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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000067_pilon:1003503..1005290+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_025111 ID=XLOC_025111|Name=XLOC_025111|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1788bp|location=Sequence derived from alignment at sc0000067_pilon:1003503..1005290+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGACAATGGACCTTTGTTGGAAACATCGAAGGTTATCAAAAAGTA
TCAAGAGATAAAAAAGTTGTCCCCAAAATCGAAGATGAAGTCTAAAGAAA
TGTTTGAGATTTTAGCAAAGCATCTACCGGTATGTGTGATATACCTCAGT
AGAAAAGCATTTCTCTACGAGAACCTCTATCAAGAGGTGATTGACtctgt
tatgaaattttcgACAAATTCTATTGATCAAGAAGATTTGAATGACcaca
ttgaaagtaaaattggtGAAATCTATAAAGACGTTATCGAGTACATGGAC
ACTAAAAGAGATAGAGATGCTTTTAAAGCTGTCATTTCGCAAATAACGAG
TATAAGATTCGCAGCTAAACTCCAAGGAGTCCAGAGTAGAGTTGGCATCC
GGAATTCTTCACAATCCTTGAAAGGAAATCTGATCAAGTATAAAGACATT
AAATTGAGTTCCAAAACAGTCAGAAATGACATGACGGTTAACCAGCAACA
TAAATTCAACGGACGAATTGCAACAGcaagaaaatttaaagaaattaagg
taattaaattttgatattttctttattttttgttattttgtctaAGTAAA
ATCTGTAGAATGATTGAAGAAGGGGAGAATGGTAGAGAAAATGTGATTGA
CAAAAGTTTCCGGAGGGATATGTTTTAGATTTGTCTCAGATTTGTCTCAA
TATTTTTAGCCTAACACATGAGGTTTTTGGTAATCCTTGCCCCCTGATTA
GTATCCTTGACTAATATAATATCGAACATTAAAGCGCGGAAAACTCACGC
ATTCCTCCGTATTGAATTTTGAGTAATCTGTTACTTTTCTAAGTTTACGA
TTTTATCAATACTTTCAAAAGCGTCTTTGCGCTCTGGCGCTCTCAAGATT
AAGTAACATTATTTTCgacttctttttgacttttcacaTCTCTGTAAACA
ATTTATTTGTGGTGATTAATAGCACCGCAATGTCATTCATCTTTTTAACC
TAGcccttttgaaaatattgttttgtCCGCTGCTATCTTCGGTCAAGCTA
ATGTTGACAAGTCGTCTGTGCGACGGCCTTGGCCGCTAGTAAACAAAAGG
CGAAGAGAAGTATACAATTACTTCGAAGGCCCATCACTTGATTTTTCGat
caaactttatttttcaattttagacgATCGCCGCCGGAAGAGGAGCTCCA
CTCAAATGCGTACAGTTTCCCGAATTGACAGTCCTTCTGGAGAACATATT
TGCCGAGAGCGGTCTTGAAAGCCATCCCAGGTTGACAGACGATATTTTGT
ACCGTGCAACGAGCAATGCATTGACGATGACAAAAGCCCGCGAAATTCTT
TTATCACTTGCGccggaaaattttaaaatttgtttatcGACTTGTTTCAA
CTACACACAAAATTTTAAGGCCGGGACAGCTCAGGCTAAACGTCATCACG
AGGGTAGAGATATTAATGCTTGCATCTCTCTTCATCCACCTCCAAGAATT
GGTACAGAAAAACCTTCGCCTAATTTACATTGGTCTTCCTGTAATGTCAG
CCTCATGTTGTCAAATCGTGTAGATGACACCATTTTTGATTCAAAGGATG
CCAAGTCTATCGTTTGTGCCGACATTTCTCCGGTTCAAAGACCGTCAAAA
ACATGGAAAAAGAAGGAAGGGATATTACTAGACCATGAATGGAACCAGAG
CAGAATCAATGCAGTAACACCTATGGCTCATTTGTTTCTTGACGACTCCA
AAAACGAGGATTCTCACTCTATTCTTAGATCAGGTTAG Coding sequence (CDS) from alignment at sc0000067_pilon:1003503..1005290+ >XLOC_025111 ID=XLOC_025111|Name=XLOC_025111|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2328bp|location=Sequence derived from alignment at sc0000067_pilon:1003503..1005290+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGACAATGGACCTTTGTTGGAAACATCGAAGGTTATCAAAAAGTA
TCAAGAGATAAAAAAGTTGTCCCCAAAATCGAAGATGAAGTCTAAAGAAA
TGTTTGAGATTTTAGCAAAGCATCTACCGGTATGTGTGATATACCTCAGT
AGAAAAGCATTTCTCTACGAGAACCTCTATCAAGAGGTGATTGACtctgt
tatgaaattttcgACAAATTCTATTGATCAAGAAGATTTGAATGACcaca
ttgaaagtaaaattggtGAAATCTATAAAGACGTTATCGAGTACATGGAC
ACTAAAAGAGATAGAGATGCTTTTAAAGCTGTCATTTCGCAAATAACGAG
TATAAGATTCGCAGCTAAACTCCAAGGAGTCCAGAGTAGAGTTGGCATCC
GGAATTCTTCACAATCCTTGAAAGGAAATCTGATCAAGTATAAAGACATT
AAATTGAGTTCCAAAACAGTCAGAAATGACATGACGGTTAACCAGCAACA
TAAATTCAACGGACGAATTGCAACAGcaagaaaatttaaagaaattaagA
TGAAAGACAATGGACCTTTGTTGGAAACATCGAAGGTTATCAAAAAGTAT
CAAGAGATAAAAAAGTTGTCCCCAAAATCGAAGATGAAGTCTAAAGAAAT
GTTTGAGATTTTAGCAAAGCATCTACCGGTATGTGTGATATACCTCAGTA
GAAAAGCATTTCTCTACGAGAACCTCTATCAAGAGGTGATTGACtctgtt
atgaaattttcgACAAATTCTATTGATCAAGAAGATTTGAATGACcacat
tgaaagtaaaattggtGAAATCTATAAAGACGTTATCGAGTACATGGACA
CTAAAAGAGATAGAGATGCTTTTAAAGCTGTCATTTCGCAAATAACGAGT
ATAAGATTCGCAGCTAAACTCCAAGGAGTCCAGAGTAGAGTTGGCATCCG
GAATTCTTCACAATCCTTGAAAGGAAATCTGATCAAGTATAAAGACATTA
AATTGAGTTCCAAAACAGTCAGAAATGACATGACGGTTAACCAGCAACAT
AAATTCAACGGACGAATTGCAACAGcaagaaaatttaaagaaattaagac
gATCGCCGCCGGAAGAGGAGCTCCACTCAAATGCGTACAGTTTCCCGAAT
TGACAGTCCTTCTGGAGAACATATTTGCCGAGAGCGGTCTTGAAAGCCAT
CCCAGGTTGACAGACGATATTTTGTACCGTGCAACGAGCAATGCATTGAC
GATGACAAAAGCCCGCGAAATTCTTTTATCACTTGCGccggaaaatttta
aaatttgtttatcGACTTGTTTCAACTACACACAAAATTTTAAGGCCGGG
ACAGCTCAGGCTAAACGTCATCACGAGGGTAGAGATATTAATGCTTGCAT
CTCTCTTCATCCACCTCCAAGAATTGGTACAGAAAAACCTTCGCCTAATT
TACATTGGTCTTCCTGTAATGTCAGCCTCATGTTGTCAAATCGTGTAGAT
GACACCATTTTTGATTCAAAGGATGCCAAGTCTATCGTTTGTGCCGACAT
TTCTCCGGTTCAAAGACCGTCAAAAACATGGAAAAAGAAGGAAGGGATAT
TACTAGACCATGAATGGAACCAGAGCAGAATCAATGCAGTAACACCTATG
GCTCATTTGTTTCTTGACGACTCCAAAAACGAGGATTCTCACTCTATTCT
TAGATCAGGTTAGacgATCGCCGCCGGAAGAGGAGCTCCACTCAAATGCG
TACAGTTTCCCGAATTGACAGTCCTTCTGGAGAACATATTTGCCGAGAGC
GGTCTTGAAAGCCATCCCAGGTTGACAGACGATATTTTGTACCGTGCAAC
GAGCAATGCATTGACGATGACAAAAGCCCGCGAAATTCTTTTATCACTTG
CGccggaaaattttaaaatttgtttatcGACTTGTTTCAACTACACACAA
AATTTTAAGGCCGGGACAGCTCAGGCTAAACGTCATCACGAGGGTAGAGA
TATTAATGCTTGCATCTCTCTTCATCCACCTCCAAGAATTGGTACAGAAA
AACCTTCGCCTAATTTACATTGGTCTTCCTGTAATGTCAGCCTCATGTTG
TCAAATCGTGTAGATGACACCATTTTTGATTCAAAGGATGCCAAGTCTAT
CGTTTGTGCCGACATTTCTCCGGTTCAAAGACCGTCAAAAACATGGAAAA
AGAAGGAAGGGATATTACTAGACCATGAATGGAACCAGAGCAGAATCAAT
GCAGTAACACCTATGGCTCATTTGTTTCTTGACGACTCCAAAAACGAGGA
TTCTCACTCTATTCTTAGATCAGGTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000067_pilon | genome | sc0000067_pilon:1003503..1005290 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 550-1164:1174 |
| Aaloc | 1-549:1 |
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