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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000067_pilon:325785..328535- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_025107 ID=XLOC_025107|Name=XLOC_025107|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2751bp|location=Sequence derived from alignment at sc0000067_pilon:325785..328535- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATCAAACAGACGGATATAAAGTCAATTTTACAGAAGGATCAGCTCC
TTATTGGAGAGTGCATTGTGATTCACCGTACAAGTTGGTTCAATCATCAG
CAGATTACATTAAAACACTAAATGAAGCGTCTAATGTGAAAGCGCAATTC
ATTTTATTGTCAGGTAACTGCTTTGATAATGTGGTTCATTTCTGAATTTA
AGAAGGAATTGCAAAATTTCAGTATGTAAAAAATCTATAAATAAATTTTG
TAAAGCTCACTTTTACTGGAAATGGCAAATCAGCTCAGCATTGTTCTTTA
AGTTATTCTTAGTTTCTGAGCCCTGTTTTTCTAATAAAATTGTTATTTAA
GCAATAGAGTAAAAGAGTATCACAAACCATCACTTTTTTTTAAATTTAAA
ATGCAAGGTGTGTTACTGTGTACAGTATATGGGGGGTAACATTTTCTTTG
TTTTCATTGTTGTTTTTATTTAAAGGTGACCAAGCAGCTCATGCTTACTC
TAAATTTACTGAAGTGGATGCATACAAAAGTTTAGTGTGGTCATGTTCTC
TTTTTGGTCAATAAGCTTTTGTCAATTTCTACATAGCAAGTTTTTCTTAA
AGTATGTAAAATTCATAATGTTTGAATCTTCCTAATTCAAGTTATATCAT
TTTAATTTTCATATTTTATTGTACTTTTTTGCAGGAAACAATGATATCCC
CCTTCATTATAATCCACCAGTTGAACACCCTGAGTCGTTTTATGGAGACC
TATCAAAGGAAGTAACCAAGTACATCTTTCCAAAGAGCTCTGTGTTGGCT
GAATTGAACAGTGTCAAAGAATTCAATGAATCCTTTCTACAAGGGGGTTA
TTATGCTGTCAATGTTTCAGGTAAGAAATTTTGGAACAATTTTTCACAAA
ATTATAGTAAACAAAAATTGATAAAAACAACCAGATTTTTTCCTAGGTTA
TTCAGTAGATGTCTGATTTGTCAGGTATGGAAAGGTTGTATAATCAACCA
GTGTAACTAAGCTAACAAATTTTGCAAATGTTAGAAAGTTTGTAAACAAT
AAATCAAAATAAACCTAATGCACAGATCTGGGACTTTTATAAGAGTGTGG
GAAATCAATATCTTGGAGGGCCTAAAACTGTCAGGCCTTAAACTTCACTG
GCAGCTAAATTTTCGTTGGAGAGCTTTAGGCCATAACACTCCTGAAATTA
TAGCAGTTATAGTAATGAAAACCACTGTAAGAAATTTTGATTATGTTATT
ATTCCAGAAGCTATATAGCAACTTTTCAATATATTCCTTATAGAATTTCT
GCAACTCATCACGTTGAGTACAAACTATTGGAACTCAAGATGCTTTACAA
TCAATCCAAGTATTACCACCATTGGTGATCGCCAAATGAAATGGCTGGAA
AACACTTTCAAAACTGCTGCAGCATCGAACAAAAAAGTTTTGGTCTCAGG
ACACATCCCAGCAGGGTAACAATTCCTTTTGGACTTTCTTTAGATTGTTA
TAAAGTTGTAAAAATATTCATTGACAACGGTAAAATTCCCCCATTGACAT
ACAATGTATTTGGATTGGGGAGAAAATACTTAGCCATTCGTCTCAGAAAA
TCATGAAAAACATTTGTGCAATTAGGAAAATACTTATATCTAAATTTTCT
CAAAATCACTAAAAAACAGACTTTGGCCCGTTATGATGAAATTCTTTCAA
TTTCTATAGTATTTCAGCTTACAAAGATGAAGGGAGTTTTTGGTTGAAAA
ACTACACAACAGTTTACGTCAAACTCATGACTGATTTTGCAGACATTATA
ACATTAGGTAAGAATGTTACTTAAATCAATGAAAACAAGAGCTTTTGCAA
ATCAATTGAAATTAATTTTAAAGGTTCAAGAAAAATAAAGAGCGGTGGAT
AGAAAATTGATTCTTTTCCAAATAAAATAAAAGCTTTGTTTCTATTTCAG
GGCAGTTTTATGGACATGCACATAAAGACAAGATCAAAATTCAAAACGTT
CACAATTCTTTCTATCCAAATACACAACCTTCAATACCAAAGGCTTTTCT
TTTGATGTCTCCAAGCATTACACCCATCCAAGGAAATAATGCTGCCTTTC
GTTTGTTTACTTTGAGTAAAGATCTTGAGCTGTCTGATTATACACAATAT
TATATGGATTTTATACTTGCTAATGGTAAGAAAAAATAGTTCTTGCACCA
ATTTTCTTTATTTTCACCCACTATTTTATCCTTATTTTGATATATGACTT
CCTTCTTGACTAAGTTTCCCAATAAATCTTTGCAATTCAAGTTTAACATT
TTTGAAAATGGCTTCCTTTTTTAATACCAGTTTTGAGAAAAGAATGTCTT
AAAATTTTCTTCCATCTCTTTCTTTACGATGACACCATTGTCCATTAGCA
TTTTGTATTTTAAAACTTTACATTAGTTTGGACACTGGTTTTGTTATTGC
AATAAATGGTAACTATCTTTCATATCCTTTTTCAGTATTTTCAAAGCCTT
CATGGAAAAAAGAATACACGTTCTCTGAATGTTATGGGGCTAGTATCTCA
GCAAAATCCATCCAAGATATTGTACAGAATGTCATCTCCTCATCTGACAA
CTCAACCTGGGTACGTTACATGACTCATATGAGAACGTTGTATGGTGGTT
TTTCAACTGAAGTTATGTTCAGAGAGTATTGTGGTGCACAACATTTTACT
TTGGAAGCTTACTTAGCTTGTGTGAAATATTATGAGACCAATGGATTTTG
A Coding sequence (CDS) from alignment at sc0000067_pilon:325785..328535- >XLOC_025107 ID=XLOC_025107|Name=XLOC_025107|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2220bp|location=Sequence derived from alignment at sc0000067_pilon:325785..328535- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATCAAACAGACGGATATAAAGTCAATTTTACAGAAGGATCAGCTCC
TTATTGGAGAGTGCATTGTGATTCACCGTACAAGTTGGTTCAATCATCAG
CAGATTACATTAAAACACTAAATGAAGCGTCTAATGTGAAAGCGCAATTC
ATTTTATTGTCAGATGAATCAAACAGACGGATATAAAGTCAATTTTACAG
AAGGATCAGCTCCTTATTGGAGAGTGCATTGTGATTCACCGTACAAGTTG
GTTCAATCATCAGCAGATTACATTAAAACACTAAATGAAGCGTCTAATGT
GAAAGCGCAATTCATTTTATTGTCAGGAAACAATGATATCCCCCTTCATT
ATAATCCACCAGTTGAACACCCTGAGTCGTTTTATGGAGACCTATCAAAG
GAAGTAACCAAGTACATCTTTCCAAAGAGCTCTGTGTTGGCTGAATTGAA
CAGTGTCAAAGAATTCAATGAATCCTTTCTACAAGGGGGTTATTATGCTG
TCAATGTTTCAGGAAACAATGATATCCCCCTTCATTATAATCCACCAGTT
GAACACCCTGAGTCGTTTTATGGAGACCTATCAAAGGAAGTAACCAAGTA
CATCTTTCCAAAGAGCTCTGTGTTGGCTGAATTGAACAGTGTCAAAGAAT
TCAATGAATCCTTTCTACAAGGGGGTTATTATGCTGTCAATGTTTCAGAA
TTTCTGCAACTCATCACGTTGAGTACAAACTATTGGAACTCAAGATGCTT
TACAATCAATCCAAGTATTACCACCATTGGTGATCGCCAAATGAAATGGC
TGGAAAACACTTTCAAAACTGCTGCAGCATCGAACAAAAAAGTTTTGGTC
TCAGGACACATCCCAGCAGGAATTTCTGCAACTCATCACGTTGAGTACAA
ACTATTGGAACTCAAGATGCTTTACAATCAATCCAAGTATTACCACCATT
GGTGATCGCCAAATGAAATGGCTGGAAAACACTTTCAAAACTGCTGCAGC
ATCGAACAAAAAAGTTTTGGTCTCAGGACACATCCCAGCAGGTATTTCAG
CTTACAAAGATGAAGGGAGTTTTTGGTTGAAAAACTACACAACAGTTTAC
GTCAAACTCATGACTGATTTTGCAGACATTATAACATTAGTATTTCAGCT
TACAAAGATGAAGGGAGTTTTTGGTTGAAAAACTACACAACAGTTTACGT
CAAACTCATGACTGATTTTGCAGACATTATAACATTAGGGCAGTTTTATG
GACATGCACATAAAGACAAGATCAAAATTCAAAACGTTCACAATTCTTTC
TATCCAAATACACAACCTTCAATACCAAAGGCTTTTCTTTTGATGTCTCC
AAGCATTACACCCATCCAAGGAAATAATGCTGCCTTTCGTTTGTTTACTT
TGAGTAAAGATCTTGAGCTGTCTGATTATACACAATATTATATGGATTTT
ATACTTGCTAATGGGCAGTTTTATGGACATGCACATAAAGACAAGATCAA
AATTCAAAACGTTCACAATTCTTTCTATCCAAATACACAACCTTCAATAC
CAAAGGCTTTTCTTTTGATGTCTCCAAGCATTACACCCATCCAAGGAAAT
AATGCTGCCTTTCGTTTGTTTACTTTGAGTAAAGATCTTGAGCTGTCTGA
TTATACACAATATTATATGGATTTTATACTTGCTAATGTATTTTCAAAGC
CTTCATGGAAAAAAGAATACACGTTCTCTGAATGTTATGGGGCTAGTATC
TCAGCAAAATCCATCCAAGATATTGTACAGAATGTCATCTCCTCATCTGA
CAACTCAACCTGGGTACGTTACATGACTCATATGAGAACGTTGTATGGTG
GTTTTTCAACTGAAGTTATGTTCAGAGAGTATTGTGGTGCACAACATTTT
ACTTTGGAAGCTTACTTAGCTTGTGTGAAATATTATGAGACCAATGGATT
TTGATATTTTCAAAGCCTTCATGGAAAAAAGAATACACGTTCTCTGAATG
TTATGGGGCTAGTATCTCAGCAAAATCCATCCAAGATATTGTACAGAATG
TCATCTCCTCATCTGACAACTCAACCTGGGTACGTTACATGACTCATATG
AGAACGTTGTATGGTGGTTTTTCAACTGAAGTTATGTTCAGAGAGTATTG
TGGTGCACAACATTTTACTTTGGAAGCTTACTTAGCTTGTGTGAAATATT
ATGAGACCAATGGATTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000067_pilon | genome | sc0000067_pilon:325785..328535 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 844-1107:265 |
| Aaloc | 619-840:800 |
| Aaloc | 523-615:1042 |
| Aaloc | 352-519:1457 |
| Aaloc | 166-348:2066 |
| Aaloc | 1-162:2752 |
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