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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000475_pilon:108482..110441- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_025361 ID=XLOC_025361|Name=XLOC_025361|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1960bp|location=Sequence derived from alignment at sc0000475_pilon:108482..110441- (Clytia hemisphaerica_ch_hm2_pilon)
ACTGGTCCGTCACTCTTGGTTGGAAGGAGTTACAAATGTCCATTACACTC
AAAGTTGATAAGAACTACAGATGCTAAGATATTTGCCAGTACACAAAGAT
ATTCACAGGATGTTTTATTTTGTCACAAAATGGCATTCAAAAATGAATTT
CTGATGAGCTTGTTTCGAAGTATTTCATCTGGACTCTCTTTTGAGAAAGT
CAGAGAGACACTGACAGCAAGAACTCTGACCAATTTTCATATTGCTAAAA
ATAAATATCTCTATGATTGTGGTAAATTAAAGCTTTCTCCTGATTTAAAT
GCAATGGAAGAGATTAAGAAGCTACTCCTAAAAATGGTACCAAGCACAGA
TTCTCTAGAAGATCTCTTCAAATCTTGGTTTGAGCAAAATGAATCCTTCT
TTGTAGAAGACATGTCATCTTTGAAAGAATCGTTATTATCTGTTGATCAT
ACCTTCAAAGTAAGTATTATTCCAGAAAAAGCTTTTGCAGAAACTAGGTT
TTTGATTTTTGTCTAGTCATGTCAACAATTGTTTACGAATTAAGAATGAA
TAAAACAATAAGCAGAAAGGTAGTGACACCTTTTTTGACAATTGACAAAA
AGGTTTTTCTTATTTGATATTTTCCTGTGTAGATTTAGAAAAGGAAAAAA
GACGATCATGATATGATCAAATTAAAATTTTTAAAGCTTATTTCAAATTG
GTTTTAATTTTACCAACCAAAGATAGTAGGCATTTGTCACATGCTAGTAT
TTTTTGCTTGATCTTGTCATTTCTTTAATCTCTAAGGTGGCTACAAACAT
TGGGGGATTTCAAACACATGGAGAGGAAAGAGTTTGGGTACAGCTTTACA
ATTCACTCTTTATTGTTATGAATGAAAGAAAAGAAATAGTATCTTGGCAT
TTTACTAAAAAAGAAAAATTTCAGTTTGTCCAAGATCTTTTGTCAAATAT
TGGAGACAGGTGTAAAGATGACTTGCAGTATTTTATTTCTGATACGTGTT
GCAAGTGGAAACTCAAAATATTTGAATTGTTTGGAGAGCATATTCTGATC
AAGTTGGATCCATTCCATGCCATCCAACGCATTATCCTGACCATTCCAAA
AAAGCATCTTTTCCACCAGCAGCTATGCGATGATCTGAGAAAACTTTTCC
GGAAGCCTGGTGATTTTGGCGAATCAAGGAAAGAAGAAACAGCAGACCCT
CAAACGATCCTTTCCAGACTCGATGGGATCGTAAAGAAATGGGAAGCAAT
GGAGCAGCAGCAAGGCTCTGAACAAATCATTATCCGAAAGGAGACCCATG
ATGCCATCAGCAATTTGCGAAAGCACATCATTGCAGGATGCTGTTCAGGA
ATTCCACCAAATTGTTTATCAGGGACAAACGAGAATCTTCACAGGTAGAA
CTTATAATGATTCATTGCAGAGGTGTTGATAAGCCTCACTAAATGATAGT
ACTTGATATAATATATCATATATATCTTTTCTTTTTGGGAAAAAAGTCTT
AAGGGTCATTAAAATGGATCAAAGGATCAATTTTCAAACTTTGGTTTACC
ATACTTATCATACTGCAGAATTTATGGCAACCTCATTCCTCTGGATTTTC
TTGTGTGAAGCAGTCTATTGTAGATTTTTATTTTCAATTGATACTGAATT
TAATTTTTTTAGGTCTTTAAACAAGTTTCTGAAAGGCAGAGTGATGGGTC
CAGAATTGGCATATGCTTTATTCTCTGTGATTTTCTTCAAATGGAATCAA
AAAATCAAAGCAGCCAAGTATCGATACGAATTGGTGAACAGCGAAATATT
TGGTATGGGTGGATCCTCAATGCAAGCCATTGAATCCAATCTGGATAACT
TTCTTGGAAAATGGTGCACCAAGAAGCTAGCTGCAGTGAACCATCCAATT
TTGACACAGCTGACTACCCTTCAGAAGATCTCTTCCTTTATTGAGGTTAG
CAATATTGCA Coding sequence (CDS) from alignment at sc0000475_pilon:108482..110441- >XLOC_025361 ID=XLOC_025361|Name=XLOC_025361|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2730bp|location=Sequence derived from alignment at sc0000475_pilon:108482..110441- (Clytia hemisphaerica_ch_hm2_pilon)
ACTGGTCCGTCACTCTTGGTTGGAAGGAGTTACAAATGTCCATTACACTC
AAAGTTGATAAGAACTACAGATGCTAAGATATTTGCCAGTACACAAAGAT
ATTCACAGGATGTTTTATTTTGTCACAAAATGGCATTCAAAAATGAATTT
CTGATGAGCTTGTTTCGAAGTATTTCATCTGGACTCTCTTTTGAGAAAGT
CAGAGAGACACTGACAGCAAGAACTCTGACCAATTTTCATATTGCTAAAA
ATAAATATCTCTATGATTGTGGTAAATTAAAGCTTTCTCCTGATTTAAAT
GCAATGGAAGAGATTAAGAAGCTACTCCTAAAAATGGTACCAAGCACAGA
TTCTCTAGAAGATCTCTTCAAATCTTGGTTTGAGCAAAATGAATCCTTCT
TTGTAGAAGACATGTCATCTTTGAAAGAATCGTTATTATCTGTTGATCAT
ACCTTCAAAACTGGTCCGTCACTCTTGGTTGGAAGGAGTTACAAATGTCC
ATTACACTCAAAGTTGATAAGAACTACAGATGCTAAGATATTTGCCAGTA
CACAAAGATATTCACAGGATGTTTTATTTTGTCACAAAATGGCATTCAAA
AATGAATTTCTGATGAGCTTGTTTCGAAGTATTTCATCTGGACTCTCTTT
TGAGAAAGTCAGAGAGACACTGACAGCAAGAACTCTGACCAATTTTCATA
TTGCTAAAAATAAATATCTCTATGATTGTGGTAAATTAAAGCTTTCTCCT
GATTTAAATGCAATGGAAGAGATTAAGAAGCTACTCCTAAAAATGGTACC
AAGCACAGATTCTCTAGAAGATCTCTTCAAATCTTGGTTTGAGCAAAATG
AATCCTTCTTTGTAGAAGACATGTCATCTTTGAAAGAATCGTTATTATCT
GTTGATCATACCTTCAAAGTGGCTACAAACATTGGGGGATTTCAAACACA
TGGAGAGGAAAGAGTTTGGGTACAGCTTTACAATTCACTCTTTATTGTTA
TGAATGAAAGAAAAGAAATAGTATCTTGGCATTTTACTAAAAAAGAAAAA
TTTCAGTTTGTCCAAGATCTTTTGTCAAATATTGGAGACAGGTGTAAAGA
TGACTTGCAGTATTTTATTTCTGATACGTGTTGCAAGTGGAAACTCAAAA
TATTTGAATTGTTTGGAGAGCATATTCTGATCAAGTTGGATCCATTCCAT
GCCATCCAACGCATTATCCTGACCATTCCAAAAAAGCATCTTTTCCACCA
GCAGCTATGCGATGATCTGAGAAAACTTTTCCGGAAGCCTGGTGATTTTG
GCGAATCAAGGAAAGAAGAAACAGCAGACCCTCAAACGATCCTTTCCAGA
CTCGATGGGATCGTAAAGAAATGGGAAGCAATGGAGCAGCAGCAAGGCTC
TGAACAAATCATTATCCGAAAGGAGACCCATGATGCCATCAGCAATTTGC
GAAAGCACATCATTGCAGGATGCTGTTCAGGAATTCCACCAAATTGTTTA
TCAGGGACAAACGAGAATCTTCACAGGTGGCTACAAACATTGGGGGATTT
CAAACACATGGAGAGGAAAGAGTTTGGGTACAGCTTTACAATTCACTCTT
TATTGTTATGAATGAAAGAAAAGAAATAGTATCTTGGCATTTTACTAAAA
AAGAAAAATTTCAGTTTGTCCAAGATCTTTTGTCAAATATTGGAGACAGG
TGTAAAGATGACTTGCAGTATTTTATTTCTGATACGTGTTGCAAGTGGAA
ACTCAAAATATTTGAATTGTTTGGAGAGCATATTCTGATCAAGTTGGATC
CATTCCATGCCATCCAACGCATTATCCTGACCATTCCAAAAAAGCATCTT
TTCCACCAGCAGCTATGCGATGATCTGAGAAAACTTTTCCGGAAGCCTGG
TGATTTTGGCGAATCAAGGAAAGAAGAAACAGCAGACCCTCAAACGATCC
TTTCCAGACTCGATGGGATCGTAAAGAAATGGGAAGCAATGGAGCAGCAG
CAAGGCTCTGAACAAATCATTATCCGAAAGGAGACCCATGATGCCATCAG
CAATTTGCGAAAGCACATCATTGCAGGATGCTGTTCAGGAATTCCACCAA
ATTGTTTATCAGGGACAAACGAGAATCTTCACAGGTCTTTAAACAAGTTT
CTGAAAGGCAGAGTGATGGGTCCAGAATTGGCATATGCTTTATTCTCTGT
GATTTTCTTCAAATGGAATCAAAAAATCAAAGCAGCCAAGTATCGATACG
AATTGGTGAACAGCGAAATATTTGGTATGGGTGGATCCTCAATGCAAGCC
ATTGAATCCAATCTGGATAACTTTCTTGGAAAATGGTGCACCAAGAAGCT
AGCTGCAGTGAACCATCCAATTTTGACACAGCTGACTACCCTTCAGAAGA
TCTCTTCCTTTATTGAGGTTAGCAATATTGCAGTCTTTAAACAAGTTTCT
GAAAGGCAGAGTGATGGGTCCAGAATTGGCATATGCTTTATTCTCTGTGA
TTTTCTTCAAATGGAATCAAAAAATCAAAGCAGCCAAGTATCGATACGAA
TTGGTGAACAGCGAAATATTTGGTATGGGTGGATCCTCAATGCAAGCCAT
TGAATCCAATCTGGATAACTTTCTTGGAAAATGGTGCACCAAGAAGCTAG
CTGCAGTGAACCATCCAATTTTGACACAGCTGACTACCCTTCAGAAGATC
TCTTCCTTTATTGAGGTTAGCAATATTGCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000475_pilon | genome | sc0000475_pilon:108482..110441 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1069-1365:298 |
| Aaloc | 460-1065:1175 |
| Aaloc | 1-459:1961 |
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