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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:401693..403760- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_025395.4 ID=XLOC_025395.4|Name=XLOC_025395.4|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2068bp|location=Sequence derived from alignment at sc0000001_pilon:401693..403760- (Clytia hemisphaerica_ch_hm2_pilon)
CTCTTTCCCAGAATCAAGATCAACTATGACTATATCGAGGTCAAAAACAA
CCAATACCTGAAATTATCAAGCAGGGCCTACGTTGCTTGCCCATTCACTG
ATGATGAGTTTGGAGTGATAAGTCCTCGTAACTTTTTTAATTTCGACCCA
TTCCGAACCGAATGTCACGGAGGATACTTGGCTTCTGCAATCGCCCACTG
GTTCCCAAGTCTCCCCGACCAAGTGGACCTCGCCCATCGGATTTATCAAT
GTCTCCTTTGTCATCAATTTCCAGACAAAACCAAGAAATTGACATTGGTT
GGAAAAATTGATTCTGGCAAAACGTCACTGATGAACCTCTTTTCATCAAT
CATCCCGAAAGAAAAAATCGCCATTTTGACAAAAGAAAGCACTTTCGGTT
TGTCTATGATCAACGACGACACGGAGCTTCTGTTTGTGGATGAGTGGTCA
AAGGAGATGACACCACCTGACATTGCTAAAACCCTATTTCAAAATGGAAG
ATTCCCCCAAGCTGTCAAATTCAAAACGCCGAGAATGCAGACCATGCAGG
CGGGTGTTTTCTTGACCTGCAACGAAAAGCCAAAGTTCGACACTCAGTGT
GACCAAGAGTCTGTCGAGAGGCGATTGGCAATATTTGAGACACGGGCTTT
GAGCACTCTTGACCCTGCAGCCCCTGGATGGATCAAGGATAATGCCATGA
ATTGCTTAACGTACATCATGAACCTGGTCAACAACAACATTGAGATGATT
GACAAGGACGACTTGTCCTACACGCTGCCGGTCAACGTTAAATGCGAGTC
CACTGTTTTAAAAGAAAATCTCGACCAAAAGCAATTAGAAGGGATCCAAA
CGTGTTTGATCGATCAAGACAAGTCTGTTGGGTTGGCAGAATCGCCCATC
GATGGATTGGAAATCTTCCATCTAGAAGAATTTGACGTTGATAGTAAGTG
ATCATTTTTCGTTTCATTTCCTGGTCTTTAGATTCTCTGTGATATCTTCA
TATGTTTTTAAAATGACTTTGCCCATAAAGTTCCATGGAAGCCAGATGTA
TTTCAAAATATACTTTTCGCTTTTCTCAGAACAATCGGAAACTTGTGGAT
CACAACAGCTTGACGACGTAGATTTAGTCACAACTAAACGTCCAATGAAG
GATGGTATGTCTAATTTTTGTTTTGAAATTTTCCTCAAATGGCCTTATTT
AATCATGGCAGATTTTATTCAGCTCATTGGCTTACACACAAGTCTATCTT
GAAAGCTTGATAGTACGACATTTCGTTAACATGAATGAACTTCAGCGGAA
GCATATTTGTGAACAGTTCTTTTCGTATTTTCTCTCAGATCAATTCGACA
CGGAATCTCTTATCGGGTTCATTTCCACAACAGATGTCGACTCGGACATA
GAGCCCCCAAAGAAACGTGCACGTAAAAACTGGTTCAACAGCCCACAACG
AGAGACCGACAAAGACGCTGTGGAAAGTGTTGTTGAATATCTCGTACGAA
ACGGTAAGAGCACTTTTTTGATGGTCTTTGTAATCCAAATATGTTGCTTT
GCAGGTATAAAGTAATTTAGCTTTAGTTCATTCTCCATGCAGCTTCAATT
TTTAAATAAGAAATTTTTGTTATTTCAGTTTCATCAAAAGACGTCAATGG
ATCATCGACGTTGAAAACACAAACTAATACAATGCCTACACAGGATGGTA
AGTGAACTATTTACGCTATCTCCAATTTTTGAAAACAAAGGTGCTCTGAT
TGGCCCAATTTAAGACAACACATAACAACTTGTGGTCCCACAAAGTGAGA
AAAGTTTTTTCTCTTTTTAGCGGTCGAAAGTCCCATCAAAGACAAAACGT
TCATCAAGTCACCAAGACGCTTCAAGGTGGAAGATATCAATAAACCCGAG
TATTGGCGTATGGTTCGTTCATACCTTCATCACAACTTGAAATTCAAGAC
GTTAAATGGACCTGTTGCTCACTCCTTGTTTCGTCTCTTTGAAAAGTTTG
AAGGTGCATTGAAAAGTCCTCGACCACCAACGATGGCTGATCCAAAGCTA
GATGCTTCATTCTTGGTT Coding sequence (CDS) from alignment at sc0000001_pilon:401693..403760- >XLOC_025395.4 ID=XLOC_025395.4|Name=XLOC_025395.4|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3000bp|location=Sequence derived from alignment at sc0000001_pilon:401693..403760- (Clytia hemisphaerica_ch_hm2_pilon)
CTCTTTCCCAGAATCAAGATCAACTATGACTATATCGAGGTCAAAAACAA
CCAATACCTGAAATTATCAAGCAGGGCCTACGTTGCTTGCCCATTCACTG
ATGATGAGTTTGGAGTGATAAGTCCTCGTAACTTTTTTAATTTCGACCCA
TTCCGAACCGAATGTCACGGAGGATACTTGGCTTCTGCAATCGCCCACTG
GTTCCCAAGTCTCCCCGACCAAGTGGACCTCGCCCATCGGATTTATCAAT
GTCTCCTTTGTCATCAATTTCCAGACAAAACCAAGAAATTGACATTGGTT
GGAAAAATTGATTCTGGCAAAACGTCACTGATGAACCTCTTTTCATCAAT
CATCCCGAAAGAAAAAATCGCCATTTTGACAAAAGAAAGCACTTTCGGTT
TGTCTATGATCAACGACGACACGGAGCTTCTGTTTGTGGATGAGTGGTCA
AAGGAGATGACACCACCTGACATTGCTAAAACCCTATTTCAAAATGGAAG
ATTCCCCCAAGCTGTCAAATTCAAAACGCCGAGAATGCAGACCATGCAGG
CGGGTGTTTTCTTGACCTGCAACGAAAAGCCAAAGTTCGACACTCAGTGT
GACCAAGAGTCTGTCGAGAGGCGATTGGCAATATTTGAGACACGGGCTTT
GAGCACTCTTGACCCTGCAGCCCCTGGATGGATCAAGGATAATGCCATGA
ATTGCTTAACGTACATCATGAACCTGGTCAACAACAACATTGAGATGATT
GACAAGGACGACTTGTCCTACACGCTGCCGGTCAACGTTAAATGCGAGTC
CACTGTTTTAAAAGAAAATCTCGACCAAAAGCAATTAGAAGGGATCCAAA
CGTGTTTGATCGATCAAGACAAGTCTGTTGGGTTGGCAGAATCGCCCATC
GATGGATTGGAAATCTTCCATCTAGAAGAATTTGACGTTGATACTCTTTC
CCAGAATCAAGATCAACTATGACTATATCGAGGTCAAAAACAACCAATAC
CTGAAATTATCAAGCAGGGCCTACGTTGCTTGCCCATTCACTGATGATGA
GTTTGGAGTGATAAGTCCTCGTAACTTTTTTAATTTCGACCCATTCCGAA
CCGAATGTCACGGAGGATACTTGGCTTCTGCAATCGCCCACTGGTTCCCA
AGTCTCCCCGACCAAGTGGACCTCGCCCATCGGATTTATCAATGTCTCCT
TTGTCATCAATTTCCAGACAAAACCAAGAAATTGACATTGGTTGGAAAAA
TTGATTCTGGCAAAACGTCACTGATGAACCTCTTTTCATCAATCATCCCG
AAAGAAAAAATCGCCATTTTGACAAAAGAAAGCACTTTCGGTTTGTCTAT
GATCAACGACGACACGGAGCTTCTGTTTGTGGATGAGTGGTCAAAGGAGA
TGACACCACCTGACATTGCTAAAACCCTATTTCAAAATGGAAGATTCCCC
CAAGCTGTCAAATTCAAAACGCCGAGAATGCAGACCATGCAGGCGGGTGT
TTTCTTGACCTGCAACGAAAAGCCAAAGTTCGACACTCAGTGTGACCAAG
AGTCTGTCGAGAGGCGATTGGCAATATTTGAGACACGGGCTTTGAGCACT
CTTGACCCTGCAGCCCCTGGATGGATCAAGGATAATGCCATGAATTGCTT
AACGTACATCATGAACCTGGTCAACAACAACATTGAGATGATTGACAAGG
ACGACTTGTCCTACACGCTGCCGGTCAACGTTAAATGCGAGTCCACTGTT
TTAAAAGAAAATCTCGACCAAAAGCAATTAGAAGGGATCCAAACGTGTTT
GATCGATCAAGACAAGTCTGTTGGGTTGGCAGAATCGCCCATCGATGGAT
TGGAAATCTTCCATCTAGAAGAATTTGACGTTGATAAACAATCGGAAACT
TGTGGATCACAACAGCTTGACGACGTAGATTTAGTCACAACTAAACGTCC
AATGAAGGATGAACAATCGGAAACTTGTGGATCACAACAGCTTGACGACG
TAGATTTAGTCACAACTAAACGTCCAATGAAGGATGATCAATTCGACACG
GAATCTCTTATCGGGTTCATTTCCACAACAGATGTCGACTCGGACATAGA
GCCCCCAAAGAAACGTGCACGTAAAAACTGGTTCAACAGCCCACAACGAG
AGACCGACAAAGACGCTGTGGAAAGTGTTGTTGAATATCTCGTACGAAAC
GATCAATTCGACACGGAATCTCTTATCGGGTTCATTTCCACAACAGATGT
CGACTCGGACATAGAGCCCCCAAAGAAACGTGCACGTAAAAACTGGTTCA
ACAGCCCACAACGAGAGACCGACAAAGACGCTGTGGAAAGTGTTGTTGAA
TATCTCGTACGAAACGTTTCATCAAAAGACGTCAATGGATCATCGACGTT
GAAAACACAAACTAATACAATGCCTACACAGGATGTTTCATCAAAAGACG
TCAATGGATCATCGACGTTGAAAACACAAACTAATACAATGCCTACACAG
GATGCGGTCGAAAGTCCCATCAAAGACAAAACGTTCATCAAGTCACCAAG
ACGCTTCAAGGTGGAAGATATCAATAAACCCGAGTATTGGCGTATGGTTC
GTTCATACCTTCATCACAACTTGAAATTCAAGACGTTAAATGGACCTGTT
GCTCACTCCTTGTTTCGTCTCTTTGAAAAGTTTGAAGGTGCATTGAAAAG
TCCTCGACCACCAACGATGGCTGATCCAAAGCTAGATGCTTCATTCTTGG
TTCGGTCGAAAGTCCCATCAAAGACAAAACGTTCATCAAGTCACCAAGAC
GCTTCAAGGTGGAAGATATCAATAAACCCGAGTATTGGCGTATGGTTCGT
TCATACCTTCATCACAACTTGAAATTCAAGACGTTAAATGGACCTGTTGC
TCACTCCTTGTTTCGTCTCTTTGAAAAGTTTGAAGGTGCATTGAAAAGTC
CTCGACCACCAACGATGGCTGATCCAAAGCTAGATGCTTCATTCTTGGTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:401693..403760 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1255-1500:247 |
| Aaloc | 1186-1251:439 |
| Aaloc | 1021-1182:729 |
| Aaloc | 946-1017:988 |
| Aaloc | 1-942:2069 |
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