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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000304_pilon:33018..38366- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_024976 ID=XLOC_024976|Name=XLOC_024976|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5349bp|location=Sequence derived from alignment at sc0000304_pilon:33018..38366- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTTTTTCTAAGATCCTTTTGTTGGTCAGCTTATTAAGCCTGGGAAA
CCTACCAGAGACAGGTGGTTTAAGTCAAGAGGAACAGTTATGTAAATATT
CCTTTCCCAACGAACCTGGCAAAGCTTATGTATGCATGGGCGTACGTGGA
TTAGCCAATCACGTTCCAGCAGGTGCCGTCCTTATTTTCGCCCTGGATTA
TTGGTTTGGTATTGATCCTAAACCCTGGGATTTGGTGAAAAAAGATGTGG
AAAAACTGATTGATGAGAAATTTGACGCGTATACGATCAAATCGATGAAC
CAATGGCATCAATCAATGTCGAATCGAGTCCAATCGTGTAAACGAAAAAT
CAACCCTACTATTCGTTTTTCATGCTACAAGAATCTGCAAGAAGATTTAT
CAGGTTATGAACCTCTGTTTCGTGGTACCACTACTAAAGAGATTGCAATG
TCTATTAAATATTACGATATCTTTGTGACAACTTATATGTCTGTGTCACA
CGTGCTTCGTAACATGTCCAGTCCAACAATGCAAGCGTCCATCGACCGTG
ATATCAAATTCAAAGCTAAAAAGTTTGCTACTTATTTGACCAGAGCTGTT
AAAACCACCAAAGGATATAGCTGCCGTTATATCAAAGTCAAATTAGAAGA
AAGTTACGTGTTGTGGAAAGAAGATCGTTTAGTTTGGCCTAAAGATGAAG
ATATCCCGAAATATCTGGATTCAAGAATCGAAGACGTCCGAAAGGAACTG
ACAAACAGTTCTCACAAATGCCGTTACTACGACACAACCAATTCATACAT
CTCCAAAGTTATTGATATCAGAGACGGTAGCGAGTATCCAGGGGGTGGCT
TCCAGTATAAATACTGTCGCAATAGTCTTGCGATTGCTGATATGGTCCCC
CTGACGTTCGCTTATTGGAAACCTTTCATGAAGATGTGTGGTGATTCTGA
TGATAAGAAATGGATCCATAAAATCGAAGCTCGATTGGAACTCTTGAAGC
ACATGTGATTGTAAGCGTGGTGAAGAGCAAGAGAAAATATTCAAAATTGG
TTATAAATTTCGGAAAGTTTTTATCTAAAGTCGACGCTCTCTAATTCAAC
ATTCTACTAACGATTTATTATTTAATAATATTGAAAGAAACTATCTACAA
TTCGATACGGTCCATTCTTCGAAAAAAATCCCCCTTGAAATCGAATCAGA
GAGCACCAAATATATCATGAATTTCAATTTTTATAATATTTATACTGTAC
GAATATTTGTTGTTTGAAAAATATCCGATGAATTCGATGACATTCATGAT
AAACCTACCTACCGTCTTACCTTTACGAAAAACCCAAGTACACCTTTGTC
TCGCAGCCTCGGTGAAACTTTTTCCTACAGCAGGGATGAAAAGTTCGATT
GAAATCTCAATAGGGATAAAAATTCTATTGTTCCAAGGTTAAAAGATCCA
GTGGGGATGGTTTCGGAGTACAATTTCAAAACAATGAATTTCAAATCGAG
ATGGAATCAAAGTCAATTTCTCAATGGGACTAAAATTCTAGGGTATTTTT
TCCCACCGGGGACGAATGTCTGCCAAATTTTCCAGTGGGGCTGGGGCCCC
AGCGGGTCTGTGATACAGTGCTGTCCAAGTACATGTTAAAGTTTTTTGTT
TTGGGCAAAAATAATTTGAGGTAAAGTGAGACCAAATTCCTCAATGAGAA
TTTTCCCTGTCAATTTTATCAGATTATTTAGATTATTAAGCTCTTCTCTG
ATTAATTCTTAGCATGACTCCCTTGATAAACCGTCACCCTTAAAAAAATT
TCCTGTCTTGTCGTTAGTTTCACTGACAATTCTCGGATTACTGGAGTGCG
TGTATTCGTACAGCACTAGAGGACCACGTTTTATTACTGTAAAATATACA
CTGATGGAAGGGTAATTTGAAGGCAAAATTTCCATTTGTTTTGGAAAAAT
GAAACAATATAGTATACAAGAGTGGGGAGTGAACTGGAATGAACTATTAA
GTGAACAGTTATTCATACGAACACCCAAGTTTACTTATTAACCTTTCCTC
CGTACATTTTCCTGAACAGCCATGTAGTATTTAATTTTTGAGAGCATTTT
TCAAAGTTCATTATTTTGCCGATTCCCCGTTTACTCAATTTTGAGGTTTT
TGTCCTTTTTGGTATCCTAATTTATTTTACAGGCTTCACATAAAGTCTTC
TGATTTGGCCAATGAGCCATTCCATTTTATATCCGTACATGGGGAGGGTA
GACAAACATTTCCAGGGGGTAATTCGAGAAGGTTTTTGAGGTGCTCTAAA
GAGTTTTTTCTTTACTTTTCCAGAGGGTACAAAACATTTATTCTAAAATT
TCAATTCGTCGTCCAAAATCCATCACAAATCTCAATATTTTCTGTGCATA
ACAGTTTAACTTTCTCTGAAATTCACCTGTGAGGACAAACTATAAGAAAT
TTATTGCGAATCTCTCAATTACATTACTAATTCAAAAAAAACGAACATGG
AGGTGGATGGAATTTAATCGATTCTTAACTGTATAAAGAATTTGTATGGT
ATGTGTTTTACGCTTTCTTTCACTTAATCTTCTCTACCTTTCTTACTTAT
AATTTGAGTGGTATAACCCTCATTCAAGATCCTGGATGGTTCCCATGGTA
ATTTCTGAATGAATCTATTGTAGGCTGTAAGCAACCCCTCCGATATGTTT
TGATCTATTGGATGCTAATCGTGTATAAAATTTCCGTCCAAGAGTTACCC
CAAACTTGGGGTAACCTGTTTCAATTTTCTTAAAAAGGTTAAGAAACCCA
ATGCCAATGCCCGGGGGGGGGCACTCGATTTCGAAACGACGGATTATGCC
GCGTAAAATCTGCTTTTGAAAATCGTACCCTTACAGTGCAGTTAAATATG
ACTGAAAAGGTACCCTTTCAGTGCATTTTGTCTTCATTTACCCAACCCTT
ATAGTGCACTATATTTCTCAGCTGTAAATCTGCGTGAAAGAAGAAGCTTG
GGAAATTTTCTGTTTCAAAGAAAAACTGAGAAAATTATTCTTGTCAGCTG
TAATTATCAGACAATAGAAACTTTTTCAAACAAACGCCCGAGAAGTAAAA
ACCTTTATTTTTAACAATTATTTTGAATTTGTTTTAAAATTCGACCCTTG
CAGTGATATCTCACAGAAACACACCCTTACAGTGCATTTTGGGATGCTGA
AAAACCCCACCCTTAAGCGCGGCACATGACGTAGGCCAGATCATACGAGT
GCCCCCTGGGATCCAATGATCATATCAATCTCTAACCATTCAAACTTTAA
TTTATTTCAAATTTAATGAAATCAAAAGATCTCTCATATAAAACTTACTA
ATCAAGTTTCTAAAACTCAAAAACACAAAAACGGGGATAGCTCTCGGACG
GGAATAGTATACACGTTCCGCGTCCCCTTTATCAAAACATATCAGAGGCG
ATACATGCAGCTTTGATCTGTCGTCACAATGTAATGTTCATACAATGGGA
TACTTACTGTACTAAAATCAAGCTAGACGATATTATCGTCTGTCGCAGAG
ATAGTATACGCTTCGGTTGATTTTTCCCTTTTACCCTGACACTTACACTC
ATAATAGCCAATTGTTTGAAGCTAAAACCCTTATTGTCTAAATCTCATTA
CCCCGGGTCTTTTATCGCCTTCATAATGGGAGACGTGAATCGAAAGATGG
GCTCCTTTGATTCCTCAGTAAAAATCTTTCTCGCCCCTCTCCACCTGTCT
TATTATGGTTTCAAGTAACCCTTATAAGTGGAAAAACATGTTGGAACAAT
TCTACCCCAAAATTTACCATGGGAGAATTTTGAAGAAACGCTAACTCTAC
ACCAGTAAACTCGCTTCAACAGCAGAACTCATTCCTGGATTTTCCTCCGG
AACTTATTCCTTAGATAGTTAGTCTTAGACAAAAGATGAAATCAAGCCAT
CTGACCAAGCGGTATCAATTATTCCCTCTAGCGGCTCGGTTCTGTAAGTC
ACGTGGAGATTGTCGCACAAACTTACGTCACCATCAAAGACGTTAGTAGT
TTTAAAGTGATTTCGTGATTCGATTAGACGTTAAAGAAGAAAGAAAGAAT
ATTAAAATAAAATATTTGGAATCAATAGTAACAGCTTATTCAGGTGTGTA
AATCTCTCATGTTTGGACTATCGCAAGCCATTCCATCCATACGAAGGAGA
AAATATTTTCCTTTAAAGGATGTGCGACGGTAGAAGCCCTGGTAGATCTC
CTCCATATTTAAAAAATGACATCAAAGTGAAATATCATGTTACTTCAGTT
CAAATCTTATTCACCATCGCGTTTTCTACCAGTCAAAGATGGCAACATCT
TTAACATTTCTACTTTGCGCTTTAATAGCTTTAAGTTATTTACAACAAGC
TGATGGTTTAAGCTCGGAAGAAGAGCTTTGCAAATGGCAATACCCTGACA
GTGAAGTACAAAAATATGTTTGTATGGGAATCAGAGGTTTGGCGTCGCAT
ACACCATTTGACCAAGTAGTGCTTTTCGCAATGGACTACTATTATGGCAT
CGATCCTACACCTTTTGATATCATAAAAGACCAAGTGGAACGTCTTATTG
ATACCAAGATGGAGGAATACACAGTCAAACAAATGAAACGGTGGCATAGA
TCCATGTCAGCTCGTGTCCAGTCCTGTAGACGGAAGATCGATAAGAATAT
TCAATTGTTCTGCTACAAGAATTTGTTAGAAGATTTATCAGGATACGAAG
CTCAGTTCAGAGGTCAAAACACCAACGAGGTTGCAATGTCTATCAAATAT
TATGATGTCTATGTCACCACTTATCTGTCAGTGTCCTACATGTTACGTAA
CATCTCTGGACCAGCACAACAAGGAAGTATTGACCGAGATCTCAAATTCA
AAGCTGGTATTTTTGCTCGGTATTTGGAAAGAGCCGTGGACATCACTAAA
GGATATACCTGTCGTTACATCAAAGTCAAGCTTGTAGAAGATTACATCTT
TGTGAAAACAGAACGCTTGGTTTGGCCTGATGATCGAGAGATTTACAAAT
ACATGAATTCCAGCCTTGATTTTGTGGATATCCGTGAAGAATTACTGTCA
AACAAGAGCAAGTGTGGCTTTTTCGACCATCGCAACAAATACATATCCAC
TGTTATCGATGTCCGTGATAACACAGTGTATCCTGGTGGTGATTTCTCGG
ACAGATATTGTCGCACAGATCTCGCAATACCTGGATTGGTCCCACTCTCC
TTTGTCTACTGGCGCGTTTTCATGAAGAAATGTGGAGCGGCCGACGACAA
GGAATGGATTCGAAGGATTGGAAATCGCGTACAAGTCCTCAAAGAAATG Coding sequence (CDS) from alignment at sc0000304_pilon:33018..38366- >XLOC_024976 ID=XLOC_024976|Name=XLOC_024976|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2136bp|location=Sequence derived from alignment at sc0000304_pilon:33018..38366- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTTTTTCTAAGATCCTTTTGTTGGTCAGCTTATTAAGCCTGGGAAA
CCTACCAGAGACAGGTGGTTTAAGTCAAGAGGAACAGTTATGTAAATATT
CCTTTCCCAACGAACCTGGCAAAGCTTATGTATGCATGGGCGTACGTGGA
TTAGCCAATCACGTTCCAGCAGGTGCCGTCCTTATTTTCGCCCTGGATTA
TTGGTTTGGTATTGATCCTAAACCCTGGGATTTGGTGAAAAAAGATGTGG
AAAAACTGATTGATGAGAAATTTGACGCGTATACGATCAAATCGATGAAC
CAATGGCATCAATCAATGTCGAATCGAGTCCAATCGTGTAAACGAAAAAT
CAACCCTACTATTCGTTTTTCATGCTACAAGAATCTGCAAGAAGATTTAT
CAGGTTATGAACCTCTGTTTCGTGGTACCACTACTAAAGAGATTGCAATG
TCTATTAAATATTACGATATCTTTGTGACAACTTATATGTCTGTGTCACA
CGTGCTTCGTAACATGTCCAGTCCAACAATGCAAGCGTCCATCGACCGTG
ATATCAAATTCAAAGCTAAAAAGTTTGCTACTTATTTGACCAGAGCTGTT
AAAACCACCAAAGGATATAGCTGCCGTTATATCAAAGTCAAATTAGAAGA
AAGTTACGTGTTGTGGAAAGAAGATCGTTTAGTTTGGCCTAAAGATGAAG
ATATCCCGAAATATCTGGATTCAAGAATCGAAGACGTCCGAAAGGAACTG
ACAAACAGTTCTCACAAATGCCGTTACTACGACACAACCAATTCATACAT
CTCCAAAGTTATTGATATCAGAGACGGTAGCGAGTATCCAGGGGGTGGCT
TCCAGTATAAATACTGTCGCAATAGTCTTGCGATTGCTGATATGGTCCCC
CTGACGTTCGCTTATTGGAAACCTTTCATGAAGATGTGTGGTGATTCTGA
TGATGGGTTTTTCTAAGATCCTTTTGTTGGTCAGCTTATTAAGCCTGGGA
AACCTACCAGAGACAGGTGGTTTAAGTCAAGAGGAACAGTTATGTAAATA
TTCCTTTCCCAACGAACCTGGCAAAGCTTATGTATGCATGGGCGTACGTG
GATTAGCCAATCACGTTCCAGCAGGTGCCGTCCTTATTTTCGCCCTGGAT
TATTGGTTTGGTATTGATCCTAAACCCTGGGATTTGGTGAAAAAAGATGT
GGAAAAACTGATTGATGAGAAATTTGACGCGTATACGATCAAATCGATGA
ACCAATGGCATCAATCAATGTCGAATCGAGTCCAATCGTGTAAACGAAAA
ATCAACCCTACTATTCGTTTTTCATGCTACAAGAATCTGCAAGAAGATTT
ATCAGGTTATGAACCTCTGTTTCGTGGTACCACTACTAAAGAGATTGCAA
TGTCTATTAAATATTACGATATCTTTGTGACAACTTATATGTCTGTGTCA
CACGTGCTTCGTAACATGTCCAGTCCAACAATGCAAGCGTCCATCGACCG
TGATATCAAATTCAAAGCTAAAAAGTTTGCTACTTATTTGACCAGAGCTG
TTAAAACCACCAAAGGATATAGCTGCCGTTATATCAAAGTCAAATTAGAA
GAAAGTTACGTGTTGTGGAAAGAAGATCGTTTAGTTTGGCCTAAAGATGA
AGATATCCCGAAATATCTGGATTCAAGAATCGAAGACGTCCGAAAGGAAC
TGACAAACAGTTCTCACAAATGCCGTTACTACGACACAACCAATTCATAC
ATCTCCAAAGTTATTGATATCAGAGACGGTAGCGAGTATCCAGGGGGTGG
CTTCCAGTATAAATACTGTCGCAATAGTCTTGCGATTGCTGATATGGTCC
CCCTGACGTTCGCTTATTGGAAACCTTTCATGAAGATGTGTGGTGATTCT
GATGGATTGGTCCCACTCTCCTTTGTCTACTGGCGCGTTTTCATGAAGAA
ATGTGGAGCGGCCGACGACAAGGAATGGATTCGAAGGATTGGAAATCGCG
TACAAGTCCTCAAAGAAATGGATTGGTCCCACTCTCCTTTGTCTACTGGC
GCGTTTTCATGAAGAAATGTGGAGCGGCCGACGACAAGGAATGGATTCGA
AGGATTGGAAATCGCGTACAAGTCCTCAAAGAAATG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000304_pilon | genome | sc0000304_pilon:33018..38366 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 955-1068:115 |
| Aaloc | 1-951:5350 |
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