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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000297_pilon:235351..243538- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_025252 ID=XLOC_025252|Name=XLOC_025252|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8188bp|location=Sequence derived from alignment at sc0000297_pilon:235351..243538- (Clytia hemisphaerica_ch_hm2_pilon)
TCAGGATCAATCACTTCTCTATCCGTGCAGTCCAACGTTGCACACCAAGT
TCGAATTCTACTGAGCTGGAATCACAAGATTCTTTTACGGGAAGTATAAA
GTATTCTAAATTTGATAATGTGTCAATGTTTAATATATTGGAGTACATTA
GGACAATAAATTGTAAGTTTTCTTTTCCGATTTCAAATCTGCTGATTATG
CTAATAAAACCTTCTCTAAATTTCTCTAAATTTTAGTTTCCTCTCGAGAG
AGAAATCCGAACGACAACGGATTAAGTATCTCCGAACCAGCAAAGACCGT
TACTGGTAAGTTTATTCATACTTGTTAGCCCCTATGCTCCTCGTGCTAGC
TTACACAGTTTTTCACAAACAAAATATTATGTAATCCTCAAATGCTATTC
AATATGTCACGGTACACTTTCCCATTTTCTTTTTTAACTTAAACAATCGA
AAATTATTTTCATTTGTTGACCCTTTTAATTTCAGATTCCCTTTTTGAAC
CAACTCAAAACCTATGTCCGTCTGTCCCTGTCCAGTCAAATTCAACTAGG
AGTGGCTCAACTACCGGCCAACCATCGACCTCAAATACTGGTGAGTATAT
TCATAATTGTTTTTATTTTTATTTTTTAATATCCCTTTAACTGCCGATGT
CGGCATATGCCGCAAAATTTAACACTTCTACAAAGATTTTGTATTAGATG
GTTTGAAATGAAAAAAGATAATAGTTAAAAGCTTTTCTATGTTCAAAATA
ACAACAAATATTCAACAATGTTCAACTCAAAATTATAGTCCTTGGCTGAT
ACTTCATATATTATTCAGAAAATTAAGTCAAAATCGCTACCTTTTGCCCA
TGTCGGCATATGCTGACATCTGGCAAATAGGTCGAATCTTCTTTTTTTCC
CGTGGCTATCTGTCGAACCTTAAAAAATACGCACGGCAGTTAAGAGCCAT
TTTTTTAAAAACCTTCAGATTCTTCAAGGTGTGATTTCTTGATGTCTCAG
ATTTTGTTGAAATTTTCACCAAATGATCCTATAGATGAGGAAAGAAAATC
CTGAAAATTTCAGCTTCATATCTTGAGCGGTTCTGGAAATATGGCGGTTT
CAGTTTTCAAATCAGAGGCTTTGGATGCTTGCGTAAATGGAGAAATTCTG
TTTGGAGCGATTTCAAATGCCAATAAATTCTGATCCATTTTGAGTAAGGA
GCTGATTTTTTCAGCATTTGCACAACTTTTAGTGTATTTTCAGAAAAACT
AAATATCAAGTCCTTATTTTTTTCAGAAAAATTTTTAGGACCCCCAGCAG
CGTGCTCCGAAAACTGAAAATCCAAGTTTCGGCCACTAAAAGCACCTTGA
TTGTGCACCAGTGGTGGGTGTTAAGTCCTCAAAACCTGATGGAAATGCAA
TTATGGGTGAAATTCTTTACATAAAACCACTTTTCAGGTTACCTACCGCC
ATATTGGAATTCATAATGGCGGCCAAAGTTGCGACCACAGCAAAAAAACC
GAAAATCCCTCCAAATCCGGAAGGCCATAACTTTTAACGCCAACACCAGA
TTTTTTTGAAATTTTAAGGAAAGTCTCTCCATTGGGTCTACTTTACTTCC
TGAAAAAATCTTTATGGGCAAATGTATAGATCAGCCACAATTTACATATG
AAAATAGCCTTTCGTTTCTATGGCGGACTGCTAAATTCCTAGGGCCTGGA
CCGTACAAACTCATGAAAATTTGAAAGTTTTCATTTGTGAATGTCACATA
ATAACATATTTGAATTGAAAAGTTAAAAAAGTTAGAAAAACTAACAAAAT
AATAGTTAAAAACTGATAACAAAATGTCTTAGAAACAGAATAGCCGGTGC
TTCTTAAATTAAAAAAAAATCGATAGAGCGGCAATTAAGATGCTGCGTGA
ACTTGTGAATTATTTTCAGAGAACTAGTAATATAGGCCCAACTTAAATTC
ATTTCAGGGCCATTGATGTAGTTAGTTTTTTAAAACCATCAGTACCAGAA
TTGTGAAATACAGTTCTCCATGCATTCTTTTGTTAGGTTTTTGCTGCTAC
AAAATTTAATTAGATTTTATAAGTATTTTTATCCGAAATTTATTTTCAGA
GATAATTTATGACGAAAATAATATTGTAAATATCCATTCAATTTGTCCCT
TCAATTAGAAAGTTTTTGTAATGTTCTTTCTTTATTCATTCTTTCTATTT
TTCTTTTTTTCTTCTTTTTTTTCTTCTTTTTTTCTTCTTTTTTTTCTTCT
TTTTCTTTTGTTTCATTCATTCATTCATTCTTTTTCTGACTATAAGACTA
TAAAAGAATGACAACATTTTTTTTTTCATTTTCATTTTTACACTGACAGA
GCAGGTACACCATGGCTATGCTGCAAGGTGCAAAGTATGTTGGCTGTTTT
AGAGCATCACAAGGTAATTGTGGTATTTCTCCGAGGAACAATATATCTGG
AACTTTCGAAATTACTGATATTGATCAACCTGTTCACGTTGGTTCAAATG
TAGTCAATGAAAAAGAGCTCATAGAATCTAGAGCTAAAGTGACAATGGAA
GAAAATGCCAAAATTTGTGCATATCATCGATACCAGTTGGGAACCTTATG
GAGATCACCTAATTATTGTTTCATCCATTGCATAAGAAACCTGATGTCAA
AGGCTTCAGAAAAATGAAAAAGGTTTCAGGGCTCAGACCAGCATCAATAA
GTATGTACGAGTCAATTAATGAAGAGTTTCCCTTGGAGTTTCCTATGTTT
GGAAACTTATGCCGTATCCATCGATCAATGCCAGCTGTTGTTGATACTGA
TTCTACCGATCTTGATTTTACACCACCTCCAGACACTCAAGAGTCCGTTC
ATTCTTCGAGGAATCGCCATTTGATAAGTCTCCCACCAAATACAAACTGA
CAAATTCTGTGAATAATTTATCTGAATCGACTGTAAGATATCATAAACGA
AAGTACAAGGATTATGTCGAATCATGCAAGAAAAAGTACAAGAAAATGGT
TGCTCCAGGTCAGGTGGACAGTTTTCAGCCTTATTTTCTTCATCTGGCTC
AGAGACTGAAGAAGGTTGTATACCTGAAGACCTGAAATTCTTACATAGGG
CATACCAAGAAGCTGAATCCGAAAAACAGAAAACTCATATACTGTCAGCT
ATTCCCAAAGAGCAATATTCTATACAAAATATTATGAACTTGTTTTCATG
CACCAAATATCGAATTCAACAAGCAAGGAAATGGGCAGGAACAAATGGGG
CACTAAACTTCCAGTCAGAAAAACCCTTTACCAAGAACAAATTGAACATT
GACTCTGCTGAACATTTCGTAAATTTCTTGTTTCAAAGTAATCTCCTGCA
AGATGTTGCCTATGGAACAAGTACTTTAGAGTTTGCTGATGGTTCAAAAC
AACTTCTTCCAAAGTCTGTTCTTACGTTGTCCAAGACTCATACAATCTCT
GCATATAAAGAACATTACCGTCTTATAAACTTTACACCTCTATCTGACAG
TACTCTTTGGCAGATTTTGAAAGCTATAAAGCCTGGTCAACGCCGTGCAA
TGGCAGGGCTTGATAACAACACGTCAGATGGCTTAAAAGGTTTTCAAACA
TCGACTGACCAACTAGACAAGCAAGAACTTGATTCAAAACAAAAGTCTAC
CCTCAGAAAAGATCTCAACGATTCTAAACGGTATCTCAAGATGAAGTACC
CTTTACATTGTACAGAGGAAAGTGAAATTAGTACTCATTGCATGTCATTT
GCTCTTTACTGTCCCAAGGATGACAACTTTCAACCTGAACACTACCATGG
TGATCATGATAAGGTGTGCCCAGATTGTTTCAAGCTTATCAAAACTCTAG
AAACTTTGAAACTGTCAGCTCAGAACATAGATTCTCGTGAGATTAGAGAT
GAAGTGTTGTACGACATGAAAATAGCATCTAACCAAGTAATTGGTCGGAT
GAAACACATCCTCAGAGGTGTGAAGCAAGAAGAAGCAAAGCATTTCGCCA
TGGAAAATTTATCAAACGAAACAGGGTTTTGGCTAAGCGATTGGGCACAA
AAAATCTTGCCTTCAAGCTTCCGTGAAGGACAAAGAGAATACTTTGGGAA
AAAAGGGATGTCAATGCATGTTGATGTCGTCCTTAAAAGAACACCAGAGA
ATGATGTTGTAAAACACACATACCTGACAACCCTAACTCGCTGTGATCAA
GATGTAGTTGAAACATTATGTGTTGCTGAGCTTGTTGTCAAGCAAATAAG
AGAAGACTTTCCAGAGCTCAAAAACCTCTACAGAAAATCTGATAATGCCA
GCTGTTATGCCGGAAACTCAGTGGCAGAAGTAGAATATCTAATTTGTAAA
AGGAATGACATCAACCTTTTGCGCCATGACTATAATGAGCCCCAAAAGGG
CAAAGATCAAGCGGATCGTGACAGTGCAGTAGCAAAACGATATCTAAACG
CCTACATCCATTCAGGCAACGACTGTCTTTCTGCCAATGATATCAAGAAA
GGAGTTCTCCATCAAGGTGGTCCTAAAAATACCAAAGTGTGTGTTGCTGA
GATTGACAAATCAAAATGTCACTTAACCCAAAGTAAAATCAAAGACATTC
AATCCTTTCATTCGGTACTTTTTCATAGACTTGGAATGGTATTTTGGCAA
TACTTTGACTGTGGAGCTGGTCGGTTTGAATCATACTCTGATTTAGAGTT
CACATCTGGCCTGTATCTCACAAGTGATTTTTCCCAAAATCATGAACGTC
CATCTATCCTATCAACGAAAAAACGGATTGATAGAACGCTGTGTTGTTTG
TTCTTCTGCCCCCAAATTGGCTGTATCGATACGTTTCAAACCAACGATGA
ATTGAATGAACACATTGATCGTGGAATACATAATCATCATGCAACAACAT
CCAACATCGATTCCGTTAAGATTCATTATGCCAAACTTCTTCATGAAGCT
TCCCACACCATCACATCAAAAAACCAACCATCAGTCTCCATCCCCCTCTC
AGATTTGATTGAAGATTGCGAGTTGTACAGGGATTTCAATAAGTTTGGAT
GGGCTCTTACAGAAAGAGTAGTTACCCGTTTCAACCAGAAGCAACGTCAA
TTCATTTACGATGAGTTTATGAAAGGAGAGTCAGGATCCGGAAAGAAAAC
AACAGCAGAAGCTGCTGTGTTGAAATGCGTTCTTGTAGAGATGAGAACAA
CTGTAAAATGTTTACCCCTGATGAGTACCTCACTAAGGAGCAGATGGCTC
GTCAATTTTACCGCCTTACTCGTGAGAAAAAGAAAGGAAAAGTTATCGAG
CCAACACAGATTGAAGTTGTGGATGAAACTGACGTACCAGAAGAAGAAAT
CGATGTATTACAAGATACAATGGAGGCTATTAAATCACATTTTGAAATCA
AGATAAGTGATTTTGTTTGTATTGCGATAACCAATGAAAATCCCAAGGCT
CCAACAAGAAAGGAGCATTTTATTGGTCAAGTTATTGATGTTGATGATGA
TATGATTGAAGTGAGCTACCTTGTCTTTAAAGCAGGTGGTTACTATTTTT
GGCCACAAAAGGCTGATCAATCGTGGGTTTCAAAAAGTGAAATCCATTTG
AAACTAGATATGCCAGATATTGATCGTCGAGATCATTTGATTTTCTCTGA
GACTGACAATAATGACATCAAGAACTGTTGTGTGTAAAGATTACTTTTAG
TAAACTTGATTTTTTATTAGAGTTTATCTCACATCTTACCATTTACTTGC
TACATCAATAATTTGAAAACTCACTTACTTTTGTGTTCTATAGAAGCAGT
TGAGAAAAAAAATTGAATAATGGTCTCAGTCTTATGTTTCAACCTTCAAA
ATATTTTAAGTGAATAGCTGACTTTGATTTGGCATCTGTTCCTTTAGTCT
TTTAGGGATTCTAAAACATTTTGTTATAATTTTAGAAATATTATAAAAAA
GTTTATAAAAATTATAAAAAATATTTATTTAGTATTGTTACTGAGTTTGA
ACACCGATGAAAAGTTTTGAAACAAGTGATATTTGATTTCTGAAGACGTT
TTATGCTTTGAATAATACTGGATAGGTTTGAAAAAAATTATCATTTCAAG
ATCTATTATGATAGATTATTTTGTTGCTCGTGATTTCCATGTGTAACATA
AATTTTGATTAGTTCTCTGAAAGTAATTCGCAAGTTTTCACAAGTTTTCG
CAGCATCTTGAATGCCTAGCTATGGAATTTTAGGATCTAAGGAGCACCGG
CTATTCTGTTTCTAAGTCATTTTTAAAGACATTTTGTTATCATTTTAACT
ATTATTTTGATAGTTTTCTAACTAGTTTTTCATGAGTTTGTACGGTCCAG
GCCCTAGGAATTTAGCAGTCCACCATAGAAACGAAAGGCCATTTTCATAT
GTAAATTGTGGCTGATCTATACATTTGCCCATAAAGATTTTTTCAGGAAG
TAAAGTAGACCCAATGGAGAGACTTTCCTGAAAATTTCAAAAAAATCTGG
TGTTGGCGTTAAAAGTTATGGCCTTCCGGATTTGGAGGGATTTTCGGTTT
TTTTGCTGTGGTCGCAACTTTGGCCGCCATTATGAATTCCAATATGGCGG
TAGGTAACCTGAAAAGTGGTTTTATGTAAAGAATTTCACCCATAGTTTCA
TTTCCATCAGGTTTTGAGGACTTAACACCCACCACTGGTGCACAATCAAG
GTGCTTTTAGTGGCCGAAACTTGCATTTTCAGTTTTCGGAGCACTCTGCT
GGGGGTCCTAAAAATTTTTCTGAAAAAAAGAAGGACTTGAATTTTGGTTT
TTCTGAAACTACACCAAAAGTTGTGCAAATGCTGAAAAAATCAGCTCCTT
ACTCAAAATGGATCAGAATTTATTGGCATTTGAAATCGCTCCAAACAGAA
TTTCCCCATTTACGCAAGCATCCAAAGCCTCAAATTTGAAAAGTGAAACC
GCCATATTTCCAGAACCGCTCAAGATATGAAGCTGAAATTTTTAGGATTT
TCTTTCCTCATCTATAGGATCATTTGGTGAAAATTTCAACAAAATCTGAG
ACATCAAGAAATCACATCTTGAAGGCTCTTAGAAAAAATGGCTCTTAAAG
GGATATTGAATCTCGCTGGTAAATGTTGCAATTACATTCACATTCACATT
TTTCAAAGAGTTTCATGACCACATGACGTAACGAAAATTCCCAAGAAGTT
CTGTTAACATATCTCTCATCTACAAAAGCAACCAGTAAAACTGGTAAAAT
AAAGAAAATTATTTTATTCCTAACCACTCCGTTTATATTTATTAGATTCG
CAAATAAAATCTTTGCCGACAACACAAAAACAATACATAGTTGGAGGTAC
TTACGGTAAGAAATGTTCTTCTGAGGCTAGTTCAGAGGGAGGGCATATAG
AAGGAAGGTACAAAGGATCACCATGTATCATAAATTAATCTGTGTTTTAA
AAAAATTGTTGTCTAGTATAATTGTACTGCACATGGAGTGTTAGGAAATT
CAGATTTGGTGTTTATTATATATGCACTACAAAGCCGAAATTAAACCAAA
AATTTGTAAATTTGCTTTAATTTTAATAATTTATTTACCAATGTTCATGT
ACAATGTAAATATAAAAAAGGTGGCTGCATAAAATCGAAATACATGCCTC
CTAGTTCTGGTGTGAGATTCTAAGACGTCCAGGAGCAGTCAGTGAACTAA
TTTCAGGAAAACTTTTAACTTGGGAACATTTTTCTTGTGCGATGTAATAC
ACCGTTTAACAGTCTCGCCATCTCCACCGTAGAGGCGGTAGGTAAAAATG
CTCACATTAGTACTGTGGAAGGTTAGAGAAATGTAAACATTGCCATTGTT
TTCTTTCCTTTAAAGAGAATGTTTTAGATATTTGAACATGATATTAATGA
CAATTTTGTGTATCTCTCCTGAAAATTTCACAAAAATTCATCTAGAGGAA
AAGAAGTTATGATTAAAAGGAGTTCTTTACCAACCATTTCTCTGCTGGCT
TTTCTTATGAGAACTGGATGTTTACCTATCATTTTTTACGGGGGAGAGCG
AAGTTTCCCGTGGTTGCCAAAATCAAAACAATAGAAAATTTTTCATACGC
GTGCGCAATCGACACTGTTAAACGGTGTATTGTTTTTTAACCTATATTCT
TTATAGCACTCACAAAGGACAATATGAAAGAAGGGATG Coding sequence (CDS) from alignment at sc0000297_pilon:235351..243538- >XLOC_025252 ID=XLOC_025252|Name=XLOC_025252|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=718bp|location=Sequence derived from alignment at sc0000297_pilon:235351..243538- (Clytia hemisphaerica_ch_hm2_pilon)
TCAGGATCAATCACTTCTCTATCCGTGCAGTCCAACGTTGCACACCAAGT
TCGAATTCTACTGAGCTGGAATCACAAGATTCTTTTACGGGAATCAGGAT
CAATCACTTCTCTATCCGTGCAGTCCAACGTTGCACACCAAGTTCGAATT
CTACTGAGCTGGAATCACAAGATTCTTTTACGGGAATTTCCTCTCGAGAG
AGAAATCCGAACGACAACGGATTAAGTATCTCCGAACCAGCAAAGACCGT
TACTGTTTCCTCTCGAGAGAGAAATCCGAACGACAACGGATTAAGTATCT
CCGAACCAGCAAAGACCGTTACTGATTCCCTTTTTGAACCAACTCAAAAC
CTATGTCCGTCTGTCCCTGTCCAGTCAAATTCAACTAGGAGTGGCTCAAC
TACCGGCCAACCATCGACCTCAAATACTGATTCCCTTTTTGAACCAACTC
AAAACCTATGTCCGTCTGTCCCTGTCCAGTCAAATTCAACTAGGAGTGGC
TCAACTACCGGCCAACCATCGACCTCAAATACTGATTCGCAAATAAAATC
TTTGCCGACAACACAAAAACAATACATAGTTGGAGGTACTTACGATTCGC
AAATAAAATCTTTGCCGACAACACAAAAACAATACATAGTTGGAGGTACT
TACGCACTCACAAAGGACAATATGAAAGAAGGGATGCACTCACAAAGGAC
AATATGAAAGAAGGGATG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000297_pilon | genome | sc0000297_pilon:235351..243538 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 331-360:31 |
| Aaloc | 271-327:892 |
| Aaloc | 166-267:7702 |
| Aaloc | 97-162:7951 |
| Aaloc | 46-93:8145 |
| Aaloc | 1-42:8189 |
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