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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000067_pilon:952440..958005- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_024761 ID=XLOC_024761|Name=XLOC_024761|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5566bp|location=Sequence derived from alignment at sc0000067_pilon:952440..958005- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGTATTCACTCATTGCACTCACTGCATGTTCTAACAAAGCTTTCGGT
GTCTGTTCCAAGGTAGGTACTACGACATATGTTTTAGAAGGTTTAAAGGA
CTCAGTTACCGGGTATCTCAGGCGGTAGAGCATTTACCTTACGATCCAAG
CCTCGTGGGTTCAATCCTTGGTCATCTCCATTTCAACATAGTCATTATAA
AAAACCCCGGTCTGGAAGGCTTTTGTTGTTTCTTTCTATTATTAACCGTG
ATAGCTTGCGTACCTTAAATTGATTTGTTTTGCATACCTTTTGATCACAT
GGCTAGAAAATGAACCAATCCCAATATTATATCTATTCTTGGGCTATTTT
TACCATAATTGCCATCACGCTATTGCTACATTTGTCGCGTTTATTATCAG
CAGTTAATGACGTAGTTCACTCTGTAAGATTTGAAGGTTAAATAACTTTT
AAGGTTAAATCTTGCACGAGACACAGTTACTCGCTGATGTCCTGATTAGC
ACTAAGCTAAGGGACAAAAAATTCTTTAATCTTAATTTGGCCTCCACAAC
TCGAACCTCTATTACTCTCCTTAACAAGTTTGCTTGTCCCACTGTATTCC
GTTTTTCACGCTCACTTCCCTTTTCTCAAACCTTCCAGTTTTGTTTCTGA
CATCTAGTCAGTAGTTTTTTCAGTTATTTCATCATTTTATTTATGTCTTA
GACGATGCTATCGTCCGTTTATAGGGTCAGTAAACGCGGGAAAGTATATA
TGCGCAGAGTCAGGGTGTCAGGGCGGTTTACGGTAAAAATAGTGGCGGTA
GAGTTTTGGAACAAACACTGTAAACACCTCCGCCCACTGTTTACTCCGCC
CCGAACTGAATCCCGTTCTCGAATATATCCCGCATCCTGAATTATTCCAT
TTTAGTGATAATTTGTAGGTGTCTGTGTATGTTTCTTCTTTGAATTCGAA
AATCCAGCCTTGACTCACTCTTTGACGAGTCAATTTAAAGTTAGCAAAAC
AGAAAAATTCTTAGTTTCCTCAGACATGGCGTGAAACATTCTTCATAAGT
AAAGGATTTGTTAGGTGCATTGAGATTCCGTTTCATTGTGATACACCTTT
TAACCCTTTTTCATGTAGATGGGATCCCCTCACTATGAAAAAAGGGCCAA
GCTCAAGATTTAAGGTTAGCCAAACAGAAAAATTCTCAGTTTTCTCAGAC
ACAAATTTCATGATTGGCCCTTTTGTGATTTGTCAACGGCGATATAAGCT
TGGGTAGGAAAACGATATAATGCAAGTCTTCAATAAGTAATCTTTTTATA
TTGCAGTGATCAAAGGTACTTCAGAAAGATCTCAAAATCTTTTACTTTTG
AATTTTGATGTACCTTATTGGAACTAATTTTCGCGGGAACTTATTTTCGC
GGTCGAAAAAAAATATCCTGAAAATTGCATTTCGCGGGTTTTAATTTTCG
CGATTTTTTCCATTCTGGAATTTTCACGGGTTTTAATTTTCGCGGTTTTG
CCCTTTATATTTGATCGCCTGAAGATTTGTCACGCAAAAGTAACTTCGTG
AAACTATAAGAGAGAGTAGTAGAATAATTATCTTTATTATTGTCATAATT
AGTTGTCCTTTTTCTTCTACTGAACTAATTCTTAACCACTAAAGCTTTAT
ATAAAATTCTGCAGGCATTTTTTCAATCCAGGCCAACTGAAATTTTTGGA
ATATTAGAAACCCCAATGAACCCTTTCAAAAAAACTTCGATGACCTTTTT
AGCTTAGTCCTGGGTTTATAAAGGTCAGTATATATAACCATGAAGCTAAA
TTCACAATAAAACCAAGAAAATACATATAGCAAGAACTGTGGAAGTTTTC
CGGCAATGGAGATGGTGTTTTACAATGTGATCGGTGGGTTTTCTTTGTAT
AACGAAAAAGATGGAAAATGCTTCGATTGTTCTCTTAGAAGGTACCGTTT
TGAAAATTCCAAACCATTTAATGTCCAGTATCAGAGTGCAAAATTAGTGC
GATTTTGTGCTTTGGACTTTAGAAAAGAAGAAGAAAAACTCCCGTTAATT
CATGGAAATAATTATCCATCAGAAGGTGGGTGGGTTCTTCTGCATCGATT
AGTTGGATTGTAATATCGAATTTTTAGGTAGGACACCACAAGTGGCCGGA
TAGCTCACTCGGTAGAGCATTCACCATATAATCTAGGTGTTGTGGGTTCG
ATCCCCGGTCACCGCCAACTCAGCGGATGAGTAGCTTGATTGGGTAATCT
GATCTAGGTGGTAAGTTACTGGGAGCTGAGAGTAGGTGTGGCGCTCCACC
TCAGCATTCGATCTCCCAGGTCTAGCGCAAATAGAAAAGGGGACTCCCTC
ACTCCTGGCTCCGCCGACAGCCACCAGATGAATATACTTACTTAGTTACT
TACCACAAGATCAGATCTGGTGTTACGTTTGAAGTATGCGGATCCCTCTA
AAATATTAAGAGTGCTATGAAATTCATCTTTACATTGTTAAGTTCTTTGT
TATCTTCTTTTCTAATCAACAGTAGAAACCATTCCTGCCATAGATAGAGT
GGAAGAAATATCACGTGGATACTCTAGTAATTTAGGACTTTCAGGCAGTC
TTTTGATTGTTTTCATGTTGTCCACCGCCAACGTACTCGACTATCTATGA
ACTGAATAAGCCCCCCCTGCTTGTTAATATTCGAAAATGTTTTCAGCTGT
CAAAAGAAGAAACCCTTATTTTGCTCTAAAAGCCTAATTTTAATCTATAA
ATACATAAGGTATTTTGCGTACTAAGATTTTTTCCACCCCCACCCCTGTT
TATAAGGCACTTGGAGAGGATGTAGTTAAGAACAAAGAAAGTCCGCAAGC
GTGCCAATCTCGGAACATCAGCATTTCTTAAGAGAATATGGGAATGCGTT
TTGTAGCTAAGTGCAAGTTTTTTGATCTAACTATTACATACTAAAGCGAG
TGAAGGGATGCCAATAAGTACATGAATACCTTATAGGGATGTTTTTAGAA
ACCAAAAAGGAACGGAGTCTAGCATTGCGGAGGAGTGTGACTATCTCCAT
TAGTTTTTGCTTGGTGGACAAAGTGGCGCTTCACCGCAGACGCTCTTGAC
TTTTGACGTCATTAGGTCCACCACAAAACTGCATCCATTGCCATTTTGTT
AATTAATAAGAGAAGAAAATTAAATTCAAGTTAATGGTTCGTGATGTCGT
TGTAATATATTACTGCCCGTTTCAATTGTATTATAATTATAACAAGAGAA
ATATTATTTTTTTTGTTATTTTACTGCTGTTGTTGTTATTGAGAAAGTTT
TTATTTTGGATGTTTTTTTTCTACTGTCATTTTCCGGCAATATTCAGCTT
TTTTGGTTTTGGTATTACGTTTGTTTTAGATTTACTTTTGTGTTTGATTG
TTTTGATTTTTTGTTTTCTTTTTTCAAGTGCTGCTTGTTTTCGTTGGGAA
AATGCAATTTCCTAGAGATGTTTCTTTTGTTATGATATTTTGTGTAGTGT
TGTAGAACTATAAATGAGAAATAATTTGTCAACTTTCTGTCATTTTCAAT
GTGTTATGTTTTGTGAAATACACGGTTTTTTTTTATAAGGAACCTTAACT
TGGCTCCGAGCCTGGAGTTCCTTATTTTTTCAGAGAATTTCAGCCTCAAA
GTTTCTTATCACGAGTTCCTTATTACTTACCTTCAAAGTTTAGATTGATT
TGATGTTTTGTTAAACGATTGACTACAGTACAGATAAATCCTTTATTGAA
TATGTTTCATCATTATTTCATCAACTTTTTGTTTAGGTTTTTGTAAATTT
GTGCAAGTTTATGTTTAACTCTTACTGTTCTTTAACTTGTTTTCTTATTC
TCAGCCTAAGCAGTTCCTTAACAATTTCTTATTTTTCGGACCATTTTCAG
CCTCGAGTTCCTTATAAACGTGTTCCTTATATAAGAAAACGTGTAGTTCA
TAATAGTTCGGTCTCTTCGCTTAAAGTAATATGTAAATGTTGATATCTCT
AAATTAAGATAAGCTGCACTTTTGATACGGGAGTTAATTATAGGAGCTGA
ATGAGTCATATTATGGGTTTCCAAGTCATTCTGCGCTCTAACTTTCTTAC
TGCCTCTCACCAAAATCTTTGGTTTTTCAAAAGAGCATTCCTACGCAACG
CGCCTGTTTTTCGATGATTTTACTGTATGTAGTATTATAAAAGTTTGAAC
TAACGAGACGCAAAACTTCTCTAACCTTCAAAATAAAGCAACAATCGTCT
GTGGTAGGGGTGGGACATGCTACATATTAAGTAGTAACCATTGTCAAAAT
TAAATGATTCAAACTACTCTTATACTTAGGGTTGTTTAATGACGTTTTTT
CTCCAAGGAGATCTATCATAAAGCGTTGATCTTTTAAGGAATGAACATCC
TTTTATAGTAATTACAAGACATTCAATTACCCATCAAACCACACACAAGT
TTATGTTATGTTTCCATGTTGCGTATAGTATACAAACATAGTATTGTATG
AAAAATATTTCTTGTACAACGGAGTTTTTATAACTCGAACCCTCACGGGA
AACACAAATTGTTTCGAGTTATGGAGTAAGGTTTTTAAGGCATTGTTAAC
TGAAGGGACCATAAAACTTGTCCGAGTGAAGGAGACTTTCGAGTTATAGA
GGTTTTGAGTTATAGAGGTTCGAGTTATAGAGGTTCGAGTTAAAGAGACT
CCTTTTTATATCATTTTTTCTGTAAGCCCATACCACCAGTCAAGAATCGT
TCCCGTAGAGGCATATTTTTCACATCGACGCAAAACGACGCAAATATTTT
ACGGTGGATTGATTTTGGATTGGATTAAGTAATTTTGGCCTAGTGTGGTT
TTCCCGGGGATTTTATTTGGTGATCGAATGATTTTGTAAATTTTGGTGTG
GATCTACTTTGACTGTCTGGCAAAATCAGATTTTTAGGCGGGGATTTGAT
TTGCAGGACGGGGAAATTTGAGACTCTAAAAGGCATGGTAACTAGATACA
AAGAATCAGTTGGGATACCTTATGGCAAAGAAATCGTGACTTGTAAACTT
CCATATCAATCTGATTTAATGGACTCTATCATATCGTTTCGTTCATTTCT
TTTCCGAAAAAAAGTAAATATATTTCTTTGATTTTCTCATTTCAGAGTAC
CTTGTGATGAGAGTACGCACCCAGTCACCACAAGCGAAGTGAAACGACCA
AGTGTCAAACGTCATAAACTGGGAACTACTACCATCTCAAACCTCGCATC
AAAAACTTCTGAAGAATTAGGTATTTTCACAAAAAATCAATCTTTCATTT
GTATATTAAAGCTACAATCTAGAATATTGCTGACCAAATATAAAATCTAT
CACACTTTCCTTCATCAGCAAAGCATCCTGGAGGAATTGGTAAAGAACCT
TATATTTTTCATATATATTGGCAAGTATTATTTCATATATCTCTTTAGAT
TTAAGAAGCCCCCTGCCAATGGCCCTTTTTTTTTCGCAATTCACGCAATT
TCTGTTCACGCAAATTTTTCCAATTCACGCATTCACACAAGTGAAAAAGC
CCATTCACGCAAGTGA Coding sequence (CDS) from alignment at sc0000067_pilon:952440..958005- >XLOC_024761 ID=XLOC_024761|Name=XLOC_024761|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=966bp|location=Sequence derived from alignment at sc0000067_pilon:952440..958005- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGTATTCACTCATTGCACTCACTGCATGTTCTAACAAAGCTTTCGGT
GTCTGTTCCAAGATGCGTATTCACTCATTGCACTCACTGCATGTTCTAAC
AAAGCTTTCGGTGTCTGTTCCAAGAGTACCTTGTGATGAGAGTACGCACC
CAGTCACCACAAGCGAAGTGAAACGACCAAGTGTCAAACGTCATAAACTG
GGAACTACTACCATCTCAAACCTCGCATCAAAAACTTCTGAAGAATTAGG
TATTTTCACAAAAAATCAATCTTTCATTTGTATATTAAAGCTACAATCTA
GAATATTGCTGACCAAATATAAAATCTATCACACTTTCCTTCATCAGCAA
AGCATCCTGGAGGAATTGGTAAAGAACCTTATATTTTTCATATATATTGG
CAAGTATTATTTCATATATCTCTTTAGATTTAAGAAGCCCCCTGCCAATG
GCCCTTTTTTTTTCGCAATTCACGCAATTTCTGTTCACGCAAATTTTTCC
AATTCACGCATTCACACAAGTGAAAAAGCCCATTCACGCAAGTGAAGTAC
CTTGTGATGAGAGTACGCACCCAGTCACCACAAGCGAAGTGAAACGACCA
AGTGTCAAACGTCATAAACTGGGAACTACTACCATCTCAAACCTCGCATC
AAAAACTTCTGAAGAATTAGGTATTTTCACAAAAAATCAATCTTTCATTT
GTATATTAAAGCTACAATCTAGAATATTGCTGACCAAATATAAAATCTAT
CACACTTTCCTTCATCAGCAAAGCATCCTGGAGGAATTGGTAAAGAACCT
TATATTTTTCATATATATTGGCAAGTATTATTTCATATATCTCTTTAGAT
TTAAGAAGCCCCCTGCCAATGGCCCTTTTTTTTTCGCAATTCACGCAATT
TCTGTTCACGCAAATTTTTCCAATTCACGCATTCACACAAGTGAAAAAGC
CCATTCACGCAAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000067_pilon | genome | sc0000067_pilon:952440..958005 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 64-483:421 |
| Aaloc | 1-60:5567 |
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