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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000465_pilon:12300..14178+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_025048 ID=XLOC_025048|Name=XLOC_025048|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1879bp|location=Sequence derived from alignment at sc0000465_pilon:12300..14178+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTACAACAAAGGAGAAATATCACGTGATTCGCACATATACTGGAATAT
AATGGTCTGGTGATGTTGAACTTCAAAGCCTTTTATACACCTATAGACCT
TTTACTAATCAGGATGTCATGTTAAATAATTAAAACTTAAATGTGTCATA
TTGTTTTATTGTTGGATTTAAAAATTCTATACCTCTCTTCAATTATTTAA
CCATTTTAATTGGAAGTAGAGAGAAAAATTCTAATATGCAAAAGTTAtcc
tgaaatgaaagaaaatgtatttctttgaaattatgcttaaaaatttggaa
acaaTCAACATTATACATTGACACTTCATCGATTGAGCTAAGGTATTTTA
CTCAGAAAAGTGACTGTTTACCTGTCTTCTTTTATTTCAACAGAGGAGTG
ACATACAAATACCTCAGATCGCTTTGATTAATTCAAATGATGAACATGTa
agtaaatattttctggtACAATTTCTTTACTGCGTATTCATTATACATTT
GTAAAACATAAACTATAATTAAGTATAggtattgaaaattttaatctgTT
AAGTATCAaataccggggggggggggggggtacttaggcaaaaatggatg
atgggtatgtgcggacggtaaagGTCGGTTTTtacacctttcaaagtctc
tctaagggtcggaagatttttaggaaattttttgatttccagagaaaaat
ttgtactaaagtctctctaagggtattacttttttcaaaaatcgaaaaaa
agaattcaaaaagtctctaagggtcaccttttcagcaaaaatcagtctct
aagggtcggtttttggaggtcctgTCATTACAtgcccctcattcgccaac
cctagtaccccccgtttatcaaatacattttaaaatctGTACAAAATAAT
TAACAACGAGTGTGTACTTTTCATTATGGGAACATGATCGAGATCTTGTG
AGATAATCATAGAATATGTACCATCAGCTGTAGTGGATAATTATAATATA
AGATATTTGAAAGCAATGTAATGCAGTTTATTCATGGTTAAACatcacac
ttttttttttgattctttctttttcaggttGGAAGAAAGAACAGCACATA
TACCAATAGCAAGTTTTCTGATGAAGATTCTTCCGACTCGTCTAGCGATT
CTGACAATGAAGAGGTATTTTTCTAATATTATGTGAACATTTTGATCGTC
ATGTGTCATCAGTGGTAGTGTATAGTTAAGATGTTTGAAAGCAATGTAAT
GCAGTTTATTCATGGTTAAACATCACActaataattttgattctttcTTG
TTTCAGACTGGAAGAAAGAACAGCACATTTACAAATAGCAAGTTTTCCGA
TGAAGATTCTCTCCAGACTTGTCTAGCATTTCTGACAATGAAGAGGTATT
TTTCTAATATTATGTGCGCATTTTGATCGTCATGTGTCATCAGTGGTAGT
GTATAGCTAAGATGTTTGAAAGCAATGTAATACAGTTTATTCATGGTTAT
AAACATCACACTAtttttttgattctttctttttcagactGGAAGAAAGA
ACAGCACATTTACAAATAGCAAGTTTTCTGATGAAGATTCTCCCGACTCG
TCTAGCGATTCTGACAATGAAGAGGTATTTTTCTAATATTATGTGAACAT
TTTGATCGTCATGTGTCATCAGCTGTATTGTATAGCTAAGATATTTAAAA
GCAATGTAATGCAGTTTATTCATGGTTACAAACATCAcactatttttttt
tattctttctttttcagactGGAAGAAAGAACAGCACATATACAAATAGC
AAGTTTTCCGATGAAGACTCTCCAGACTCGTCTAGCGATTCTGACGAAGA
GGTATTTTTCTAATTATGAGAGAACATGA Coding sequence (CDS) from alignment at sc0000465_pilon:12300..14178+ >XLOC_025048 ID=XLOC_025048|Name=XLOC_025048|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=966bp|location=Sequence derived from alignment at sc0000465_pilon:12300..14178+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTACAACAAAGGAGAAATATCACGTGATTCGCACATATACTGGAATAT
AATGATGTACAACAAAGGAGAAATATCACGTGATTCGCACATATACTGGA
ATATAATGAGGAGTGACATACAAATACCTCAGATCGCTTTGATTAATTCA
AATGATGAACATAGGAGTGACATACAAATACCTCAGATCGCTTTGATTAA
TTCAAATGATGAACATgttGGAAGAAAGAACAGCACATATACCAATAGCA
AGTTTTCTGATGAAGATTCTTCCGACTCGTCTAGCGATTCTGACAATGAA
GAGgttGGAAGAAAGAACAGCACATATACCAATAGCAAGTTTTCTGATGA
AGATTCTTCCGACTCGTCTAGCGATTCTGACAATGAAGAGACTGGAAGAA
AGAACAGCACATTTACAAATAGCAAGTTTTCCGATGAAGATTCTCTCCAG
ACTTGTCTAGCATTTCTGACAATGAAGAGACTGGAAGAAAGAACAGCACA
TTTACAAATAGCAAGTTTTCCGATGAAGATTCTCTCCAGACTTGTCTAGC
ATTTCTGACAATGAAGAGactGGAAGAAAGAACAGCACATTTACAAATAG
CAAGTTTTCTGATGAAGATTCTCCCGACTCGTCTAGCGATTCTGACAATG
AAGAGactGGAAGAAAGAACAGCACATTTACAAATAGCAAGTTTTCTGAT
GAAGATTCTCCCGACTCGTCTAGCGATTCTGACAATGAAGAGactGGAAG
AAAGAACAGCACATATACAAATAGCAAGTTTTCCGATGAAGACTCTCCAG
ACTCGTCTAGCGATTCTGACGAAGAGGTATTTTTCTAATTATGAGAGAAC
ATGAactGGAAGAAAGAACAGCACATATACAAATAGCAAGTTTTCCGATG
AAGACTCTCCAGACTCGTCTAGCGATTCTGACGAAGAGGTATTTTTCTAA
TTATGAGAGAACATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000465_pilon | genome | sc0000465_pilon:12300..14178 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 373-483:1769 |
| Aaloc | 286-369:1539 |
| Aaloc | 196-282:1307 |
| Aaloc | 109-195:1078 |
| Aaloc | 55-108:394 |
| Aaloc | 1-54:1 |
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