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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000304_pilon:33027..37760- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_024975 ID=XLOC_024975|Name=XLOC_024975|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4734bp|location=Sequence derived from alignment at sc0000304_pilon:33027..37760- (Clytia hemisphaerica_ch_hm2_pilon)
ACCAAAGGATATAGCTGCCGTTATATCAAAGTCAAATTAGAAGAAAGTTA
CGTGTTGTGGAAAGAAGATCGTTTAGTTTGGCCTAAAGATGAAGATATCC
CGAAATATCTGGATTCAAGAATCGAAGACGTCCGAAAGGAACTGACAAAC
AGTTCTCACAAATGCCGTTACTACGACACAACCAATTCATACATCTCCAA
AGTTATTGATATCAGAGACGGTAGCGAGTATCCAGGGGGTGGCTTCCAGT
ATAAATACTGTCGCAATAGTCTTGCGATTGCTGATATGGTCCCCCTGACG
TTCGCTTATTGGAAACCTTTCATGAAGATGTGTGGTGATTCTGATGATAA
GAAATGGATCCATAAAATCGAAGCTCGATTGGAACTCTTGAAGCACATGT
GATTGTAAGCGTGGTGAAGAGCAAGAGAAAATATTCAAAATTGGTTATAA
ATTTCGGAAAGTTTTTATCTAAAGTCGACGCTCTCTAATTCAACATTCTA
CTAACGATTTATTATTTAATAATATTGAAAGAAACTATCTACAATTCGAT
ACGGTCCATTCTTCGAAAAAAATCCCCCTTGAAATCGAATCAGAGAGCAC
CAAATATATCATGAATTTCAATTTTTATAATATTTATACTGTACGAATAT
TTGTTGTTTGAAAAATATCCGATGAATTCGATGACATTCATGATAAACCT
ACCTACCGTCTTACCTTTACGAAAAACCCAAGTACACCTTTGTCTCGCAG
CCTCGGTGAAACTTTTTCCTACAGCAGGGATGAAAAGTTCGATTGAAATC
TCAATAGGGATAAAAATTCTATTGTTCCAAGGTTAAAAGATCCAGTGGGG
ATGGTTTCGGAGTACAATTTCAAAACAATGAATTTCAAATCGAGATGGAA
TCAAAGTCAATTTCTCAATGGGACTAAAATTCTAGGGTATTTTTTCCCAC
CGGGGACGAATGTCTGCCAAATTTTCCAGTGGGGCTGGGGCCCCAGCGGG
TCTGTGATACAGTGCTGTCCAAGTACATGTTAAAGTTTTTTGTTTTGGGC
AAAAATAATTTGAGGTAAAGTGAGACCAAATTCCTCAATGAGAATTTTCC
CTGTCAATTTTATCAGATTATTTAGATTATTAAGCTCTTCTCTGATTAAT
TCTTAGCATGACTCCCTTGATAAACCGTCACCCTTAAAAAAATTTCCTGT
CTTGTCGTTAGTTTCACTGACAATTCTCGGATTACTGGAGTGCGTGTATT
CGTACAGCACTAGAGGACCACGTTTTATTACTGTAAAATATACACTGATG
GAAGGGTAATTTGAAGGCAAAATTTCCATTTGTTTTGGAAAAATGAAACA
ATATAGTATACAAGAGTGGGGAGTGAACTGGAATGAACTATTAAGTGAAC
AGTTATTCATACGAACACCCAAGTTTACTTATTAACCTTTCCTCCGTACA
TTTTCCTGAACAGCCATGTAGTATTTAATTTTTGAGAGCATTTTTCAAAG
TTCATTATTTTGCCGATTCCCCGTTTACTCAATTTTGAGGTTTTTGTCCT
TTTTGGTATCCTAATTTATTTTACAGGCTTCACATAAAGTCTTCTGATTT
GGCCAATGAGCCATTCCATTTTATATCCGTACATGGGGAGGGTAGACAAA
CATTTCCAGGGGGTAATTCGAGAAGGTTTTTGAGGTGCTCTAAAGAGTTT
TTTCTTTACTTTTCCAGAGGGTACAAAACATTTATTCTAAAATTTCAATT
CGTCGTCCAAAATCCATCACAAATCTCAATATTTTCTGTGCATAACAGTT
TAACTTTCTCTGAAATTCACCTGTGAGGACAAACTATAAGAAATTTATTG
CGAATCTCTCAATTACATTACTAATTCAAAAAAAACGAACATGGAGGTGG
ATGGAATTTAATCGATTCTTAACTGTATAAAGAATTTGTATGGTATGTGT
TTTACGCTTTCTTTCACTTAATCTTCTCTACCTTTCTTACTTATAATTTG
AGTGGTATAACCCTCATTCAAGATCCTGGATGGTTCCCATGGTAATTTCT
GAATGAATCTATTGTAGGCTGTAAGCAACCCCTCCGATATGTTTTGATCT
ATTGGATGCTAATCGTGTATAAAATTTCCGTCCAAGAGTTACCCCAAACT
TGGGGTAACCTGTTTCAATTTTCTTAAAAAGGTTAAGAAACCCAATGCCA
ATGCCCGGGGGGGGGCACTCGATTTCGAAACGACGGATTATGCCGCGTAA
AATCTGCTTTTGAAAATCGTACCCTTACAGTGCAGTTAAATATGACTGAA
AAGGTACCCTTTCAGTGCATTTTGTCTTCATTTACCCAACCCTTATAGTG
CACTATATTTCTCAGCTGTAAATCTGCGTGAAAGAAGAAGCTTGGGAAAT
TTTCTGTTTCAAAGAAAAACTGAGAAAATTATTCTTGTCAGCTGTAATTA
TCAGACAATAGAAACTTTTTCAAACAAACGCCCGAGAAGTAAAAACCTTT
ATTTTTAACAATTATTTTGAATTTGTTTTAAAATTCGACCCTTGCAGTGA
TATCTCACAGAAACACACCCTTACAGTGCATTTTGGGATGCTGAAAAACC
CCACCCTTAAGCGCGGCACATGACGTAGGCCAGATCATACGAGTGCCCCC
TGGGATCCAATGATCATATCAATCTCTAACCATTCAAACTTTAATTTATT
TCAAATTTAATGAAATCAAAAGATCTCTCATATAAAACTTACTAATCAAG
TTTCTAAAACTCAAAAACACAAAAACGGGGATAGCTCTCGGACGGGAATA
GTATACACGTTCCGCGTCCCCTTTATCAAAACATATCAGAGGCGATACAT
GCAGCTTTGATCTGTCGTCACAATGTAATGTTCATACAATGGGATACTTA
CTGTACTAAAATCAAGCTAGACGATATTATCGTCTGTCGCAGAGATAGTA
TACGCTTCGGTTGATTTTTCCCTTTTACCCTGACACTTACACTCATAATA
GCCAATTGTTTGAAGCTAAAACCCTTATTGTCTAAATCTCATTACCCCGG
GTCTTTTATCGCCTTCATAATGGGAGACGTGAATCGAAAGATGGGCTCCT
TTGATTCCTCAGTAAAAATCTTTCTCGCCCCTCTCCACCTGTCTTATTAT
GGTTTCAAGTAACCCTTATAAGTGGAAAAACATGTTGGAACAATTCTACC
CCAAAATTTACCATGGGAGAATTTTGAAGAAACGCTAACTCTACACCAGT
AAACTCGCTTCAACAGCAGAACTCATTCCTGGATTTTCCTCCGGAACTTA
TTCCTTAGATAGTTAGTCTTAGACAAAAGATGAAATCAAGCCATCTGACC
AAGCGGTATCAATTATTCCCTCTAGCGGCTCGGTTCTGTAAGTCACGTGG
AGATTGTCGCACAAACTTACGTCACCATCAAAGACGTTAGTAGTTTTAAA
GTGATTTCGTGATTCGATTAGACGTTAAAGAAGAAAGAAAGAATATTAAA
ATAAAATATTTGGAATCAATAGTAACAGCTTATTCAGGTGTGTAAATCTC
TCATGTTTGGACTATCGCAAGCCATTCCATCCATACGAAGGAGAAAATAT
TTTCCTTTAAAGGATGTGCGACGGTAGAAGCCCTGGTAGATCTCCTCCAT
ATTTAAAAAATGACATCAAAGTGAAATATCATGTTACTTCAGTTCAAATC
TTATTCACCATCGCGTTTTCTACCAGTCAAAGATGGCAACATCTTTAACA
TTTCTACTTTGCGCTTTAATAGCTTTAAGTTATTTACAACAAGCTGATGG
TTTAAGCTCGGAAGAAGAGCTTTGCAAATGGCAATACCCTGACAGTGAAG
TACAAAAATATGTTTGTATGGGAATCAGAGGTTTGGCGTCGCATACACCA
TTTGACCAAGTAGTGCTTTTCGCAATGGACTACTATTATGGCATCGATCC
TACACCTTTTGATATCATAAAAGACCAAGTGGAACGTCTTATTGATACCA
AGATGGAGGAATACACAGTCAAACAAATGAAACGGTGGCATAGATCCATG
TCAGCTCGTGTCCAGTCCTGTAGACGGAAGATCGATAAGAATATTCAATT
GTTCTGCTACAAGAATTTGTTAGAAGATTTATCAGGATACGAAGCTCAGT
TCAGAGGTCAAAACACCAACGAGGTTGCAATGTCTATCAAATATTATGAT
GTCTATGTCACCACTTATCTGTCAGTGTCCTACATGTTACGTAACATCTC
TGGACCAGCACAACAAGGAAGTATTGACCGAGATCTCAAATTCAAAGCTG
GTATTTTTGCTCGGTATTTGGAAAGAGCCGTGGACATCACTAAAGGATAT
ACCTGTCGTTACATCAAAGTCAAGCTTGTAGAAGATTACATCTTTGTGAA
AACAGAACGCTTGGTTTGGCCTGATGATCGAGAGATTTACAAATACATGA
ATTCCAGCCTTGATTTTGTGGATATCCGTGAAGAATTACTGTCAAACAAG
AGCAAGTGTGGCTTTTTCGACCATCGCAACAAATACATATCCACTGTTAT
CGATGTCCGTGATAACACAGTGTATCCTGGTGGTGATTTCTCGGACAGAT
ATTGTCGCACAGATCTCGCAATACCTGGATTGGTCCCACTCTCCTTTGTC
TACTGGCGCGTTTTCATGAAGAAATGTGGAGCGGCCGACGACAAGGAATG
GATTCGAAGGATTGGAAATCGCGTACAAGTCCTC Coding sequence (CDS) from alignment at sc0000304_pilon:33027..37760- >XLOC_024975 ID=XLOC_024975|Name=XLOC_024975|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1060bp|location=Sequence derived from alignment at sc0000304_pilon:33027..37760- (Clytia hemisphaerica_ch_hm2_pilon)
ACCAAAGGATATAGCTGCCGTTATATCAAAGTCAAATTAGAAGAAAGTTA
CGTGTTGTGGAAAGAAGATCGTTTAGTTTGGCCTAAAGATGAAGATATCC
CGAAATATCTGGATTCAAGAATCGAAGACGTCCGAAAGGAACTGACAAAC
AGTTCTCACAAATGCCGTTACTACGACACAACCAATTCATACATCTCCAA
AACCAAAGGATATAGCTGCCGTTATATCAAAGTCAAATTAGAAGAAAGTT
ACGTGTTGTGGAAAGAAGATCGTTTAGTTTGGCCTAAAGATGAAGATATC
CCGAAATATCTGGATTCAAGAATCGAAGACGTCCGAAAGGAACTGACAAA
CAGTTCTCACAAATGCCGTTACTACGACACAACCAATTCATACATCTCCA
AAAACGCTTGGTTTGGCCTGATGATCGAGAGATTTACAAATACATGAATT
CCAGCCTTGATTTTGTGGATATCCGTGAAGAATTACTGTCAAACAAGAGC
AAGTGTGGCTTTTTCGACCATCGCAACAAATACATATCCACTGTTATCGA
TGTCCGTGATAACACAGTGTATCCTGGTGGTGATTTCTCGGACAGATATT
GTCGCACAGATCTCGCAATACCTGGATTGGTCCCACTCTCCTTTGTCTAC
TGGCGCGTTTTCATGAAGAAATGTGGAGCGGCCGACGACAAGGAATGGAT
TCGAAGGATTGGAAATCGCGTACAAGTCCTCAACGCTTGGTTTGGCCTGA
TGATCGAGAGATTTACAAATACATGAATTCCAGCCTTGATTTTGTGGATA
TCCGTGAAGAATTACTGTCAAACAAGAGCAAGTGTGGCTTTTTCGACCAT
CGCAACAAATACATATCCACTGTTATCGATGTCCGTGATAACACAGTGTA
TCCTGGTGGTGATTTCTCGGACAGATATTGTCGCACAGATCTCGCAATAC
CTGGATTGGTCCCACTCTCCTTTGTCTACTGGCGCGTTTTCATGAAGAAA
TGTGGAGCGGCCGACGACAAGGAATGGATTCGAAGGATTGGAAATCGCGT
ACAAGTCCTC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000304_pilon | genome | sc0000304_pilon:33027..37760 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 310-540:232 |
| Aaloc | 223-306:316 |
| Aaloc | 214-222:330 |
| Aaloc | 160-213:4588 |
| Aaloc | 136-156:4609 |
| Aaloc | 4-129:4735 |
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