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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000454_pilon:78618..82218- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_024958 ID=XLOC_024958|Name=XLOC_024958|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3601bp|location=Sequence derived from alignment at sc0000454_pilon:78618..82218- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCCCATCACCCTAACAAGGGTAATAAAAACCCCGGTCTTAAGTATTT
TAGTGATGTAGATCCAGAAAAGGTTTTTTACGATTTACGTGAGATTGGTC
ATGGCAGTTTTGGTGCTGTATTCTACGCACGGCATGTGCAGTCCAAAGAG
GCAGTCGCCATTAAGAAGATGTCCTACTCGGGAAAAAATACAAATGAAAA
GTGGGGTGATATTGTGAAAGAGGTTGAGTTCTTTATTGGACTTGACCATG
AACACTGTGTGAAATATCATGGTTGCTATTTGAAAGACCACACAGCATGG
GTAAGTTTTTGTTTTCCAGATTGATTTTTAAATGAATTTTATTTTTTTGT
TACAAAATCTACCCATCATTTATAATGGTCCGTTGACTGAGATATGCATT
TATTTCATGTTCGAATTTGTTAGGCTAGCAAATGACAAATCAACTTAGCT
GGATTTTAAGGTGAATTAGATTGATTAGTGAAATACTTAGATTGGTGAAT
CAAAAATTTATTACTTCAGAGTTTGTCGGGCCAAAATAAGACTCCTGTTT
TCATTTCAAGCATAAAATCAATTAAATCCGCTCATTTGTTTTCAGCTTGT
GATGGAATATTGTGTTGGTTCAGCCTCTGATATTCTTGAAGGTAAACAAC
AGATTGGTTATGTATCTGTTATGATAAGTCTTTCACTTCTTTTTCTTGAC
CAACTTTTTGGATTAATTTTGTTTTACATTTTTCTGTAAGATATAAATGA
AAAAGGCCTCAAAACTTTTCAAAACAAAATTTATCTTTTTTTAGTACACA
AGAAGCCATTGCAAGAAAATGAGTGTGCGGCAATTTCTCACGGTGCTTTA
AGTGGGCTAGCATTCCTACATCAAAATAATAGGATACACAGAGATATCAA
AGGTGAATTTTTTTCCTCTTTCCTTTCAGGTGTCAAGGTTAGACTAAAGG
TTTTAATAAATTGTGTTAACAATTTTATATAAAAATTAGTATAGGCTAAA
ATTAATTCTCTTTAGCTGGAAGTCTACTTGGAAAAATAAGTTTATCACAA
ATTTGTTTATCACAAATTTGTTTGTCACAAAAAATCCCAGACATTTGAAG
ATGCTAAATCTTAATTTGTAGCTGCCAGCATAAATTTAACTTGGAATAAG
TAAAGTGTGCAGTTTCATAATATCTTTGTGCTATTTGGGTTTATAAATTA
TAGTTTTACCCAGAACTTCTATTCCTATATGAAGAATATAAAAAATAATT
ATACATTACGTTTCAGCTGGCAACATTTTGTTATCAGAAAAAGGCATTGT
GAAGCTTGGTAAGTTTTTTTTGGTTGTGTTTTTGTGACATTGGTTTACGG
TAATACTCTTGGTAGAAATAACTTTTATACTGTACATTATAATTAAAAAA
CCTTGGATTTTACAGTTTTCTGAAAAGCCTTCAATTACTGTTAAATACTA
AAGTATTCTTACTTCATTTTTTAGCTGATTTTGGATCTGCATCGATGAAA
TCACCAGCAAATTCTTTTGTTGGGACACCTTATTGGTAATTTTTTTAAAT
CTTAAGTTCCAAAGCCAATAATACTACAGAACAGTTTATCAAACCCCTAA
ATTTCTTTCTTATGTCAATGAATAAGGATGTCTGTTACAGCAGCCATATA
ACTGATTGAAGAAAAATTGCCTTGCCTTGCTTGTTCTGTTTTAGTGCTGA
AACTAATATAAAAACCCAGTTAAACCTTTGTATCCTGGCAACTCAAATTA
TTGATTTATTTTTTTTAGGATGTCACCTGAGGTAATCTTAGCCATGGATG
AAGGACAGTATGATGGCAAAGTTGATATCTGGTCTCTTGGAATTACTTGT
ATTGAACTAGGTGAGCTACTCATTTTTCTCGTATTTTTTTTTTCTTATCA
AAGTTTTTATTGTCTGTTTGCCGAAGATGCCAAAAAAGTGGGTTTGGGTA
TTTTATTTCTCTGGTCTCGACTTGAAAACTGACCAGGTTTTGACTTGATT
TAAGAAACTCCTGAACAGAGAACATTAATTTTCTTTCACGTACAGCTGAA
CGAAAACCACCACTGTTCAACATGAATGCAATGAGTGCACTCTACCACAT
TGCTCAAAATGACCCTCCACAGCTCAATATGGATAACGCAAACTGGTAGG
CCTCTGCTAATTACCTCTCGTAATTGTATGACACTTACTTACTGCTTACT
CTAACCACGCTAAAAAGAAATGAGCCTTTAACCCTTGTACTTGTCCTTAT
ATTGATTTAAATCTTATTTGAATTAAAAAAATAAATGTCAAGAAAAAAAG
ATTTTTGATTTAATTTTTATATTTTGTGCTGCTTAAAAGTTTGAAAAATT
TATAAGAAATTAAATGAAATGTTGTTGTTTTTCGCAGGTCAACGGAGTTT
AGTGTATTCATTGCTAAATGTCTTTCCAAACAACCTGGAGGCCGACCATG
CGCTGACGAACTACTGAAAGTAAGATTTTGCACTTTGCAGAAGTCGAAGT
TAGGACCATCTACATTTAATTATATTGGTACTTCGAACACTATCGATGGT
TTTATTCCTATTCTTAACCCAAACACATTGTTTTCAAGTAAAGTAACAGA
TGATTCCACTAAAAATTAGCTTAAAAGATTTTTAAGCTTGTTCTGTTTCA
GTGTTTGAATAAATATAAAAATCCAATTAAACTTTTAGTATCTTGATAGC
TCAAATTATTTTCATGCATTTTTTTCTCAGGAACCGTTCATAACGAGACG
TCGTCCACCAAACACCATCCTTGATCTAATAGACAGGACGAAAAATCAAG
TCAGGGAGTTAGACACGGATAATTACAACCGTATCACTAGAATTATCATG
AACGAAGAAGTTGACGGGGCGGAGAGTACCCCGCCCTCGTCACAACAATC
AACGCCACAAAGTAGGAATGGTGCCGCCATGGTGGAAAATGTGGAGGACC
GAATAGAATCATTGAGCTTGAACAGTCGATCGAGTAGTATCAGTGAAGAT
TCGAATGGCGAAACAGGTCAGATCATTGTCCAAGAAAGGGTCAACGATGG
ACCTTTCATACTGACGCAAGTAAGTAGGACATAGAGAATGTTCTTTTTAC
TGTTGTTATTAGGTAATTAAGTTTTTGAATCGACAAAATTTTACACATTG
CCTAAGGCTAAAAAGTCAACATTTTATTTAAAATAATTCAGCACAGCCAA
TAATGCATCAAAAGTATTCACATAATTTTATGGTATACCCCATCATTATT
GTGTTAAGATTAAACTACCTTACTACCTGAAAGACAATTAACTCATTACA
TTATACATATATCCACCCTTTTAAAGCGTGAGAAGGAGACGGGGTTATAG
TTTACCAGAAAGATTGGCTTCAAATGTCTATATCCTCCTCGAAGAATTAA
TAACATGACGTTGATAGGGTGTATTGCAATGTCTCATCGTCATAGAATGA
AATCAATCTGATATATTTCGACTTTTAGCCTACTACAGAGGAGGTAGAGG
ATCGTTTTGCGACGTTACGTCCAGCGCAATTTGTTCGCCGACAAATGCAA
GAACACAAGTCTGATGCTTACAGGGAACAACTCCAAGTTTATAAGAGGTA
A Coding sequence (CDS) from alignment at sc0000454_pilon:78618..82218- >XLOC_024958 ID=XLOC_024958|Name=XLOC_024958|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2586bp|location=Sequence derived from alignment at sc0000454_pilon:78618..82218- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCCCATCACCCTAACAAGGGTAATAAAAACCCCGGTCTTAAGTATTT
TAGTGATGTAGATCCAGAAAAGGTTTTTTACGATTTACGTGAGATTGGTC
ATGGCAGTTTTGGTGCTGTATTCTACGCACGGCATGTGCAGTCCAAAGAG
GCAGTCGCCATTAAGAAGATGTCCTACTCGGGAAAAAATACAAATGAAAA
GTGGGGTGATATTGTGAAAGAGGTTGAGTTCTTTATTGGACTTGACCATG
AACACTGTGTGAAATATCATGGTTGCTATTTGAAAGACCACACAGCATGG
ATGCCCCATCACCCTAACAAGGGTAATAAAAACCCCGGTCTTAAGTATTT
TAGTGATGTAGATCCAGAAAAGGTTTTTTACGATTTACGTGAGATTGGTC
ATGGCAGTTTTGGTGCTGTATTCTACGCACGGCATGTGCAGTCCAAAGAG
GCAGTCGCCATTAAGAAGATGTCCTACTCGGGAAAAAATACAAATGAAAA
GTGGGGTGATATTGTGAAAGAGGTTGAGTTCTTTATTGGACTTGACCATG
AACACTGTGTGAAATATCATGGTTGCTATTTGAAAGACCACACAGCATGG
CTTGTGATGGAATATTGTGTTGGTTCAGCCTCTGATATTCTTGAAGCTTG
TGATGGAATATTGTGTTGGTTCAGCCTCTGATATTCTTGAAGTACACAAG
AAGCCATTGCAAGAAAATGAGTGTGCGGCAATTTCTCACGGTGCTTTAAG
TGGGCTAGCATTCCTACATCAAAATAATAGGATACACAGAGATATCAAAG
TACACAAGAAGCCATTGCAAGAAAATGAGTGTGCGGCAATTTCTCACGGT
GCTTTAAGTGGGCTAGCATTCCTACATCAAAATAATAGGATACACAGAGA
TATCAAAGCTGGCAACATTTTGTTATCAGAAAAAGGCATTGTGAAGCTTG
CTGGCAACATTTTGTTATCAGAAAAAGGCATTGTGAAGCTTGCTGATTTT
GGATCTGCATCGATGAAATCACCAGCAAATTCTTTTGTTGGGACACCTTA
TTGCTGATTTTGGATCTGCATCGATGAAATCACCAGCAAATTCTTTTGTT
GGGACACCTTATTGGATGTCACCTGAGGTAATCTTAGCCATGGATGAAGG
ACAGTATGATGGCAAAGTTGATATCTGGTCTCTTGGAATTACTTGTATTG
AACTAGGATGTCACCTGAGGTAATCTTAGCCATGGATGAAGGACAGTATG
ATGGCAAAGTTGATATCTGGTCTCTTGGAATTACTTGTATTGAACTAGCT
GAACGAAAACCACCACTGTTCAACATGAATGCAATGAGTGCACTCTACCA
CATTGCTCAAAATGACCCTCCACAGCTCAATATGGATAACGCAAACTGCT
GAACGAAAACCACCACTGTTCAACATGAATGCAATGAGTGCACTCTACCA
CATTGCTCAAAATGACCCTCCACAGCTCAATATGGATAACGCAAACTGGT
CAACGGAGTTTAGTGTATTCATTGCTAAATGTCTTTCCAAACAACCTGGA
GGCCGACCATGCGCTGACGAACTACTGAAAGTCAACGGAGTTTAGTGTAT
TCATTGCTAAATGTCTTTCCAAACAACCTGGAGGCCGACCATGCGCTGAC
GAACTACTGAAAGAACCGTTCATAACGAGACGTCGTCCACCAAACACCAT
CCTTGATCTAATAGACAGGACGAAAAATCAAGTCAGGGAGTTAGACACGG
ATAATTACAACCGTATCACTAGAATTATCATGAACGAAGAAGTTGACGGG
GCGGAGAGTACCCCGCCCTCGTCACAACAATCAACGCCACAAAGTAGGAA
TGGTGCCGCCATGGTGGAAAATGTGGAGGACCGAATAGAATCATTGAGCT
TGAACAGTCGATCGAGTAGTATCAGTGAAGATTCGAATGGCGAAACAGGT
CAGATCATTGTCCAAGAAAGGGTCAACGATGGACCTTTCATACTGACGCA
AGAACCGTTCATAACGAGACGTCGTCCACCAAACACCATCCTTGATCTAA
TAGACAGGACGAAAAATCAAGTCAGGGAGTTAGACACGGATAATTACAAC
CGTATCACTAGAATTATCATGAACGAAGAAGTTGACGGGGCGGAGAGTAC
CCCGCCCTCGTCACAACAATCAACGCCACAAAGTAGGAATGGTGCCGCCA
TGGTGGAAAATGTGGAGGACCGAATAGAATCATTGAGCTTGAACAGTCGA
TCGAGTAGTATCAGTGAAGATTCGAATGGCGAAACAGGTCAGATCATTGT
CCAAGAAAGGGTCAACGATGGACCTTTCATACTGACGCAACCTACTACAG
AGGAGGTAGAGGATCGTTTTGCGACGTTACGTCCAGCGCAATTTGTTCGC
CGACAAATGCAAGAACACAAGTCTGATGCTTACAGGGAACAACTCCAAGT
TTATAAGAGGTAACCTACTACAGAGGAGGTAGAGGATCGTTTTGCGACGT
TACGTCCAGCGCAATTTGTTCGCCGACAAATGCAAGAACACAAGTCTGAT
GCTTACAGGGAACAACTCCAAGTTTATAAGAGGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000454_pilon | genome | sc0000454_pilon:78618..82218 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1171-1293:124 |
| Aaloc | 832-1170:872 |
| Aaloc | 751-831:1214 |
| Aaloc | 652-747:1555 |
| Aaloc | 559-648:1833 |
| Aaloc | 499-555:2126 |
| Aaloc | 457-495:2334 |
| Aaloc | 349-453:2806 |
| Aaloc | 301-345:3007 |
| Aaloc | 1-300:3602 |
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