XLOC_024882 (mRNA) -

Overview
NameXLOC_024882
Unique NameXLOC_024882
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000067_pilon:1156404..1157326-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024882 ID=XLOC_024882|Name=XLOC_024882|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=923bp|location=Sequence derived from alignment at sc0000067_pilon:1156404..1157326- (Clytia hemisphaerica_ch_hm2_pilon)
TTTGACGACAAAAGTGAAGAATTGTTCAAAAGGAAAGAGTTGCACCATTT CAGGTAAGAAATCGTTTTATACCTTAAAGGAAGAAATTTTGGCGGGAATT TAATTTGGCGGATGGCCGAAAAGGTTTTTTCAGAGGGAATTTAATTTGGC AGATAGCTGGATAAAGTAAATTTGACGGGAATTTAATTTGGCGGTTGCAG GATATTTTTGGCCAAAAGCGTTATTAAATAAGCAAAAAAACCTTTTTAAA GGCTTGAAATAGCACAAATTTGGGGAATGCGTGAAATAAATTAAATTTTG CGGGAATTTAATCTGGCGGACGGAGGAAAAAATAAATTTTGGCGGTAACT TAATTTGGCGGATTTTGGCGAAATCTGCCGAATCCGCCAAATTTTCTTTC CACCAAAATTTCTTCCTTTAAGGTAGTTAAAACTCAAATTAAGTACACGG GAGATCTTTTTAATTGTCCTCTCTGATTAACATCTTTGCTCTTTGCGATA CCAGCACCCTTTCAAACTTTTCGCATATTTTTAGGAAATATACGCTTCGA GAGGAGAGACTTTACCTCGAAGATTGCTGGCAAAAGCTTGTAAACATCTT CCCAGAAAGGATACCAGCGTTTGTTATCATAGATGAGGATGGAAACAGGA CTCTTTTGAGTAATTTGACAAGACCTAATCCCCATTTGCACGATAACGTA AGTGATTTTTAAGAGTTTAAAGATAATTTATTTTCTTTTTTCCAACTGAA AGTTCAACTGTCAAATTTATTTAAGAGATTGACAAAACTATTAGCGCTGT CGTTTTGATTTTTTTTAGGTCCCCCTTACTTCAACACCAGCAAAAAATAG ACCCAGTGCAGAGCACGAAGAAGAAATCGACATGGTGATTGAACACTCTG TTATCAATGGAACTACCAATGAA

Coding sequence (CDS) from alignment at sc0000067_pilon:1156404..1157326-

>XLOC_024882 ID=XLOC_024882|Name=XLOC_024882|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=642bp|location=Sequence derived from alignment at sc0000067_pilon:1156404..1157326- (Clytia hemisphaerica_ch_hm2_pilon)
TTTGACGACAAAAGTGAAGAATTGTTCAAAAGGAAAGAGTTGCACCATTT
CAGTTTGACGACAAAAGTGAAGAATTGTTCAAAAGGAAAGAGTTGCACCA
TTTCAGGAAATATACGCTTCGAGAGGAGAGACTTTACCTCGAAGATTGCT
GGCAAAAGCTTGTAAACATCTTCCCAGAAAGGATACCAGCGTTTGTTATC
ATAGATGAGGATGGAAACAGGACTCTTTTGAGTAATTTGACAAGACCTAA
TCCCCATTTGCACGATAACGAAATATACGCTTCGAGAGGAGAGACTTTAC
CTCGAAGATTGCTGGCAAAAGCTTGTAAACATCTTCCCAGAAAGGATACC
AGCGTTTGTTATCATAGATGAGGATGGAAACAGGACTCTTTTGAGTAATT
TGACAAGACCTAATCCCCATTTGCACGATAACGTCCCCCTTACTTCAACA
CCAGCAAAAAATAGACCCAGTGCAGAGCACGAAGAAGAAATCGACATGGT
GATTGAACACTCTGTTATCAATGGAACTACCAATGAAGTCCCCCTTACTT
CAACACCAGCAAAAAATAGACCCAGTGCAGAGCACGAAGAAGAAATCGAC
ATGGTGATTGAACACTCTGTTATCAATGGAACTACCAATGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_024882XLOC_024882-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000067_pilongenomesc0000067_pilon:1156404..1157326 -
Properties
Property NameValue
Aaloc220-324:106
Aaloc58-219:389
Aaloc4-54:924