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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000351_pilon:21660..25986+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_025417 ID=XLOC_025417|Name=XLOC_025417|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4327bp|location=Sequence derived from alignment at sc0000351_pilon:21660..25986+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAAACCCTCACGGAAAACGAAGAGGAACCCGTTATTTGTTCTCTAA
GGGATACAAGAAGAACGGTATGATATGATACATGTGTTATTCGACCAAAC
TATTATTAGAAACTACCCTCTATCAGACTTTCCTCTTTACATTAAATAAG
TTGATTTCAAGATGAGAACATGGTTGTGATCTGCCGTCTTTATGCCCTAC
AGGGCCACTCGCTCACAATCCTTTTCGATATCTGTCTGTTAGGCTGCGGT
CACAAATGAGTTGTGTTCGCGTCCTATGACTGACTCGCTTTCTATCTTGA
ATATCTGACCTTTTTCTAGTcggaaaatttgtcagattttttAACTATAT
TATTTAAAGAGTTTTGTAGATTCAGCGTAGCCAGCattttgatcattgag
tatttttataatttttatctgcagtttttcgaagattttttttaaagcgc
TACACGACTGCTTTTtatacatatagtatacatctgactatatatctata
gtatatataCATCCAAAATAATCACATTGCAGCTTGTTCGCTCAACGATT
CTTGTCTCCTGGGGGCTGTATAGACccctttcataattttttggcttgtt
ttgattttctcgctTAGTCTTCTTTTCTGTATCGTCTTTCTTAACAAAAT
CTGGAATAAAAGAGACAGAATTCAGAGGCAAAGTTTGAGTCATATTGCCT
CTATCATCCaaatttgtaatatattttatttaggcTAAACAAGGTAATCC
AAAACATATGACATCACATGAAAGGGGTCTATAGTGAATTCCGAGGACCA
GGTTGACAGACTGTCTAGGCCTGggcccaattgatagtttggttcgatct
caatcaaacggaatcaACAATTGAACCAGTTGAACCAAATCAACGATCGA
ATcagtcgaacgcaatcgacagATTCAAATTCGATTGTCGTCTGGTCCTA
CTGACtctaaattttttcagaaaaagtgttCCCCTTTGagttagaaaaat
caaagaaattttacctCCTTTTCACATGATAAACTACTATCTCTGGGGTT
CTTTATTAACTAACTGCTTTGATTCTTCTATTAACAACATCCAATTTGCA
CAAAAAATGTCCTGGTGTAACccgtacttaaaaacaaatattaggCACCT
AGCTAAAAGCAGAGAGTTACAGCTGCATTCTTTTAAAAAGTACACGCCGT
GAACGTCTTAATTATCaggagacgggtgtaattatctcgtgaacgagcaa
actgcgcatgatttgattgctcccaatggaaagagcacaaaaaattgatt
ccatatggtgattttcagaaaaatccaccggtggaatcaatcacaattct
aataatccataagaaccaatcagaagtaagaatctgtcttctgaacagaa
gcgtctcaaaaagaaaaatggcggacatgaaaaaaatcaagaggggcttc
cttgtagtgctttatattaggattgtgatcgattgcaccgagaaattttg
ataatttttttaaaactttaccaattcgaggctgctctttccattaaaac
tagtttcataatgcgcggaaaagcctaaagcccttaaaattgagatcaaa
gttttatgtctcctaattaggagacgggtctcctaatcaagcgaccccaa
gcgacgtacatgtctcctaatcaggaggcgtctcctaataaggcgactgt
tcctgactgtcTAAGTGTAGAAGTTATCTTAAGTTCGCGTTGCGTGCCTT
TGTGGACCTGGGTTTTAGGCTATTGTGGTTGGATTTCAGGATTGCACAAT
GACTTGaggaattttaaaaattgaggtttttggtgggaaaatgaaaaaag
gctTCTAATTTTCGACCaacccatttttcaaagcttctaggacacgaacc
aaacaatcGATTGGGCCTGGCCCTACATAAATGCAAAGAACAACAGGCCG
TTtatttttaaattccattttataatacaatttttatattgactgaatgt
ttagttttccctttttCTCATTGCAGTAATTCTTTTAGTAAGTCTATCAA
GTTATAATTTCACATTTAGTACTATTTTCCCTTGCATTTCTTGtttcttg
ttaatatttttctggatttttcaGGTGTTGAACATCTCTCCACTTATTTG
AAGGTTTACAAAGTTGGTGATATTGTTGATGTTAAGGTAAACAACTTAAA
CATGTTTGTTAGCTTTCAAATGAACCCCATTAGTATTAGGCCTTTTGGGG
GTTCCTACTCTCAAGGAGTTAGTTTCCACCATCcttgtataacttttgat
ctaggaaAGCTTATGGACTTGAAACTTGGGcagaaaattttctttagcaT
AAAAGGaaatcatagaaaaaaattggttATGACTTCATCACAAAGCTTCA
CAATCACCCCTCACCAATGAAAGCTGATTTAAGTTGAACAAATAAAGATT
CTTTAACATATTTGAcagtttcttattttccatttaagactttgtgtaaa
atctatgctgaagatgggtcaattttgtcatcaatcattttcaatttttt
ttttaaattaacatTGAAACTTGAAAGAAACACCTattctgtttaaagat
tctgaaagagAACTTTCAagaatctttaaacagaatctaaatatatTTTT
CGGCTATCGAATGCTGCCCCTCCTGAATTAACTTAAGTTTTGCTTAAgac
agcctttttagtggaaaaaacagtagaaaaagttcttccttcgtttcaag
cataaaactcctactctttgttttgaatattgaaattctccggataaCAA
GCATGCGCACTGggcttttaattaaaaaatagaGACTTTcaaaacctaag
ccaatcagctgtgttttaaacattcttttattcaAAATCTCAATTGATAA
CagttgataaacatcttttgtcaATAGCAGTGCCTATAAACAAAGAGTAA
GGTCCAAAAGCCTAAGAGCCTGTCTATTCTGTAGACTAGGATCATCTGTG
CTAACAAACTTCACTACATGTTCtttttttAAGCGTACAAAACCCAAAAG
CTGGCACGGAAATGCTTAGATCAAGAGATTTACGAAGCTGAAAGATGctt
tgagggatgcttatatcctaagtAGAATATCCTTAGAGAAATTTCGAATA
ACCAgccaaaaataaacaaattctgAAAAGGAGGGCTCAAAGTAATGTTT
AGCAACTATAACCAGCTTCAGCTCATTTAATGTTATTTTCTATATACTAA
TAAACAGTAACTTAGtaataatccaattttttttccattttagggAAATG
GTGCCTTCCAAAAAGGTATGCCTTACAAATTTTACCATGGCAAAACTGGT
CGCGTTTTCAACGTTACACGAAGAGCTGTTGGTGTTGTTGTAAATAAACA
ATTAGGGTAAGGTAAATAATTCTCTTTCGCCTTGCACATCGACCTTACCA
ATTTGTCTTGAAAAATTGTCAGTTTTGATCATAATACAATGATGAAGCAA
AATTATGAAGGACTTGTTAGGCAGAAGCCTGCAAAGGCTGAACCCACTGT
TATTTTCAAGATTCTTGTTATATCAACTGCAATTTTTGCTGTCTGAGTAT
TATCTAATAAgtatttttcacttaaaaactatttttcactttttagctAT
TAACTGTGAGGGTCATTCATAATCCACACAGTACACACTCAGTGAAAGGG
agaatatattatatatatgaCTATGTGAAGAAATCGagatttctgtccaa
ctatattcacccGGGAGATTGTTATAAGGCATCAGAAGTTGAGTTAGTTC
TTGGACAATTTTCTTTGACATATCATCATTGTTTAGGCTTCCAGCTATAC
CTTGTTGTAATTTTTGTAGGAACCGTATCATTCCCAAGAGAATCAATGTC
CGTATTGAGCATGTTCGTCATTCAACATGCAGAGATGATTTCTTGAAGTA
AGTTTATTCGAATGTTTCATTAAAAGCGATTCTTTTGTACAGGCACTCAG
CTGTGATGATTATTCTTTATGAAGGACTTGTTAGACAGAAGCCTGAAAAG
GCTGAACCCACTGTTATTTTCAAGATTCTTGTTATTTCAAACGCTTGCTT
GAAAGCAGTCTGAGCTTTAAAAAGTGTCAACAAGGTgtttctctttgaaa
aacattactagaaatatgaaatttctgTATACAGATTATATCTTTCATTT
TAGCCGTGTCAAGGCTAATGAAGTCAAAAAAGCCGAAGCAAATGCCAAGG
GAGAAAAAGTCGATTGCAGAAGATTGGTAAGTGAAAATATCCATCAGTTT
CTAATTCAATCTTCTTTAAGTATATAG Coding sequence (CDS) from alignment at sc0000351_pilon:21660..25986+ >XLOC_025417 ID=XLOC_025417|Name=XLOC_025417|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=888bp|location=Sequence derived from alignment at sc0000351_pilon:21660..25986+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAAACCCTCACGGAAAACGAAGAGGAACCCGTTATTTGTTCTCTAA
GGGATACAAGAAGAACGATGACAAACCCTCACGGAAAACGAAGAGGAACC
CGTTATTTGTTCTCTAAGGGATACAAGAAGAACGGTGTTGAACATCTCTC
CACTTATTTGAAGGTTTACAAAGTTGGTGATATTGTTGATGTTAAGGTGT
TGAACATCTCTCCACTTATTTGAAGGTTTACAAAGTTGGTGATATTGTTG
ATGTTAAGggAAATGGTGCCTTCCAAAAAGGTATGCCTTACAAATTTTAC
CATGGCAAAACTGGTCGCGTTTTCAACGTTACACGAAGAGCTGTTGGTGT
TGTTGTAAATAAACAATTAGGggAAATGGTGCCTTCCAAAAAGGTATGCC
TTACAAATTTTACCATGGCAAAACTGGTCGCGTTTTCAACGTTACACGAA
GAGCTGTTGGTGTTGTTGTAAATAAACAATTAGGGAACCGTATCATTCCC
AAGAGAATCAATGTCCGTATTGAGCATGTTCGTCATTCAACATGCAGAGA
TGATTTCTTGAAGAACCGTATCATTCCCAAGAGAATCAATGTCCGTATTG
AGCATGTTCGTCATTCAACATGCAGAGATGATTTCTTGAACCGTGTCAAG
GCTAATGAAGTCAAAAAAGCCGAAGCAAATGCCAAGGGAGAAAAAGTCGA
TTGCAGAAGATTGGTAAGTGAAAATATCCATCAGTTTCTAATTCAATCTT
CTTTAAGTATATAGCCGTGTCAAGGCTAATGAAGTCAAAAAAGCCGAAGC
AAATGCCAAGGGAGAAAAAGTCGATTGCAGAAGATTGGTAAGTGAAAATA
TCCATCAGTTTCTAATTCAATCTTCTTTAAGTATATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000351_pilon | genome | sc0000351_pilon:21660..25986 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 322-444:4205 |
| Aaloc | 244-318:3871 |
| Aaloc | 130-240:3294 |
| Aaloc | 70-129:2127 |
| Aaloc | 1-66:1 |
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