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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000445_pilon:124894..130435+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_025494 ID=XLOC_025494|Name=XLOC_025494|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5542bp|location=Sequence derived from alignment at sc0000445_pilon:124894..130435+ (Clytia hemisphaerica_ch_hm2_pilon)
acATATCATACCAGATCGAAATCTGTTTCTTTGGAGGAAAACAAGGTAAA
AATAGTTTCTAAACTTCCATGATATGCACTAGAATTTGTCTTTCGCACTT
TACATAAGCACTAAAACCATGTACCttttaaaaaagtattgatataCTAA
AAGTTTCTAGTTCCTGAAAGTTTTTGTTGGAGTGTGTTTAAATGGTCAGG
GtatcttttttgtttcctttcttttttagttCGCGCTTGCACAACAGGTT
TGCAGAAACAAAGAAGATCCTGAGTATTTGATCAAATTATGGATCGATGA
ATACATAGGTaactttgaagaagaaaaatttagcCATAAGTTATGAAGTA
GCTCCTCCTCAACATTCAATTGATTATGGTATTCAGGATTTGTATCGGGT
CAGACTCACGTGAATATGAAGTTATTCTGAAACTTCCAAGGAACTATTTG
TGATTAACGTATATATTATCATTTTCTAAAGGTTATGGTGTATATGTATT
GAAAGACTTGGTCAAGGGTGAGTTCATCTGTGAGTATCCAGGTGAACTCA
TTTCTGACACAGAAAGAAACCTACGTATTGAACAATATGACCAAGAAGAC
TTGGGTTCCTATATCTTTGATGTTCAGATCGAAAATAAGAAGTATATGTG
AGTGAATTAACTAATCTTAAAACACCTATTATAATACTTAATGTGCTGAT
TTTTGTTTGTCTTCAAGTACGGTTGAGAATCATGGCCCAACATTAGACGA
TCCTGAAACTTTagggaaaattgaaaaactggTAATCCGATTCATCACTC
TGAAAACCAGGATTAGAAAAGGAAATTTCACTGTGTAACTCCAAATACTG
TCCATTATCTTTCAAGACCAAATTTAGGGAATGAAATCtacaaataaatt
catttacgACCAAGATTAGGAAAAGAAATCTTACCGAGCATTGATTTGAA
TGAATTGAATATACAACTGTTAGTATTGTGCTGGAATTATCTTTTGGTTT
TCAATCTTTCTAGTCTCGATGCAACACGATCAACAAGGATAGGGAGATAT
ATAAACGATAGCCCTCCAAGACACATTAATGCTCTTCCAAAGGTTATCCA
TGTCGACCAGAAAGtatatttgtgtttttttgcgGCCAAAGACATACCCA
AAAACACAGAAGTGAGATATAGCTATAGCTCCAAAAATCTCACCTGGAGA
TCGAAGGTAATTTACTTTTGTAATACTAGAAATGATTTTCTTATACCATT
TTTTAGGTGTCTTTTTGCTAGGATGTTGATAGTTTGTATCTAAATCAAGC
TGGAAGATTTAAACTACTCAAATTGAATAGAGAGCTGATATGATTgctac
ttttcaatatattttaaagctAGTTAAAATTGCGATAGGAGCTACCTACT
AGAAACCAGATTTTGATCGATGCATATTATATTTCTTTCACGGCCCTTTT
GGCGAATTGCTACCTATAATATCAAATAAATCAGGAATATATCTTTTCCT
TTCATGAGCATTGTACTTATAAGCACCGGACTGAAAATGATCCAAATGTT
AAGCATACCGGATGCGGCAAGAAAAAGTATACAAGTTTTTCAAGATATTG
GAGCTTTAGGATAAGAGTTGTTAACTTATTGTCTTTTCATTGTTCAGAGG
AAAGACTAACGCAAATTTTTGTGTATAAGACAAAAGTTAATAATAAGGTA
AATCgataaaattgcattttttggtaaatATTCATCTTAAAAGTTGTCCC
CGCCTCTAAAAATATAAAGATTATCTAAGAAAAGGCGCAAAATCAGGGAG
TCAAAGTAGAGTTATGGTAGCATTTTGAGAGTTTTACTAGAGAATTGGAT
Gtttttttgttgagtttttagctatttagcaaaaaatttggtagttttat
ggaaaatttcactttcttcGCAAAGTTTGAGCTTTAGTGAACTTAAATCA
TCCATTTTACAGTTACCAGTTGAAAAATCTATTCTTTTTAAGGCTATTCT
ACTGTTTAAAGGGCCACACCaccgaaaaacttttttccaaatatgTTTTT
AATGCACTCAGGGATCACGAAACAAAAAGTCCTTTTTAGAATTGGGCTCT
GGACATACAATTAAAGTCGAAATAAATTGAGAATTTTGCATATTTCCAcg
tttttcgaattttgaacTTCGGGCGAGAGGgttgattttgggctatctct
tgaatgtaatcgaatatttcaattttggcggttttggcagacttccaggt
tatattctgagccttattggaccatttttgaactttcggatcctcagatc
ctaagctcctcagtcttaagtctagcgttaaaactcagaggtaaaactct
acccttccaacctactttagagcagttccaaatcgtttgtggttatgaAT
TTTCGAGGgttaatttcccttttttctcaaatattatgactttgttGATT
CTACCCAAAAGTCAATTATCAAACTTTGCATCAAAACCTTACTCAAAGTA
TCAATTTTGATATTTAGCACAAAACTGCGTTTACAGAATTTCTTGTAATG
ACTTCGTTCAATTGCaaaacacaaaaagtaattaaaaacttaaaaactag
aaaaaagttatacattaatctttttaaaatgtagaaattgccatttaagt
tggggtaaaatcaaaaaataaggtTTATCTAGAGCCGATAACTTCTACtt
tttttCACAATCTCGtctcaaaattcacaaaaaagcttcaaaaaacgacc
ccttttgaaaaaaatcttttttaaaattaaGTCAAACATAATAAGTCAAG
ATAAAGTGTGAACGCagtaaatcaaaacagaaaacacatttttcttttag
aacGATATTTCGACATACGTTTTTCAAGTAAGGAGAAGTACATGAAAAAG
GAATGTAAGTGTCGAAATAttgttccaaaagaaaaatgtgttttttgttt
tgattttttaaaattaatgtATTCTGACGACACACTGAGGATAGAAACTC
tctctattttttcaaacaagtGTTTTTgcagtagtattagtggtagtagt
agcagtagcagcagtagcagtagcagcagtagcagtagcagtagcagtag
cagtagcagtagcagtagcagtagcagtagtagtagtagtagagAAATTA
TGCCCTTTTGCTTTGCTTCTTATGTTCCTGGGGAAGGTACTAGGCAAAAA
GAGGGTACAGGTATATGCTGCCCTTGAGTGTCCCtttttttACCTTAAAA
ATCCCACTGAGAATCGCAAAAATCACGAACTTTAAATCCAGTCCCTCTAA
GGGTTGTTAAAACAGCTAAATACAATTTCTCGACCCTCAAGTTAAATATT
CCAATAAAGGGTTACATAATTCGTAAAAAGTTGGGTTTTTCCTGGCTTTC
AGTCCCATTAAGCTCTGTTTTAGCTCCTCTATGGGCCTAATCACCAAAGG
TCGGACGGCACCTTCCCATTATCTTGCAAAACTAGTACTTCTTGTGCTTA
TGGCttcatctatcaagagttatcaaGACTTAAAATGATTCGGTACTGTT
CAGCTTTCAGTTacaaaaagaaatggaaaaggAATATagagtttaaattt
tttcaacttcCAAATGAAACGGGATTGCGAAAAATGGCTTTATAACATAT
CTGAAGGGAAGGTTCTTAAAGATGAGAAAAACTTTTACATTTGCTCGAAT
CATTTTGAGGAAAGCTGCTTTAAACGAGATTTACAGTTAAATGTTCATGT
TGTTGcttgtcttctttttcttctctaGACGGATTTGATAATTAGACAGG
ACTGTGTCTTTCTCATAAATATTAATTTACGctgatttctgatttctcta
TCAATGCCAAAAAATTCCTCCGAGTCTTCTTCTAGGCTGAGTTATTGGGT
GAGAATTAATAACACAGCGAAATCATCGCACAGATCTTGCAGCTCATTGA
AATTGTCTTCAGTGTCACTGATCGTTGTACTAGAGGAATCACTAGAACTA
TTTTCATATTCCTCTGacatatttttacaatttataaCACTTAAAATCTC
ACAATTGAAAACTTGAGAGATTGATTTCCTCAGAACTTCaacttttgaac
atttttcaaaaaccctTTAATCTTTCTCTCTATACATGTCGCCAAATAAA
AGATCTTTGATATCCTTTTAAGTCTTGTTTACAGGTTCGTTTATTCAACA
ATTTAATAAATAATGTAATTTAATGTtattcaattcttctttttttattt
aatatacTCTGGACATCTTTTCTGCCTGTTTAGTGGACTTTTTACCAATC
ACATAGCCACATATATAACAATTTCAGACAGTTTTAGCTTAAATATACTT
AGATATACTTTAGTTTAGATATACTTtgtagaaaaattagattttcaaAT
CTACGTCACTCGTACCGAGACTCCCATTTTCCGCAGCCTTGCGAAAAAAG
CTTAGATTTGAGAAATCTTTCATGCTCGATATCAATAAAAATAGAATCAT
TTAAAACCTTTTATCTTAAAGCTCAGGACATCTTGACAAACTTGTATACT
TTTCTTGGCGCACCCGATACACCTAGCATACCTTCAATCATTGAACCTCG
GAGCTATTTGAATGAAAAGAAACGAATAAGCACGGCGATCTTGTACGCGT
ACCTTTAGCGGTTGCATTTTGAAATACCAAATGGCCAAAAATAATCTTAC
ATACATTTGACCAGTGCATTTAATCCCTAAATATGTTTACGACCATTGTA
CTATATAAATTTCATCATTCCTCCCATAAGAACGAAATggcatcaaaatt
taaattctccAAATAGTGATTTTAGGTAGGGATATATCCTCCCCAGTTCT
TCCTCATTCGGGATATTTATCTTTGGGAATCAACTAAGAATAGAAATTAT
CActgggaaataatttttcttgcaGGAGTTCCAAGAGCATTGTTGTGAAT
AAATGTCATCGATTGAGACATTGTTTTGAACCAAATAAAAGATACTTTTG
CAATTTTCTAACATCCATactttgaaatttgagaaactACGCAAATGTCT
TGCTTGCGTGTGGTAAAACCAAAGATCGCCGTGAAGAttgaaaaagaagt
ttttttcttttaaaatacatCAAACATAATATAGTGCGATACTGAACTTT
TCTAAAAGATGTCACGAATGTTTGAAATGGTCGTGTCACTATTCTTCGCT
TATATCGTAATGGTTTTTTCGAAAGCAAGGCTTAATCCTATTCTTTCACT
AACTGGTTACCTTAAAAGAATAACTTTATGCAAGAACTAATAAATGCGGA
ACTAATTAAGGATGTACTTAATTAATCCAATTACAATCCAGGCAAACGAT
AGAACTTGTGCTAGGAAGCGATGcattccattccattatattttccggtt
ccaaacttattttttcatatttatcaattttttttcacagtttattcttt
tcttttcttaggCACGTTATGCTCGACCTATCAATTTGAAAGAATCACCT
GAGACGACAGATGATATTACTAAAAACTCCATGGCTAATTGA Coding sequence (CDS) from alignment at sc0000445_pilon:124894..130435+ >XLOC_025494 ID=XLOC_025494|Name=XLOC_025494|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1128bp|location=Sequence derived from alignment at sc0000445_pilon:124894..130435+ (Clytia hemisphaerica_ch_hm2_pilon)
acATATCATACCAGATCGAAATCTGTTTCTTTGGAGGAAAACAAGacATA
TCATACCAGATCGAAATCTGTTTCTTTGGAGGAAAACAAGttCGCGCTTG
CACAACAGGTTTGCAGAAACAAAGAAGATCCTGAGTATTTGATCAAATTA
TGGATCGATGAATACATAGttCGCGCTTGCACAACAGGTTTGCAGAAACA
AAGAAGATCCTGAGTATTTGATCAAATTATGGATCGATGAATACATAGGT
TATGGTGTATATGTATTGAAAGACTTGGTCAAGGGTGAGTTCATCTGTGA
GTATCCAGGTGAACTCATTTCTGACACAGAAAGAAACCTACGTATTGAAC
AATATGACCAAGAAGACTTGGGTTCCTATATCTTTGATGTTCAGATCGAA
AATAAGAAGTATATGTTATGGTGTATATGTATTGAAAGACTTGGTCAAGG
GTGAGTTCATCTGTGAGTATCCAGGTGAACTCATTTCTGACACAGAAAGA
AACCTACGTATTGAACAATATGACCAAGAAGACTTGGGTTCCTATATCTT
TGATGTTCAGATCGAAAATAAGAAGTATATTCTCGATGCAACACGATCAA
CAAGGATAGGGAGATATATAAACGATAGCCCTCCAAGACACATTAATGCT
CTTCCAAAGGTTATCCATGTCGACCAGAAAGtatatttgtgtttttttgc
gGCCAAAGACATACCCAAAAACACAGAAGTGAGATATAGCTATAGCTCCA
AAAATCTCACCTGGAGATCGAAGTCTCGATGCAACACGATCAACAAGGAT
AGGGAGATATATAAACGATAGCCCTCCAAGACACATTAATGCTCTTCCAA
AGGTTATCCATGTCGACCAGAAAGtatatttgtgtttttttgcgGCCAAA
GACATACCCAAAAACACAGAAGTGAGATATAGCTATAGCTCCAAAAATCT
CACCTGGAGATCGAAGgCACGTTATGCTCGACCTATCAATTTGAAAGAAT
CACCTGAGACGACAGATGATATTACTAAAAACTCCATGGCTAATTGAgCA
CGTTATGCTCGACCTATCAATTTGAAAGAATCACCTGAGACGACAGATGA
TATTACTAAAAACTCCATGGCTAATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000445_pilon | genome | sc0000445_pilon:124894..130435 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 484-564:5462 |
| Aaloc | 292-483:1015 |
| Aaloc | 127-288:484 |
| Aaloc | 46-123:230 |
| Aaloc | 1-45:1 |
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