTTTGAGAGGATCACGCAATGCTTGTCATTCTCTGTTC
TTCAAAGTAAAAAATATGACGACTTTTTTGAACGTTTTGGACTGGCATCT
TGTGTCAAAAACTATCATCAATTATTGACTATGAACCACAGGGGAGATGA
TATGATCCCACCCATAGAGGAGGAGCCAGATAAATTTGCTGCTGCTGTCC
TGGCTGATCCTTCGTTAATGACCGATGAACCACAGGGGAGATGATATGAT
CCCACCCATAGAGGAGGAGCCAGATAAATTTGCTGCTGCTGTCCTGGCTG
ATCCTTCGTTAATGACCGAAATCAGTAAACTGATTGGCATTGCTATCGAA
TGTGACCTTGTTATTGAATGGCATCGAGAAAATGATTGGATCAAGTTAGG
ACCATATTTGGCAGATAGGACCCCTCTTCGTGTTGGTGTCATCAACAAGG
AGTTCTGTTCTCTTGTGAAAACTGAGGATTTTTCTATAGATGTTTGCGGA
GAAAATCCATTTTGTATTTCCTCGCCATCATCAAACCAGATGACTTGTGG
TCAATGTGGGTTGAGATACCACATCACATGTGTCGGGGACGAGGATGAAT
GTGGGTGTAGGAAAATTGGATGGTTAAAAGAAAGAAATCAGTAAACTGAT
TGGCATTGCTATCGAATGTGACCTTGTTATTGAATGGCATCGAGAAAATG
ATTGGATCAAGTTAGGACCATATTTGGCAGATAGGACCCCTCTTCGTGTT
GGTGTCATCAACAAGGAGTTCTGTTCTCTTGTGAAAACTGAGGATTTTTC
TATAGATGTTTGCGGAGAAAATCCATTTTGTATTTCCTCGCCATCATCAA
ACCAGATGACTTGTGGTCAATGTGGGTTGAGATACCACATCACATGTGTC
GGGGACGAGGATGAATGTGGGTGTAGGAAAATTGGATGGTTAAAAGAAAG
AATCAAAAATGACATTCTTGACGTCAAAAGATTTGAACGAAATACCGAAA
AATCAGCTCATATTGCAAGGAATCAAAAATGACATTCTTGACGTCAAAAG
ATTTGAACGAAATACCGAAAAATCAGCTCATATTGCAAGGAGCTTTATCG
AGGATATTTGCCAAGGCAATATGAAAACAAGACGATCCGTTTCTATTGGT
TCCCTACCCTTAGATGTAAACAAATTTTTTACTTGTATGATGTTAAAAGA
ATCAAGCTTTATCGAGGATATTTGCCAAGGCAATATGAAAACAAGACGAT
CCGTTTCTATTGGTTCCCTACCCTTAGATGTAAACAAATTTTTTACTTGT
ATGATGTTAAAAGAATCACGGCAGCATGCGGTCACGTTCGTCACGCAACT
CATATTGAACGATGGGAATTTGCAACGTGTTGTTAAAGAATTTTTTCCAG
AATCGGAACTTGCAAACGTGATTGCAGATTGCCTTGTACCTGATCGGCAG
CATGCGGTCACGTTCGTCACGCAACTCATATTGAACGATGGGAATTTGCA
ACGTGTTGTTAAAGAATTTTTTCCAGAATCGGAACTTGCAAACGTGATTG
CAGATTGCCTTGTACCTGATGTTATTATAAAAATGATCGAAGTTACGAAC
AGAGTATCTCGAGTTACTGTAGAAAGATCTCTCTTACAATTGACGTTTGA
TGTATAAGTTATTATAAAAATGATCGAAGTTACGAACAGAGTATCTCGAG
TTACTGTAGAAAGATCTCTCTTACAATTGACGTTTGATGTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000083_pilon | genome | sc0000083_pilon:1171202..1174614 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1111-1197:88 |
| Aaloc | 985-1110:677 |
| Aaloc | 871-984:1181 |
| Aaloc | 802-870:1480 |
| Aaloc | 487-798:2135 |
| Aaloc | 391-483:2426 |
| Aaloc | 226-390:2840 |
| Aaloc | 67-222:3182 |
| Aaloc | 1-66:3414 |
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