XLOC_024640 (mRNA) -

Overview
NameXLOC_024640
Unique NameXLOC_024640
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000582_pilon:37177..38302+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024640 ID=XLOC_024640|Name=XLOC_024640|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1126bp|location=Sequence derived from alignment at sc0000582_pilon:37177..38302+ (Clytia hemisphaerica_ch_hm2_pilon)
caattttcaaagattgtcaAAAGCAAGCCATTTGATGGTAATTTGAGGAC CTTTTCTTCCCTTAAAACCAAAATTGTTGCTCCGTTGTCCGGCGAAATCG TTTCTCCGTCGTCGTCGTCCGGCGAAATCGTTGCTCCGCTGTCGTCGTCC GGCGAAATCGTTGCGCCACCGTCGTCCGACGAAATCGTTGCATCACcgtc gtcgtcgtccgacgaaatcgttgctccaccgtcgtcgtccgacgaaatcg ttgctccgtcGGCATCATCCGGCGAAATCGTCGTTTCGTCCTCGTCTggc aaaatcaacaaaatcgtTGTTCCGTCGGCATCATCCGTTTCGTCGTCGTC CggcaaaatcaacaaaatcgtTGTTCCGTCGGCATCATCTGGCGAAATCG TCGTCTCGTCGTCGTCCggcaaaatcaacaaaatcgtTGTTCCGTCGGCA TCATCCGTTTCGTCGTCCggcaaaatcaacaaaatcgtTGTTCCGTCGGC ACCATCCGTTTCGTCGTCCggcaaaatcaacaaaatcgtTGTTCCGTCGG CATCATCCGTTTCGTCGTCGTCCggcaaaatcaacaaaatcgtTGTTCCG TCGGCATCATCTGGCGAAATCGTCGTCTCGTCGTCGTCCggcaaaatcaa caaaatcgtTGTTCCGTCGGCATCATCCGTTTCGTCGTCGTCCggcaaaa tcaacaaaatcgtTGTTCCGTCGGCATTATCCGGCGAAATCGTCGTATCA TCGTCGTCCggcaaaatcaacaaaatcgtTGTTCCGTCGGCATCATCCGT TTCGTCGTCGTCCggcaaaatcaacaaaatcgtTGTTCCGTCGGCATTAT CCGGCGAAATTGGTGTTCCGCTGTCGTCTGGTTCCTCCACTGTTCCATGG TCTGGTTCCTCTAATGTTCTGTTGCCTGGTTTTGTTGTTCCTTTGTCTGC CAACACTCCAGTTTATTCAACGAACGCTTCAACCCCACGCCAACAATACA CCACACCAAGTAGTTGTTCCTCTCGCATGTATTTCACTCCGGAGTCAACG GATTATGTTGTTTCTTCAAGAAGTGGTGGTCGATTTCTTCAACAATCCAA AGATCAAAAAAGCACTCGTGAGAAGA

Coding sequence (CDS) from alignment at sc0000582_pilon:37177..38302+

>XLOC_024640 ID=XLOC_024640|Name=XLOC_024640|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1364bp|location=Sequence derived from alignment at sc0000582_pilon:37177..38302+ (Clytia hemisphaerica_ch_hm2_pilon)
caattttcaaagattgtcaAAAGCAAGCCATTTGATGGTAATTTGAGGAC
CTTTTCTTCCCTTAAAACCAAAATTGTTGCTCCGTTGTCCGGCcaatttt
caaagattgtcaAAAGCAAGCCATTTGATGGTAATTTGAGGACCTTTTCT
TCCCTTAAAACCAAAATTGTTGCTCCGTTGTCCGGCTCGTCGTCCGGCGA
AATCGTTGCGCCACCGTCGTCCGACGAAATCGTTGCATCACcgtcgtcgt
cgtccgacgaaatcgttgctccaccgtcgtcgtccgacgaaatcgttgct
ccgtcGGCATCATCCGGCGAAATCGTCGTTTCGTCCTCGTCTgTCGTCGT
CCGGCGAAATCGTTGCGCCACCGTCGTCCGACGAAATCGTTGCATCACcg
tcgtcgtcgtccgacgaaatcgttgctccaccgtcgtcgtccgacgaaat
cgttgctccgtcGGCATCATCCGGCGAAATCGTCGTTTCGTCCTCGTCTg
gcaaaatcaacaaaatcgtTGTTCCGTCGGCATTATCCGGCGAAATCGTC
GTATCATCGTCGTCCggcaaaatcaacaaaatcgtTGTTCCGTCGGCATC
ATCCGTTTCGTCGTCGTCCggcaaaatcaacaaaatcgtTGTTCCGTCGG
CATTATCCGGCGAAATTGGTGTTCCGCTGTCGTCTGGTTCCTCCACTGTT
CCATGGTCTGGTTCCTCTAATGTTCTGTTGCCTGGTTTTGTTGTTCCTTT
GTCTGCCAACACTCCAGTTTATTCAACGAACGCTTCAACCCCACGCCAAC
AATACACCACACCAAGTAGTTGTTCCTCTCGCATGTATTTCACTCCGGAG
TCAACGGATTATGTTGTTTCTTCAAGAAGTGGTGGTCGATTTCTTCAACA
ATCCAAAGATCAAAAAAGCACTCGTGAGAAGAgcaaaatcaacaaaatcg
tTGTTCCGTCGGCATTATCCGGCGAAATCGTCGTATCATCGTCGTCCggc
aaaatcaacaaaatcgtTGTTCCGTCGGCATCATCCGTTTCGTCGTCGTC
CggcaaaatcaacaaaatcgtTGTTCCGTCGGCATTATCCGGCGAAATTG
GTGTTCCGCTGTCGTCTGGTTCCTCCACTGTTCCATGGTCTGGTTCCTCT
AATGTTCTGTTGCCTGGTTTTGTTGTTCCTTTGTCTGCCAACACTCCAGT
TTATTCAACGAACGCTTCAACCCCACGCCAACAATACACCACACCAAGTA
GTTGTTCCTCTCGCATGTATTTCACTCCGGAGTCAACGGATTATGTTGTT
TCTTCAAGAAGTGGTGGTCGATTTCTTCAACAATCCAAAGATCAAAAAAG
CACTCGTGAGAAGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_024640XLOC_024640-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000582_pilongenomesc0000582_pilon:37177..38302 +
Properties
Property NameValue
Aaloc319-684:761
Aaloc256-318:697
Aaloc199-252:244
Aaloc94-195:142
Aaloc1-93:1