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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000303_pilon:173256..178034+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_024553 ID=XLOC_024553|Name=XLOC_024553|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4779bp|location=Sequence derived from alignment at sc0000303_pilon:173256..178034+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATGGTCTGATGACATTAAACCATCTTGGTGGCCCTTGGATGTTGA
TTTCATATCACCTGACACCAAAGACAACAGACCAACAGTTCAAACCCTGG
ATAAGATTTTGCATGCATTTCATGATGACcaggttgaaaataaaatggta
TATGATTATATCTAATTTAGTTTCCAACATACTATATTCTAACATTAAGA
TATCCTGAAAGTAAATCTATTTGTGTAATTTGTGTATatgaaacaaaata
gaaatttaaCTCTTCTCAAAGGACTTGATGAGTGAGGAGGATATGCCGAA
TGCCTCAACAATCGAATCGCTAACTGACTGGAGTAAGTTACAATTAAAAA
CATGGCGCATATTGATGGATTGGTTGAGAAATCGATGGCAGGAGCCAGTC
CTCTGCCTTGCTACACAAAAGATTTCTTTAAGGTAAGAAAGCTCTTGTTA
AGGTTTATCGGCAGCTTTGAATCTGCTGATTTCATCACAAAATTGAAACT
GAACTGAATTGTTTCTGAactgtttaaaaaattgttgtttgATCTAGTGG
CTTCATaaaactttacttttttttaatttacagtaatatatttctcaggt
ctatcgacctctatgaaataatcatgcttaacattttacaattttacagt
tgtaggcgcacggtgggcctcttaaccagtcgtctttaaaatttcatttt
cagtaacagGTTTGTTATAGATCTTCTTAAAGTAGAGTtttgtccgagga
cttcctctaaccttatatatccagttgccatccttttgtaattctgtttt
ctcctttgccttcctatgccactctttgatggtttcgcgttctttcttcg
aaaaatcgtcggatactctaaattcgtctttctctaatttgtggactgat
gccagaatatgacgtttctcttcttcgttctttagcacgactttcaaggg
tcgccatctttttgttttgaacatttcgtccttccgagctcctattcttt
ctgcgctgacgatgtttacctttaatcccatttggttttgtacaacttct
tcaacataatccttatcacctacacgttgttcttctaggtcttcatcttt
gttctctccgaggttgtgaacaatgatattgtactttgttaagtttaacc
atcgttcttcttctttctcttctttgatgaaattcttgatctttacctct
tgtttctttagctcatctttagtaatgctagcgtatgtctgttgttgctt
tgattctatatcgtggtcttttttctttagctcatctttagcgatgctag
cgtatgtctgctgttgtttggatcctttaacgacatcatctttgtttaca
agatcgtcgatcttcttctccagtctatccagtctagcgaaaacacattg
ctcatcttgatctttctctttacctccagtatttgttgccttgttattgg
tcgttctttgtttacttgttttgaacttctctaataatattggcgtgact
gtgatgcatttcgcacattcgaatctccttgctttgtactgaaggcaaat
ctgtacttggtaggctggaagctccgaacaggcataatgaacaaatcttt
gacacttcctacactgcaagacatcgttatcccgtattatttcatttata
aagcattcatttggggtgcaggatccatattttgatgaaatttccgtgtt
aagattttcagaagttttcgccattttgttgcaTTGTCAAGAGCACAACC
GCACAGATTTTATTTGAccgataaaaaaataaagataaaaaagataaaaa
aattcactccattaagaattagtgaataaggagAAAATAAATGTTCAATT
TAATGTAAAGTGCATACACCATGGACTACCATCAATTGGTCagttaaaag
ttgaaaatggcTAGTGAACAAGTTGAGCTGGTTTTATCCACACCGAGTTT
ATTGCGAAATGTGAACCTCGACAGAAGGAGTTGCGAATTCAATCAAAGAC
CTCACTACTGTATCAACAAATGTAACATTCACTTGAAAAGACTGGAACAA
TTTCTAATTGGcttcaaaaatgaagtttacaAACAAGAAATCAATCTCAA
AGAAGAACTAGCCGCAAGCGTGCAGAGCTTCAACGAAAGCGACAATGTCA
ATCATCAGATTCGCCTGGAACCCATTACCAGTGGTGCGGAATTGGAGGTA
TTCACTGACgaatctcattcacttttctcGAGTGAAGAAGGTGACAGATC
AATCCTGTCAACGGAAATCAGTATGGACAATGCGCATTCACAGATACCTC
AACAACAAATCGCCATATTACAGAATGTCAAAGCACTGTTGAACCGTTTA
GATGAGCAATGTGTGAAAACTAAAGAACAATTACTGAAGGAGCGAGAACG
CACTGGCAACCTTCAAGCTCAGATTGATGCGCATGCGTACAGGAGAATTC
ATGCTCTACCAATGGCTGTGCAAAGAGAACATGAGAAGTGTGCTTATAAT
ATTCAAGAATTGAAATGGCATTGTGCATACGAAGGTCGAAGAATGTCAAG
CGTCAAAGAGAAATATCGTATCGCCCAGAAAACCAACGAAAGAATATTGG
aggaaatcaattttgtaaaggAAAGCAGCCCTTTGATATCTGAGAAACAG
CGAGAAGAAAAAGAATCGATGAAAGTGATCCAACAAAAACAGAACACAGC
AGACATCGAACTCAAAGAGGCTAGAAATAACTTAGATATGATCGAGCGAC
GTTTCGAACAAACAAAACGCCAAGCGGATCAAGAAGAGAAATATCTGGCT
CAACGATTGCTGGCACTGGCTAATGAGCAGATGACAGATTTACTAGAGCA
ACAATTTTCATACCTTTAAATTTATGCATTGCATATTACAGGAACAGAAG
TATTGTGGCTGATAAAGGTTTTTCCGGAAGAGAGCCCGTCTTTCACCCGG
ATCTTGCAAAGTGTTTGTCTTGGTTAATGTTCGGAACTGTTGACAGAGAA
GAACTTGTTATTAGAATCGCTATTATCGCATCTGTCTATTGCTTGAAGAA
CTTTTCTGAACGTGTGAGTTTTCAAATTCCTTATATTTCTGTAAATCACA
TTCCCTGTATTCCATTTTTCTACCGGATTATTGACCGGGACTGCtctgac
cgggtcactgatacaggggtgtatttaaacaatcattcttcatcttttat
tttatttatttcgtAGTGTATAATGTGGAAAGATGATCGGTTAAAGAATG
ATAAGAAATATTCGATCttttttcgatcgttttttattttaatgatgaTT
GACTGTATTTGTTTTATCCAGATGACACAAGGTAACTCAGATCATAGTGC
GTCACACTATAAAAGATTGTTTAAAAGCGATTCAATGGCGTCACTACAGC
AGAAGCTCGTTGATGATTCATTGGCTCATAAATTAGGTGAGATAAATTCa
aatagaattttcactcaaatgTTATTGGACTACTCCTCTCGATGATTTTG
TTTCTAAGATAAGATCCCTAATATAAGTGCAACGTTTATTTCGTTTCATG
ACAGAAAAGAAGACGCTTTACTGACGTTAATTCATAGAGCCTATTCGAAA
ATCCGGGTGTTTTGCATTACTTTTAAAAGcatttgataaaaatcattaaC
GATTAGATCCAAATGAAAATGGACGGGTTATTCATTAGCACATTATTTAT
AACATTGCAggacaagacaagacaagacaagacaagacaagacaagacaa
gacaagacaagacaagacaagacaagacaagacaagacaagacaagacaa
gacaagacaaaaacataacacgacatgacatgacatGAGAATACCTACCA
TtagcttacacagcattttttaaacaaaaaacaactttcCCCTCTCTCCC
TTCACAAAACTTGAGAACATTCTAATGTTACAAGATGGATTCTAATGTTA
ATTATGTCAGAACAAAAGGCGTGCTTTTgatatcataaaaaaataatatc
tttcaATATCACTTTACCCTCAAGTTGAAAATTGTGCTCGGCTGTGCCAT
TATTACACATATTTGTAAAATGGTCTTCTTATTTTATAGATATATTTCAA
GTTTGTGCTGTTGGTTACTTCATTGGATTGAGCGTGAACCTCTGTCTTGA
TGGGGAAGTGGTATCACACTTCACCAGCAACAGCCAAGGGATAAATATTC
TAATCCAAGGGGACGAGATATTTGCCTTGTCCCTTACTCAAGGTAAAAGt
cctattttttatattgtttACATTGCTTTCAGATAAGCtttttttCGAAT
CGAAATTTTTTCAGTATATGTATGGTATAACCTGATTATTGACTCTTGAA
CTTATTTTCTGAACTCCAGATACCTTGCCAATGGATTGTAATCGACACAA
TCCATTCTGCTGCTCCGAAAGCGATGGAGACGAAACATTTTCTTGCCCTA
ATTGCCTCCTTGACTACCATTCGGTCTGTGCCGATAGGTTTTCCGACTGT
GGTTGTGTACAAGAaggaaaagaattaaaataccGGTAAGTCTAAGTGGT
CGATTTTACCATATTTCTCTACtatttgataaaagttttcAGTAGTCATT
TTTAGCAGTTTATTGCTAGGAGCTTGAGATAAAAATTCTGTGTAATGGCT
CCTGCCATCGATTTCTCAACCAATCCATCAATATGCGCCATGTTTTCAAT
TGTAACTTACAccaatgttttattttgatttccttTCAGAGTAAGAACTG
CCATAAAAGAAAAGGCGCTCCAACTAACG Coding sequence (CDS) from alignment at sc0000303_pilon:173256..178034+ >XLOC_024553 ID=XLOC_024553|Name=XLOC_024553|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1134bp|location=Sequence derived from alignment at sc0000303_pilon:173256..178034+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATGGTCTGATGACATTAAACCATCTTGGTGGCCCTTGGATGTTGA
TTTCATATCACCTGACACCAAAGACAACAGACCAACAGTTCAAACCCTGG
ATAAGATTTTGCATGCATTTCATGATGACcaggttgaaaataaaatgATG
AAATGGTCTGATGACATTAAACCATCTTGGTGGCCCTTGGATGTTGATTT
CATATCACCTGACACCAAAGACAACAGACCAACAGTTCAAACCCTGGATA
AGATTTTGCATGCATTTCATGATGACcaggttgaaaataaaatgGACTTG
ATGAGTGAGGAGGATATGCCGAATGCCTCAACAATCGAATCGCTAACTGA
CTGGAGACTTGATGAGTGAGGAGGATATGCCGAATGCCTCAACAATCGAA
TCGCTAACTGACTGGAATATATTTCAAGTTTGTGCTGTTGGTTACTTCAT
TGGATTGAGCGTGAACCTCTGTCTTGATGGGGAAGTGGTATCACACTTCA
CCAGCAACAGCCAAGGGATAAATATTCTAATCCAAGGGGACGAGATATTT
GCCTTGTCCCTTACTCAAGATATATTTCAAGTTTGTGCTGTTGGTTACTT
CATTGGATTGAGCGTGAACCTCTGTCTTGATGGGGAAGTGGTATCACACT
TCACCAGCAACAGCCAAGGGATAAATATTCTAATCCAAGGGGACGAGATA
TTTGCCTTGTCCCTTACTCAAGATACCTTGCCAATGGATTGTAATCGACA
CAATCCATTCTGCTGCTCCGAAAGCGATGGAGACGAAACATTTTCTTGCC
CTAATTGCCTCCTTGACTACCATTCGGTCTGTGCCGATAGGTTTTCCGAC
TGTGGTTGTGTACAAGAaggaaaagaattaaaataccGATACCTTGCCAA
TGGATTGTAATCGACACAATCCATTCTGCTGCTCCGAAAGCGATGGAGAC
GAAACATTTTCTTGCCCTAATTGCCTCCTTGACTACCATTCGGTCTGTGC
CGATAGGTTTTCCGACTGTGGTTGTGTACAAGAaggaaaagaattaaaat
accGAGTAAGAACTGCCATAAAAGAAAAGGCGCTCCAACTAACGAGTAAG
AACTGCCATAAAAGAAAAGGCGCTCCAACTAACG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000303_pilon | genome | sc0000303_pilon:173256..178034 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 529-567:4741 |
| Aaloc | 364-525:4372 |
| Aaloc | 211-360:4092 |
| Aaloc | 148-207:272 |
| Aaloc | 1-147:1 |
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