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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000360_pilon:6568..8487+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_025329 ID=XLOC_025329|Name=XLOC_025329|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1920bp|location=Sequence derived from alignment at sc0000360_pilon:6568..8487+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGCCTCTTTTGGACTGAACAGCAAAAGTATCTACGTACCGACAAGAA
TCATCAGTTGAGATACCACCCAGATATCATCAAATTTTGCCTATCAATCT
CAGCCAAATCATCTGCTGCATATGACCAACTAAGGTTGAATAGTAAAGAC
GGCTCAGGGATCTTGGTTCTCCCTTCCCAAAGAACACTTCGTAACTACCG
GAATCATATCAAACCTCAACAAGGATTTGATCCTAAAATTGTTGCTGACT
TAACTGAGAGaaccaaaaaattttcagaacgCGAAAAATTTGTATCTGTG
GTTATTGATGAGATGAAGGTTCAAGAAGATCTGGTTTGGGATCGCAGCAC
TGGAAAGCTTATTGGTTTTCTCGACCTTGGAGACACTGCTATCAACGAAA
GCACTATatccaatgaaacaaaactTGCAACCCATGTCATGGTGTTCCTT
GTGAAGAGTGTCATGAATCCACTCTCGTTTAGCTTTGCAACCTTTGCAAC
CGATACTGCTTCATCTGCccaaatctattctttgttttgGAAATGTGTAA
GCATACTGGAAATATCATGTCAGCTTAAAGTAATTGCAACAGTTGCTGAT
GGAGCTTCAACCAATCGTCGATTTGCTAAAATGAACAGGGTAAGTTGCAG
AGAAACAGCTTTAAAAAACTCATTTTGAAAACTAGTCCTCTATTTTAGTT
TACTTGGGTACTATTAGACATGTAgattattctgaaaaatcaCAAATTGA
AATTTACCACACATTTTATGCCCtagcaaaacttttttaaacccaaactt
ttattattttagGATCAAGATGATGTCAAGTGTAGTGAAGTCGTTTATCG
TACCATCAATGTATATGCACCCGAACGATACATTTACTTCTTTGCAGATG
CTCCTCACTTAATAAAGACATCACGCAATTGTTTGTGGAAATCAGGTCAA
GATGGGTCAGCAAGATTTATGTGGAACAATGGTAAGTACTGATAATACTA
ATGAGGATATTTTATGATAAGTTGACCTTTGTCGAGAAGATTCCAGCTTA
AGAAAGAAATTAGGTAAATTGTCATACATCTACTCTACAGCTCATTGTTA
CCCTACTTATATGTCTACACGGTTTTATTTAGAAGCACAAGCTAGATTTC
TGTGATGTTAAAGGGTTTTTGTCAGCTGCTTCTCTATCCATATAGTGAAT
actgtgttttgtttttaaggcTTCTACATGATTTGGCGTCACATCAAAGA
CCTTTACAAGGAAGACATCGAATTTGGCCTTCAACTCTTACCCCACTTGA
AATCTGACCATATCTACTTAAACTCGTATTCCTTGATGCGTGTCAAATTG
GCAACCCAAATCCTGAGTGAAACAACAAGCGCCGCCTTATCAGTATCTGG
ACCAAAGGAAGCGAAAGGAACTGCCAATTTTTGTTTGcagtttgataaat
ttttcgatTGCTTCAACGTccaattcaaaaggaaacaCATCACTTCACGT
AAACCTTTCCTGAAACCTTATACGGCAGATTCTGAAGATGAAAAGGAAAT
AGAGCGCTGGAAATTTCTCAATGATTTCCTTCAATACTTGAAGGATTGGA
GGAAAAGTATCGATGAAAGGCCTGGCGATTTCACACCAACACAACGAAAC
AATATGTTTCTGTCCCAGCCTACTTATGAGGGTATACAAATGTCCATCAA
TTCACTTAAAGAGATTGTACCTTATCTTCTAGGACAGGGATTTGAGTATG
TGCTCACCGAAAAATTTTGTCAGGACGATTTAGAGAACTACTTCGGCCGA
CAAAGGGCAATTGGTGCAAGAAATGATGCTCCTAATGTTAAACAGGTCTT
GTCTAATGATTCTTATATAAAGAATGGTTTCGAGAATGGACCTATCCGTG
GTAGCAAttgtgaaaaatga Coding sequence (CDS) from alignment at sc0000360_pilon:6568..8487+ >XLOC_025329 ID=XLOC_025329|Name=XLOC_025329|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3018bp|location=Sequence derived from alignment at sc0000360_pilon:6568..8487+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGCCTCTTTTGGACTGAACAGCAAAAGTATCTACGTACCGACAAGAA
TCATCAGTTGAGATACCACCCAGATATCATCAAATTTTGCCTATCAATCT
CAGCCAAATCATCTGCTGCATATGACCAACTAAGGTTGAATAGTAAAGAC
GGCTCAGGGATCTTGGTTCTCCCTTCCCAAAGAACACTTCGTAACTACCG
GAATCATATCAAACCTCAACAAGGATTTGATCCTAAAATTGTTGCTGACT
TAACTGAGAGaaccaaaaaattttcagaacgCGAAAAATTTGTATCTGTG
GTTATTGATGAGATGAAGGTTCAAGAAGATCTGGTTTGGGATCGCAGCAC
TGGAAAGCTTATTGGTTTTCTCGACCTTGGAGACACTGCTATCAACGAAA
GCACTATatccaatgaaacaaaactTGCAACCCATGTCATGGTGTTCCTT
GTGAAGAGTGTCATGAATCCACTCTCGTTTAGCTTTGCAACCTTTGCAAC
CGATACTGCTTCATCTGCccaaatctattctttgttttgGAAATGTGTAA
GCATACTGGAAATATCATGTCAGCTTAAAGTAATTGCAACAGTTGCTGAT
GGAGCTTCAACCAATCGTCGATTTGCTAAAATGAACAGGATGCGCCTCTT
TTGGACTGAACAGCAAAAGTATCTACGTACCGACAAGAATCATCAGTTGA
GATACCACCCAGATATCATCAAATTTTGCCTATCAATCTCAGCCAAATCA
TCTGCTGCATATGACCAACTAAGGTTGAATAGTAAAGACGGCTCAGGGAT
CTTGGTTCTCCCTTCCCAAAGAACACTTCGTAACTACCGGAATCATATCA
AACCTCAACAAGGATTTGATCCTAAAATTGTTGCTGACTTAACTGAGAGa
accaaaaaattttcagaacgCGAAAAATTTGTATCTGTGGTTATTGATGA
GATGAAGGTTCAAGAAGATCTGGTTTGGGATCGCAGCACTGGAAAGCTTA
TTGGTTTTCTCGACCTTGGAGACACTGCTATCAACGAAAGCACTATatcc
aatgaaacaaaactTGCAACCCATGTCATGGTGTTCCTTGTGAAGAGTGT
CATGAATCCACTCTCGTTTAGCTTTGCAACCTTTGCAACCGATACTGCTT
CATCTGCccaaatctattctttgttttgGAAATGTGTAAGCATACTGGAA
ATATCATGTCAGCTTAAAGTAATTGCAACAGTTGCTGATGGAGCTTCAAC
CAATCGTCGATTTGCTAAAATGAACAGGGATCAAGATGATGTCAAGTGTA
GTGAAGTCGTTTATCGTACCATCAATGTATATGCACCCGAACGATACATT
TACTTCTTTGCAGATGCTCCTCACTTAATAAAGACATCACGCAATTGTTT
GTGGAAATCAGGTCAAGATGGGTCAGCAAGATTTATGTGGAACAATGGAT
CAAGATGATGTCAAGTGTAGTGAAGTCGTTTATCGTACCATCAATGTATA
TGCACCCGAACGATACATTTACTTCTTTGCAGATGCTCCTCACTTAATAA
AGACATCACGCAATTGTTTGTGGAAATCAGGTCAAGATGGGTCAGCAAGA
TTTATGTGGAACAATGgcTTCTACATGATTTGGCGTCACATCAAAGACCT
TTACAAGGAAGACATCGAATTTGGCCTTCAACTCTTACCCCACTTGAAAT
CTGACCATATCTACTTAAACTCGTATTCCTTGATGCGTGTCAAATTGGCA
ACCCAAATCCTGAGTGAAACAACAAGCGCCGCCTTATCAGTATCTGGACC
AAAGGAAGCGAAAGGAACTGCCAATTTTTGTTTGcagtttgataaatttt
tcgatTGCTTCAACGTccaattcaaaaggaaacaCATCACTTCACGTAAA
CCTTTCCTGAAACCTTATACGGCAGATTCTGAAGATGAAAAGGAAATAGA
GCGCTGGAAATTTCTCAATGATTTCCTTCAATACTTGAAGGATTGGAGGA
AAAGTATCGATGAAAGGCCTGGCGATTTCACACCAACACAACGAAACAAT
ATGTTTCTGTCCCAGCCTACTTATGAGGGTATACAAATGTCCATCAATTC
ACTTAAAGAGATTGTACCTTATCTTCTAGGACAGGGATTTGAGTATGTGC
TCACCGAAAAATTTTGTCAGGACGATTTAGAGAACTACTTCGGCCGACAA
AGGGCAATTGGTGCAAGAAATGATGCTCCTAATGTTAAACAGGTCTTGTC
TAATGATTCTTATATAAAGAATGGTTTCGAGAATGGACCTATCCGTGGTA
GCAAttgtgaaaaatgagcTTCTACATGATTTGGCGTCACATCAAAGACC
TTTACAAGGAAGACATCGAATTTGGCCTTCAACTCTTACCCCACTTGAAA
TCTGACCATATCTACTTAAACTCGTATTCCTTGATGCGTGTCAAATTGGC
AACCCAAATCCTGAGTGAAACAACAAGCGCCGCCTTATCAGTATCTGGAC
CAAAGGAAGCGAAAGGAACTGCCAATTTTTGTTTGcagtttgataaattt
ttcgatTGCTTCAACGTccaattcaaaaggaaacaCATCACTTCACGTAA
ACCTTTCCTGAAACCTTATACGGCAGATTCTGAAGATGAAAAGGAAATAG
AGCGCTGGAAATTTCTCAATGATTTCCTTCAATACTTGAAGGATTGGAGG
AAAAGTATCGATGAAAGGCCTGGCGATTTCACACCAACACAACGAAACAA
TATGTTTCTGTCCCAGCCTACTTATGAGGGTATACAAATGTCCATCAATT
CACTTAAAGAGATTGTACCTTATCTTCTAGGACAGGGATTTGAGTATGTG
CTCACCGAAAAATTTTGTCAGGACGATTTAGAGAACTACTTCGGCCGACA
AAGGGCAATTGGTGCAAGAAATGATGCTCCTAATGTTAAACAGGTCTTGT
CTAATGATTCTTATATAAAGAATGGTTTCGAGAATGGACCTATCCGTGGT
AGCAAttgtgaaaaatga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000360_pilon | genome | sc0000360_pilon:6568..8487 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 811-1509:1222 |
| Aaloc | 640-807:813 |
| Aaloc | 1-639:1 |
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