XLOC_025445.2 (mRNA) -

Overview
NameXLOC_025445.2
Unique NameXLOC_025445.2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000049_pilon:1039076..1040141-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025445.2 ID=XLOC_025445.2|Name=XLOC_025445.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1066bp|location=Sequence derived from alignment at sc0000049_pilon:1039076..1040141- (Clytia hemisphaerica_ch_hm2_pilon)
GTTATTGTATCAGAAGTGCCAAACATTATTTTAGATGATGAAAATGCAAT TTTAGCTCCAGGTGAAGGTCAAACCCCCAATTCATTAACACAAGATGAGT TCTGTGAAGAGCTAGCCCATCCTCATCTTTTTCCTACTGGGAAATTTGGT TATAACGTAGAGCGAGATATAAAATTGTCGCCAACAAAGTACTTTAATCA GCGTCTTTTAAATTACACTCAAAAGTTTGCTTCGGATTCAGATTACATTT TTTTTGCTCACAAAACTTTACTACAGCTTAACCTTAGAAGTAAGATCAAT ATCGCAATGAGAATTTCAAATTCCAACTTGACTGCGGGACTATTAGCAAA TAATTTTAATGATACAATTCAAAATTGTGTAGCATCTGATAATGCATACA AGTTTATGAGTACTATTAAAGGAACCCCTGCATACTGGCAACATATGTTA TCTGATGTTCTTGCAATGGTTAAACAACTTGGTGTCCCAACATACTTTAT GACTCTCTCTTGTGCAGATTTACGGTGGGAGGAATTTGTTACCATTATCA GACAATTAAGCGGGGATGCTGATACTGATCATGAACTTCTTGATTACCAA TCTAGATGTGCCCTACTTAATAGCAATCCTATTGTGCTTGTGCGTCAATA TCAATATAGAAAAGAGTTGTTTTTCAAAGAGATTATAATGGATGGCCAAC TTGGAAAAATTACATACTATGCTCTCAGAGTAGAATTTACTTTCAGGGGT AGTCCACATGATCATTGTTTGCTTTGGGCTAAAGATGTCCCAAAACTTGA AGATGGAAAAGAAAAGTATATTGAACACATAGATAGTGTTATTTCTGCTA ATGTTCCTGATAGGGAAGAAAGTCCTGAATTATGGAATTTAGTCACTAAG TATCAAATACACTCCCATTCAAGAACGTGTAGTAAATATCGCAAAAATGA ATGCCGATTTCAATTTGGAAAACTTTTCTGCAAGCGTACTATTTTGTCTG AACCGCTTCCTGAAGGGTTACCTGAAACTGAAAAACATGATATTTTGGTT GCTAGAAATAATGTGA

Coding sequence (CDS) from alignment at sc0000049_pilon:1039076..1040141-

>XLOC_025445.2 ID=XLOC_025445.2|Name=XLOC_025445.2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=612bp|location=Sequence derived from alignment at sc0000049_pilon:1039076..1040141- (Clytia hemisphaerica_ch_hm2_pilon)
GTTATTGTATCAGAAGTGCCAAACATTATTTTAGATGATGAAAATGCAAT
TTTAGCTCCAGGTGAAGGTCAAACCCCCAATTCATTAACACAAGATGAGT
TCTGTGAAGAGCTAGCCCATCCTCATCTTTTTCCTACTGGGTTATTGTAT
CAGAAGTGCCAAACATTATTTTAGATGATGAAAATGCAATTTTAGCTCCA
GGTGAAGGTCAAACCCCCAATTCATTAACACAAGATGAGTTCTGTGAAGA
GCTAGCCCATCCTCATCTTTTTCCTACTGGTATCAAATACACTCCCATTC
AAGAACGTGTAGTAAATATCGCAAAAATGAATGCCGATTTCAATTTGGAA
AACTTTTCTGCAAGCGTACTATTTTGTCTGAACCGCTTCCTGAAGGGTTA
CCTGAAACTGAAAAACATGATATTTTGGTTGCTAGAAATAATGTGATATC
AAATACACTCCCATTCAAGAACGTGTAGTAAATATCGCAAAAATGAATGC
CGATTTCAATTTGGAAAACTTTTCTGCAAGCGTACTATTTTGTCTGAACC
GCTTCCTGAAGGGTTACCTGAAACTGAAAAACATGATATTTTGGTTGCTA
GAAATAATGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_025445.2XLOC_025445.2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000049_pilongenomesc0000049_pilon:1039076..1040141 -
Properties
Property NameValue
Aaloc142-306:166
Aaloc1-138:1067