|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000360_pilon:254154..256938+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_024954 ID=XLOC_024954|Name=XLOC_024954|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2785bp|location=Sequence derived from alignment at sc0000360_pilon:254154..256938+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGGATGTCCATGAATGGAGCTGGAAAAAGTCTGCCAAAGTCAACAG
TCTCTTTAAATCAAGGCAACCGTATACAAAGAAGGACGGTCAATCAACAA
GCGAACAGTCTGCGAAACGAAAAGGGAAACGCTGCCCCATGGAAGGATGC
TTTTTCGTCGGTATTCAGGTGGGGAGACACCTCCGTAAGGAACACTGTAT
GAAATTTGATGATGAAAATTATAAGGATGCACTCAAGGCAGCCCGTGTCC
ATGAGCCTTTGACGTCCGAAAACATCCAAAAGAATCGCCGGGCTGTTGCC
AGAGAGTTTGAACTTGCTGAGAACATCCAGGAATATGAAAAAGAAGTTGA
GAGTGGTACCGGAAGGAGGTCTGAAGAGAAAGTTATTGATTATGCAATGA
TTATGTTCGAAAGGTACTTGATTTCGGTTGAAGGAAATTTCCGTGATAAG
AGATCAGCTAAACAATGCGTCCAAGAAGTGAAAACGGTTGCTCTCCATCT
TGGATCTCTTGTTGCCCTATTCGACAAAAAGAAGGTCAGAGATGGGTTCT
TCCAATCGTACTTAGACCCAAAGTCCAAACCAAGCACATCGAAACACTAC
CTAACGTCATTGATTTCGTTCATGGGCTTCGTTATCACTGAAGGTCTCGA
GAGTCTCGCAGACATCGTAAATCAAGACGACGTGGTTGCCATGAAACTTA
GACTTGGTAATTGGAGGAAGGCTTATGGGAAAAAGCAAGATGTTTTACGT
TGGGAGAGGGACGACGAAATCAACGAAGTTCTTGTGACACTCGATCAGat
taaaacttttgaagaaagcGAACAAGCTATCAACGCAATCACGATCTTGG
AACAAGAGACTGATCTTCTTCCCTCAAGAAATGAATTTCTAACCGTCCGT
GACTATCTCTTTGCAAGAATTGCTTTGGCTAATGCCCACCGGTAAgcaca
tttttcattttaagatgTCATTTTGGCGGTATCAGGATGTTTTGACCAAA
ACCTGCCCTCGGACAATGAAATGTTCTCGTATGCCTTATATGTACGGCGC
CGTCTGGTGATTTTTACTTCTTTCCAACCCCGTCGATTTTATCATAACCT
CCATTTGTTcattttggaaataattttaGCTGTTAAATAAAAGTTCCCTG
TTTTCACAGGTTTTAATATTCATCTTATTTTATTGTGGATAGAGGTTTTC
CATATTTTGTTAAATATGTAGCATctgtcattatgaaaacaaacgTTCGA
TTTTTGTAAAGGATCGTATTGACAGATTCGAAGGTTTGTCTTCATAATGG
CGGAATATACGTAATTTAACAAAACGAAATGAATCAACTGAAAAATCTTT
CAGAAGAATTGTTGCTAACCCCAAGCCACCTTGATATTTGATTTCGTTTT
AGAACTGGGGTATGCGCAAACATGACGATGAAGGAATACGAAAACGTACT
CACCAAGGACGATCACAAGGTGATAAAGGTTCGGAAACACAAAACGTTTT
ACAAGCATGGTTATGCTCATGTTGCGATTTCCAACGAACTGTTTCAGCTG
CTCAAGTTGTACGTTGACAAAGTTCGTCCCACATTCAGCCGTCCTGATTC
CGAAAACGTATTTATCAGCTGTACCGGGCGAGGCATGGAGTCTGGTGCCG
TCAGCCGGAGGATTGACAAACTATGGAGAGAGTCGGGTGTGTATGGGGAT
AATACACCACCCAAGAAAAACTTGGATGGTAACATCATCAGAAAATCAAT
GACATCAATGGTGCATGAAAATAACGACGAGGGAGAGAAACAAGCAGTGG
CTGATTTGCTTGCTCATCGCAAAACCACGGCTGAAAATATATACCGTCAA
AAGAAGATGGTTGATCAAGCCGTAAAGGCCGCGGGAATTATCGAGAGAGT
TTCCCACAAGAGGTAAATGCTTTCATTGGTCTCATAAGGAACTTTCACGT
TTGTGGATTCAGTGAAAACTTATTCTGTGAAAAACATTACAGTATTTGTA
GGtatttgaaatatctttctGGGATTTGCGAGGAAAACGCGTGAGATTgc
tgaaattaaatccacgtgaaatttttcaagattttttttttagatttttg
gctCCAAATAGTACGTTTAAACATAAGCTACATTTGTTTAGACGTACTAT
TTAGATGGTCCCGTTGGCAGCGTTGGGGTGGTTACCGAATCAGTCCAGTT
TGCTTATCTCtattttttaaccttagaaAAACTGATCAAGTGGACTTTGC
AACAACGTCAAAAACGAGTGAAGTTAAGCCACCATCTTCTCAAACGGAAG
AAGTTACGCCCCCGTCTTTTCAAACGAAAGAAATTACGCCCCCGTCTTCT
CAAACGGAAGAAGTTTCGCCCCCATCTTTTCAAACGAAAGAAATTACGCC
CCCATCTTTTCAAACGGaagaaattacaaagaaaacgaGTGAAGTTCCGC
CACCATCTTCTAAAACggaagaaattacaaaaaaggaTGACGTTGAAGAA
GACACTTATCCAGAAAAAGAAGTTAGCGAAATGAAACGTAGTCGAACCGT
TCCTTCCGGAAAAGGGAAAACGAAATCATTTTCTACTGAACAAACTGATT
TATTGTATAAGATCACGAAAAAGATATATTTGGAGAATCTATCCATTAAC
GATGAAACAGCCAGGGTTGTCCTTGAGGAATCATCCGAGGGGGAACAGTT
TCTGAAAGATTATACGCTATATACCCTCGTGAATAAGTTGAAATATGGAC
GAagactttataaaaataataaactgTCTTTTTAG Coding sequence (CDS) from alignment at sc0000360_pilon:254154..256938+ >XLOC_024954 ID=XLOC_024954|Name=XLOC_024954|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4020bp|location=Sequence derived from alignment at sc0000360_pilon:254154..256938+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGGATGTCCATGAATGGAGCTGGAAAAAGTCTGCCAAAGTCAACAG
TCTCTTTAAATCAAGGCAACCGTATACAAAGAAGGACGGTCAATCAACAA
GCGAACAGTCTGCGAAACGAAAAGGGAAACGCTGCCCCATGGAAGGATGC
TTTTTCGTCGGTATTCAGGTGGGGAGACACCTCCGTAAGGAACACTGTAT
GAAATTTGATGATGAAAATTATAAGGATGCACTCAAGGCAGCCCGTGTCC
ATGAGCCTTTGACGTCCGAAAACATCCAAAAGAATCGCCGGGCTGTTGCC
AGAGAGTTTGAACTTGCTGAGAACATCCAGGAATATGAAAAAGAAGTTGA
GAGTGGTACCGGAAGGAGGTCTGAAGAGAAAGTTATTGATTATGCAATGA
TTATGTTCGAAAGGTACTTGATTTCGGTTGAAGGAAATTTCCGTGATAAG
AGATCAGCTAAACAATGCGTCCAAGAAGTGAAAACGGTTGCTCTCCATCT
TGGATCTCTTGTTGCCCTATTCGACAAAAAGAAGGTCAGAGATGGGTTCT
TCCAATCGTACTTAGACCCAAAGTCCAAACCAAGCACATCGAAACACTAC
CTAACGTCATTGATTTCGTTCATGGGCTTCGTTATCACTGAAGGTCTCGA
GAGTCTCGCAGACATCGTAAATCAAGACGACGTGGTTGCCATGAAACTTA
GACTTGGTAATTGGAGGAAGGCTTATGGGAAAAAGCAAGATGTTTTACGT
TGGGAGAGGGACGACGAAATCAACGAAGTTCTTGTGACACTCGATCAGat
taaaacttttgaagaaagcGAACAAGCTATCAACGCAATCACGATCTTGG
AACAAGAGACTGATCTTCTTCCCTCAAGAAATGAATTTCTAACCGTCCGT
GACTATCTCTTTGCAAGAATTGCTTTGGCTAATGCCCACCGATGAGGGAT
GTCCATGAATGGAGCTGGAAAAAGTCTGCCAAAGTCAACAGTCTCTTTAA
ATCAAGGCAACCGTATACAAAGAAGGACGGTCAATCAACAAGCGAACAGT
CTGCGAAACGAAAAGGGAAACGCTGCCCCATGGAAGGATGCTTTTTCGTC
GGTATTCAGGTGGGGAGACACCTCCGTAAGGAACACTGTATGAAATTTGA
TGATGAAAATTATAAGGATGCACTCAAGGCAGCCCGTGTCCATGAGCCTT
TGACGTCCGAAAACATCCAAAAGAATCGCCGGGCTGTTGCCAGAGAGTTT
GAACTTGCTGAGAACATCCAGGAATATGAAAAAGAAGTTGAGAGTGGTAC
CGGAAGGAGGTCTGAAGAGAAAGTTATTGATTATGCAATGATTATGTTCG
AAAGGTACTTGATTTCGGTTGAAGGAAATTTCCGTGATAAGAGATCAGCT
AAACAATGCGTCCAAGAAGTGAAAACGGTTGCTCTCCATCTTGGATCTCT
TGTTGCCCTATTCGACAAAAAGAAGGTCAGAGATGGGTTCTTCCAATCGT
ACTTAGACCCAAAGTCCAAACCAAGCACATCGAAACACTACCTAACGTCA
TTGATTTCGTTCATGGGCTTCGTTATCACTGAAGGTCTCGAGAGTCTCGC
AGACATCGTAAATCAAGACGACGTGGTTGCCATGAAACTTAGACTTGGTA
ATTGGAGGAAGGCTTATGGGAAAAAGCAAGATGTTTTACGTTGGGAGAGG
GACGACGAAATCAACGAAGTTCTTGTGACACTCGATCAGattaaaacttt
tgaagaaagcGAACAAGCTATCAACGCAATCACGATCTTGGAACAAGAGA
CTGATCTTCTTCCCTCAAGAAATGAATTTCTAACCGTCCGTGACTATCTC
TTTGCAAGAATTGCTTTGGCTAATGCCCACCGAACTGGGGTATGCGCAAA
CATGACGATGAAGGAATACGAAAACGTACTCACCAAGGACGATCACAAGG
TGATAAAGGTTCGGAAACACAAAACGTTTTACAAGCATGGTTATGCTCAT
GTTGCGATTTCCAACGAACTGTTTCAGCTGCTCAAGTTGTACGTTGACAA
AGTTCGTCCCACATTCAGCCGTCCTGATTCCGAAAACGTATTTATCAGCT
GTACCGGGCGAGGCATGGAGTCTGGTGCCGTCAGCCGGAGGATTGACAAA
CTATGGAGAGAGTCGGGTGTGTATGGGGATAATACACCACCCAAGAAAAA
CTTGGATGGTAACATCATCAGAAAATCAATGACATCAATGGTGCATGAAA
ATAACGACGAGGGAGAGAAACAAGCAGTGGCTGATTTGCTTGCTCATCGC
AAAACCACGGCTGAAAATATATACCGTCAAAAGAAGATGGTTGATCAAGC
CGTAAAGGCCGCGGGAATTATCGAGAGAGTTTCCCACAAGAGAACTGGGG
TATGCGCAAACATGACGATGAAGGAATACGAAAACGTACTCACCAAGGAC
GATCACAAGGTGATAAAGGTTCGGAAACACAAAACGTTTTACAAGCATGG
TTATGCTCATGTTGCGATTTCCAACGAACTGTTTCAGCTGCTCAAGTTGT
ACGTTGACAAAGTTCGTCCCACATTCAGCCGTCCTGATTCCGAAAACGTA
TTTATCAGCTGTACCGGGCGAGGCATGGAGTCTGGTGCCGTCAGCCGGAG
GATTGACAAACTATGGAGAGAGTCGGGTGTGTATGGGGATAATACACCAC
CCAAGAAAAACTTGGATGGTAACATCATCAGAAAATCAATGACATCAATG
GTGCATGAAAATAACGACGAGGGAGAGAAACAAGCAGTGGCTGATTTGCT
TGCTCATCGCAAAACCACGGCTGAAAATATATACCGTCAAAAGAAGATGG
TTGATCAAGCCGTAAAGGCCGCGGGAATTATCGAGAGAGTTTCCCACAAG
AGaaAAACTGATCAAGTGGACTTTGCAACAACGTCAAAAACGAGTGAAGT
TAAGCCACCATCTTCTCAAACGGAAGAAGTTACGCCCCCGTCTTTTCAAA
CGAAAGAAATTACGCCCCCGTCTTCTCAAACGGAAGAAGTTTCGCCCCCA
TCTTTTCAAACGAAAGAAATTACGCCCCCATCTTTTCAAACGGaagaaat
tacaaagaaaacgaGTGAAGTTCCGCCACCATCTTCTAAAACggaagaaa
ttacaaaaaaggaTGACGTTGAAGAAGACACTTATCCAGAAAAAGAAGTT
AGCGAAATGAAACGTAGTCGAACCGTTCCTTCCGGAAAAGGGAAAACGAA
ATCATTTTCTACTGAACAAACTGATTTATTGTATAAGATCACGAAAAAGA
TATATTTGGAGAATCTATCCATTAACGATGAAACAGCCAGGGTTGTCCTT
GAGGAATCATCCGAGGGGGAACAGTTTCTGAAAGATTATACGCTATATAC
CCTCGTGAATAAGTTGAAATATGGACGAagactttataaaaataataaac
tgTCTTTTTAGaaAAACTGATCAAGTGGACTTTGCAACAACGTCAAAAAC
GAGTGAAGTTAAGCCACCATCTTCTCAAACGGAAGAAGTTACGCCCCCGT
CTTTTCAAACGAAAGAAATTACGCCCCCGTCTTCTCAAACGGAAGAAGTT
TCGCCCCCATCTTTTCAAACGAAAGAAATTACGCCCCCATCTTTTCAAAC
GGaagaaattacaaagaaaacgaGTGAAGTTCCGCCACCATCTTCTAAAA
CggaagaaattacaaaaaaggaTGACGTTGAAGAAGACACTTATCCAGAA
AAAGAAGTTAGCGAAATGAAACGTAGTCGAACCGTTCCTTCCGGAAAAGG
GAAAACGAAATCATTTTCTACTGAACAAACTGATTTATTGTATAAGATCA
CGAAAAAGATATATTTGGAGAATCTATCCATTAACGATGAAACAGCCAGG
GTTGTCCTTGAGGAATCATCCGAGGGGGAACAGTTTCTGAAAGATTATAC
GCTATATACCCTCGTGAATAAGTTGAAATATGGACGAagactttataaaa
ataataaactgTCTTTTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000360_pilon | genome | sc0000360_pilon:254154..256938 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1453-2010:2228 |
| Aaloc | 943-1449:1404 |
| Aaloc | 1-939:1 |
|
