|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000355_pilon:161687..163704- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_024542 ID=XLOC_024542|Name=XLOC_024542|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2018bp|location=Sequence derived from alignment at sc0000355_pilon:161687..163704- (Clytia hemisphaerica_ch_hm2_pilon)
TCTGACAAAATCGTTAACAAATTGACAAAGATAAAAAACATAATGAAAGA
AAATATTAAAGGTGCTTTTATATATATTTTTTTTATTTAGACTGATTTTT
TTTTTACTTTGAATGAAAGCATACACCCGATGATCGGCTTCAAGGCGTGA
GAAAGAAAAACGTTTTTTTATTTGTTAGAATTTGGCATACTAACGAACTT
ATTAAAAAGTAGTTATTGTTTTTCTTTTATATTCAGGAACAACTACTGTG
GACGATAAAAGTGACAGTAAAAATGAGGTATACCCTTTAGCAATTTTGTT
TCTGGAATTTTCGATGTTTTGCCAAGTAAATAAAAAGGCACGTGAAGTAG
AACACCTACACAGTATGCCATACTGAAAACCATTAAAAAACCATTAAAAA
ACCATTATAATTTTTTGTTGTTTTTTAATTCCTAGTTAATTTTAATTTCG
ATTTTAGATAATGCTCTCACCCGCTGCTCGAAATTATTGCTCAAAACTGC
CACCAAAGGATGGTTATTGGTTTAAGCAGGTGAGATATATTTAAATTCCT
GCGATATATTCTCAATTTCGAAATGAGTCATTCGAGAAGGAGTGATAAAA
AAGATGGGTAATATTTTTTTAGTCCTTGACTAAAGAAATTGATTGTTAAA
TTTCATACTTTAGGGATATTTACGCGTAAAACGAAAAATTGTTAACGATG
ACGATGGCGAGGATGATGAAGGGGTTGATAGCGAACATGATACCAAGCAT
AATACCGAGCATGAGGATGTTGACAGTGAACATTTCATCGTTGAGGAATC
GCATCGTGGTAAGATTGTCTTTAGTGTACCAATGGTAACATGGAATTATA
ATTGAATCCCTCCTCTCTATAAACCTCATTTTACCCATTTTACTTACTTT
GTTTAGAACGAACTTGCTTTTTGGACCTACCTCGGAGGTCCTTTAAATTA
ACCGATGTTCGTGTGTTCGTTCGTTTGTTACCAGCTTTTCTCGGGATTGG
CCCATTAGTTTTTTCTGATTCCCAAAAAGTGACGGAGCCCGATTCTCGAA
ACAAAAATTCCGGCGGAAAATCCCGGAAATCGCTGAATTTCCTAATATTT
CTTTGTTTTTTTTTTCACACAAAACATCATATATAGCAATGCTGGACCAT
ATCATCAATTTTTTTTCAGTCCCTTTGCGTTTTTATTTTCTATTTCCATT
CTATATTTACTATTAGGTAGGTCCATTTTGCATTCTGTTTGTTTGTATTT
TACTGATTGCCTGAAACTGGGCTTAATACCAATATATCTCGATTCATATA
ATTTTTATTTTCGAATCAGTTTCACCGCTTGACGAATCTACAGAAAAACA
TCAGTCGTTCCTAAATGCTGCCAATGTAGTGAGATCAGATAGCACCGAAA
ATGAAAAACTTTCTGGTAAGTTATAGAAATCTTTATATACGATAACATGA
AATTAAAATGAAACCTCTCTCTCTCTCTGCTAATCTTAAAATATTATTTT
ACTTGCTTCGTTTTGGACAAAAGTCCTTGCTTTTATGTATTTTACTGATT
GCCTGAAGCTTGGCTTAATATCAATATATCTCGATTCATATAATTGTTAT
TTTCGAATCAGTTTCACCACTTGACGAATCTACAGAAGAACATCAGTCAT
TCCCAAATGCTGCCAACGTGTTGAAATCAGATTGCAACGAACAGAAAATT
GAAAGGCCATTTTTGCATTCAAAAATGATTGGCGTATTTCCTAGTGGTAA
GATTGTCTTGAAAAACCTCGGGGGGGGGGGGTAACAGAAAATCATAGTGA
AACCTCTTCGTTAATTTTAGTATAGCTTTTTACTTGTTTGGATAAAAACT
CCTATTTTGTCTGTATTGATTGCCTGAAACTGGGCACAATATCAATATTT
CTCGATTCATATAATTGTTATTTTCGAATCAGTTGCACCGCTTGACGAAT
CTACAGAAAAACATCAGTCGTTCCTAAATGCTGCCAATGTAGTGAGATCA
GATAGCACCGAAAATTAA Coding sequence (CDS) from alignment at sc0000355_pilon:161687..163704- >XLOC_024542 ID=XLOC_024542|Name=XLOC_024542|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1272bp|location=Sequence derived from alignment at sc0000355_pilon:161687..163704- (Clytia hemisphaerica_ch_hm2_pilon)
TCTGACAAAATCGTTAACAAATTGACAAAGATAAAAAACATAATGAAAGA
AAATATTAAAGTCTGACAAAATCGTTAACAAATTGACAAAGATAAAAAAC
ATAATGAAAGAAAATATTAAAGGAACAACTACTGTGGACGATAAAAGTGA
CAGTAAAAATGAGGAACAACTACTGTGGACGATAAAAGTGACAGTAAAAA
TGAGATAATGCTCTCACCCGCTGCTCGAAATTATTGCTCAAAACTGCCAC
CAAAGGATGGTTATTGGTTTAAGCAGATAATGCTCTCACCCGCTGCTCGA
AATTATTGCTCAAAACTGCCACCAAAGGATGGTTATTGGTTTAAGCAGGG
ATATTTACGCGTAAAACGAAAAATTGTTAACGATGACGATGGCGAGGATG
ATGAAGGGGTTGATAGCGAACATGATACCAAGCATAATACCGAGCATGAG
GATGTTGACAGTGAACATTTCATCGTTGAGGAATCGCATCGTGGGATATT
TACGCGTAAAACGAAAAATTGTTAACGATGACGATGGCGAGGATGATGAA
GGGGTTGATAGCGAACATGATACCAAGCATAATACCGAGCATGAGGATGT
TGACAGTGAACATTTCATCGTTGAGGAATCGCATCGTGTTTCACCGCTTG
ACGAATCTACAGAAAAACATCAGTCGTTCCTAAATGCTGCCAATGTAGTG
AGATCAGATAGCACCGAAAATGAAAAACTTTCTGTTTCACCGCTTGACGA
ATCTACAGAAAAACATCAGTCGTTCCTAAATGCTGCCAATGTAGTGAGAT
CAGATAGCACCGAAAATGAAAAACTTTCTGTTTCACCACTTGACGAATCT
ACAGAAGAACATCAGTCATTCCCAAATGCTGCCAACGTGTTGAAATCAGA
TTGCAACGAACAGAAAATTGAAAGGCCATTTTTGCATTCAAAAATGATTG
GCGTATTTCCTAGTGTTTCACCACTTGACGAATCTACAGAAGAACATCAG
TCATTCCCAAATGCTGCCAACGTGTTGAAATCAGATTGCAACGAACAGAA
AATTGAAAGGCCATTTTTGCATTCAAAAATGATTGGCGTATTTCCTAGTG
TTGCACCGCTTGACGAATCTACAGAAAAACATCAGTCGTTCCTAAATGCT
GCCAATGTAGTGAGATCAGATAGCACCGAAAATTAATTGCACCGCTTGAC
GAATCTACAGAAAAACATCAGTCGTTCCTAAATGCTGCCAATGTAGTGAG
ATCAGATAGCACCGAAAATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000355_pilon | genome | sc0000355_pilon:161687..163704 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 553-636:85 |
| Aaloc | 418-549:406 |
| Aaloc | 322-414:698 |
| Aaloc | 175-318:1356 |
| Aaloc | 103-174:1562 |
| Aaloc | 64-102:1781 |
| Aaloc | 1-60:2019 |
|
