XLOC_025333 (mRNA) -

Overview
NameXLOC_025333
Unique NameXLOC_025333
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000175_pilon:58032..58859+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_025333 ID=XLOC_025333|Name=XLOC_025333|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=828bp|location=Sequence derived from alignment at sc0000175_pilon:58032..58859+ (Clytia hemisphaerica_ch_hm2_pilon)
GACAATATGCCAAACGTATTATGGGTATGGGATTTGAGAAGCTTGAAATT GGTCAGTCTTTTGGTACAATGTCACGCCATTAAAGGTATTTAACTTTTGG TGTTTACATTAGTATTGGATAATTATTGTTGTAAGCAGGTGTAAGTGTCC TCGTACTCTTGTTAAAGTTTCTTGTTACACTAAGTGAAAGAGAAAATTAT CTTGAAGAGATGATTGATTTCTTTAATCTTgacaatgaaaatttgaaatt cctaGAGTTTTTTAAAAGGGTTTTTGAATCGAAATTCTTTAGGTTTCAGA TACTTCTAACAAACcagttgtattttcattgtttcagctTTCTCTTGGGA TCCAAAAGAAATCCGTTTGGCTTTATGTGCTGGTACCAACAAACTGTACA TGTGGTCATTAGCTGGTTGTTTGGCTGTTGAGGTGCCTGGTGAAGGTCAG TCTCCTTATATTAATTATCCTCCTTGCTTATAGAGATCCGGTTCCATTAC CAAGGTCATCTGCTAATATCATTATAATATATTGAAACATCCTTTGTAAC ATAATAGTCAACAATTACTGTTAAGATATGAAGTTACTCGGTTTAATTCG AGGTTACGTGggttttacgccggcccttattacgctaTCGACGAAAAAAT ACGAATTTCCTCAGGATTTTATCAGGAAATTAGGGCAATAGATGGAtcca tctttgtttttttaggtGATATAGCAGTGACCAGTTTGACTTGGCATGAA TCTGGTGATTCCATCTTATTGGCAAGTAAAGATCAAATGTGTATGTGTTT CTTGACAAACCCTGAAGACAGCATGTAA

Coding sequence (CDS) from alignment at sc0000175_pilon:58032..58859+

>XLOC_025333 ID=XLOC_025333|Name=XLOC_025333|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=612bp|location=Sequence derived from alignment at sc0000175_pilon:58032..58859+ (Clytia hemisphaerica_ch_hm2_pilon)
GACAATATGCCAAACGTATTATGGGTATGGGATTTGAGAAGCTTGAAATT
GGTCAGTCTTTTGGTACAATGTCACGCCATTAAAGGACAATATGCCAAAC
GTATTATGGGTATGGGATTTGAGAAGCTTGAAATTGGTCAGTCTTTTGGT
ACAATGTCACGCCATTAAAGctTTCTCTTGGGATCCAAAAGAAATCCGTT
TGGCTTTATGTGCTGGTACCAACAAACTGTACATGTGGTCATTAGCTGGT
TGTTTGGCTGTTGAGGTGCCTGGTGAAGctTTCTCTTGGGATCCAAAAGA
AATCCGTTTGGCTTTATGTGCTGGTACCAACAAACTGTACATGTGGTCAT
TAGCTGGTTGTTTGGCTGTTGAGGTGCCTGGTGAAGgtGATATAGCAGTG
ACCAGTTTGACTTGGCATGAATCTGGTGATTCCATCTTATTGGCAAGTAA
AGATCAAATGTGTATGTGTTTCTTGACAAACCCTGAAGACAGCATGTAAg
tGATATAGCAGTGACCAGTTTGACTTGGCATGAATCTGGTGATTCCATCT
TATTGGCAAGTAAAGATCAAATGTGTATGTGTTTCTTGACAAACCCTGAA
GACAGCATGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_025333XLOC_025333-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000175_pilongenomesc0000175_pilon:58032..58859 +
Properties
Property NameValue
Aaloc211-321:718
Aaloc103-207:340
Aaloc16-99:1