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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000146_pilon:559442..562166+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_024573 ID=XLOC_024573|Name=XLOC_024573|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2725bp|location=Sequence derived from alignment at sc0000146_pilon:559442..562166+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTTATAATTACCAGTCAGTTCAATCAAGTTCGGTCTTTTTGGTTTT
ACATTTTTACTGGAGTCACTTGTCAATTTTAtcagcaaaactttttaata
aaatggcCAACAACATTAACGAGTCATCGCCGGTAGATTACATTCAAAAA
GTGAATGATTGCGTCAATGATAGGCAGTTTATAGATATGCTAGTATCTCA
TAATTGGCTTAATAACGGCAGGATACATCCGTTATATGATCCagtagttt
tgatttttttaaaagagtaTTTTGTTGCCAATGAATTAAAAAAGCAACAA
AACCAAATGCAAGTCCAATTTGACCAACCATCAACCACCAACCAGACTTA
TGATGAGAAACGATTTTTTAAAAGAGGTACTGGAAGCCATAGAAAATTAA
TGGTAAGTGACGTTTAAGTTTGTTGATTAgctatttatatttttaactta
caaaaatgtcaaatattcGGGTCGAATACGATTTCTTAAGTTTAAAGATA
CTTTTAGATTTCGTTGAAACTGTCCTTTTTATTAGTATAATTAAAATTTA
AGTAGATATGCAAACTAAATATTATAACTCTaaaaaaaCGCCTACAGAAG
GTATCGAACTTGGAACTTCAATGGTACAACATATCGTATCTTACCACTAC
ACCACGATTACATTCGAAgtcttgaaaaacaaaaagcttaAATTCGAATT
TATTATAACAtcgaatttttggaaatgaaacaaagatttttgttcgaatt
gaTTTCGATACTtaataaaaactttcttttttcaaaaactgagcaaTTGC
TAGggtgatacacgttttttataagaacatctaaagtttttgaagcattg
agatatgttcttaactttttggatttGAACCGTACAAATGTTCTGAACAT
GtacttattttcgccattttttcgTGTATTtgtgtccattttcctaagaa
atcgggtgttttagagacAGCAAAgctctaaaatgttcttaacttgctct
taatatgTTGGcgatcgaagccttatgttcttatagtggggggcgtacga
tctgGCAGTATTCGGGATAAGGCCTAATTTATGGCCGGGAAGCggaaaaa
cgataaaaagtgttCGGGAAACAGTATTTTGCAAGAgccacggtgacggt
aaaacacctgatttttcgtccgggatgaggtaattcttataaaaaacaac
ggtatttcggtaaaagcCATACTTAGACGAtgtacataaaattttcggac
tataaaaaagcttgtcacagaagtcagcaaaggtgaaaaaacgcgaaaaa
cacccaaaaaacaAGGATCTTACATTTAATAATAAACCTTATTTGAAACG
TTAATGCAGATGTGCACGGGGCTTTATAAAGCCCGGTTCCTATGAAAACG
CTAGAAAAACGTTTTGTTCGCGGAGAaagtaggctacgtcatatctcctT
TATTCCACTTAAGCTTCTCTTCGAAGAGAAAAAGTTTTACGTCCGAGCGC
AGGAGATATGACCTCAGCCTAGGATAAACCAGACAAAGATtcgaattttt
gaatgtttttttttttgaattcgaTCAGCTTGTCCTGTCACCTCGAAACT
TTGGGGTAGGCTGGAGTCTACTGGGgtgtttcttttattcaatgatttat
catagcccaaagggctagatttgcagctttaacCCGCGCTTTAACCTTta
tccagcaaaaaaaatgaagcacgATTTTGTGACCTAATTGAATTTCGAGg
tgatggataggatctagcattttcatTGTTCTCGGAGTGCGAGACCAAGA
AAATTAGGTGgtaaacgctatttcgcatctctcaaaccagtaaAATTGCA
TGATTTTAGTCaggtgactttggtaggaaatcctaccaaagcccAAACAA
GGATGAGACAAACAAGAatgagcttcacttttcgatccaggccgcaaatc
tagcccttccggctttacagatatctgtgttttttttcattttttcacag
ttttgatttctttgggcgtggtcacaagttttagcctcaaaacgaggcta
aactttggggcagactagaaacttctaaaattgtctgattaggctgaaat
tttgcaatcgaaacaaaatacaaaaatagtgaTCGACCTCATACACATTC
TATTCCATTTTGCCGAATTTTTGACTTCTAGTCCTTagaattttatggga
aaattagcgggaccggtattttcaaaatatttggccgggatggcggtaat
tcgaaacctcgtacgccccccaccttATATAGTTCGTTCCTatgataaaa
aaacgtgtaatatggACTAGATTGATttcaagcttttttattttatttct
ttttaaatcaGATTCTTATGAACGATGAAATCGAAAAACGCGATTTGAGC
AAGAAAACGCCAGAAGCCGTCGCAAACCGCATAAGGGATGATGTTGCAAC
CTCGGTAATCATTTATTTGTCATGCCCTAGTTcagtaataaaagaatctt
tcaTACTTGCTTTAAATCATTAACATATCCATTTTCTCAACAGTTTTCGA
ATGGCATAGTAGAAATGAAGTTGACTGTCTTTGCATTAACCTTGCCCAAT
TTTTACGTGCAGTAAACTTTAGAACCATCTGAAATAACTCGATAAACTAC
AATTTAAGTTAtattttttcagcattttatgatgtatcttattatttttt
ttagttaATCCGAACTTTAAAAATG Coding sequence (CDS) from alignment at sc0000146_pilon:559442..562166+ >XLOC_024573 ID=XLOC_024573|Name=XLOC_024573|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1032bp|location=Sequence derived from alignment at sc0000146_pilon:559442..562166+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTTATAATTACCAGTCAGTTCAATCAAGTTCGGTCTTTTTGGTTTT
ACATTTTTACTGGAGTCACTTGTCAATTTTAtcagcaaaactttttaata
aaatggcCAACAACATTAACGAGTCATCGCCGGTAGATTACATTCAAAAA
GTGAATGATTGCGTCAATGATAGGCAGTTTATAGATATGCTAGTATCTCA
TAATTGGCTTAATAACGGCAGGATACATCCGTTATATGATCCagtagttt
tgatttttttaaaagagtaTTTTGTTGCCAATGAATTAAAAAAGCAACAA
AACCAAATGCAAGTCCAATTTGACCAACCATCAACCACCAACCAGACTTA
TGATGAGAAACGATTTTTTAAAAGAGGTACTGGAAGCCATAGAAAATTAA
TGATGGTTTATAATTACCAGTCAGTTCAATCAAGTTCGGTCTTTTTGGTT
TTACATTTTTACTGGAGTCACTTGTCAATTTTAtcagcaaaactttttaa
taaaatggcCAACAACATTAACGAGTCATCGCCGGTAGATTACATTCAAA
AAGTGAATGATTGCGTCAATGATAGGCAGTTTATAGATATGCTAGTATCT
CATAATTGGCTTAATAACGGCAGGATACATCCGTTATATGATCCagtagt
tttgatttttttaaaagagtaTTTTGTTGCCAATGAATTAAAAAAGCAAC
AAAACCAAATGCAAGTCCAATTTGACCAACCATCAACCACCAACCAGACT
TATGATGAGAAACGATTTTTTAAAAGAGGTACTGGAAGCCATAGAAAATT
AATGATTCTTATGAACGATGAAATCGAAAAACGCGATTTGAGCAAGAAAA
CGCCAGAAGCCGTCGCAAACCGCATAAGGGATGATGTTGCAACCTCGATT
CTTATGAACGATGAAATCGAAAAACGCGATTTGAGCAAGAAAACGCCAGA
AGCCGTCGCAAACCGCATAAGGGATGATGTTGCAACCTCGttaATCCGAA
CTTTAAAAATGttaATCCGAACTTTAAAAATG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000146_pilon | genome | sc0000146_pilon:559442..562166 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 496-516:2705 |
| Aaloc | 403-495:2362 |
| Aaloc | 1-402:1 |
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