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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000398_pilon:54743..56880- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_024469 ID=XLOC_024469|Name=XLOC_024469|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2138bp|location=Sequence derived from alignment at sc0000398_pilon:54743..56880- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCCAGAATTCCTGAGCATGCGCTGTTAAGATTACCCACAATACCTTT
CTTAATGTCCAAATCACAAACACAAATAAACATGGCGGATGAAGTGGTAG
GAGACGTAGTTTCATTCTTGGATAAACTTCCTGATGAGTTTCGAGATATA
CATTCTCGTATTGATGCGATGCAAGCTTTAGAACATTGTCAGATTAGATT
GGAAAATGTTACAAACATGCTGAATTTACTGAACGATTTACTTAAGAATG
AAAACAACCAGTTAATTATTGATTCAATGCAATCCCTCTTGAGGACAGCA
CAAGATGCAAGCCATAGATTGAGTGGTTTGCTAGTGAACCGTCGTCATCA
AACTAACCAGACTCCTAGTATGGGAAGACCGAGAAAGGAGTTAACAGTGG
ATGAGATAACTAATGGTTTTGAGATCTTCAGGAACTGGAAAGTTGTGGCA
TGGACATTAGGTGTCTCTTACAGAACGTTATTGAGGAGGCGCAGTGAGCA
TGGAATAGATATATCTCAAGTAAGAGGCCCAAGAGTCACATATACAGTCA
TATCCCATGAAGATTTGTGTAGTCAAATTCAAGAAATATTGCAAATTCTT
CCAGATGCTGGTGAAACGATGGTAATAGGTGCGCTGAGATCAAGGGACAT
ATTTGTACAAAGAAGAAGAATTCGCGATGCAATCAATGATGTTGATCCTG
TTGGGCGAGCATTAAGACGGACAATATCAGTTGTTAGAAGAGTTTATAAT
GTTGCTAGTCCGAATTCACTTTGGTAAGAAAGGATAATTTTTTGCTTTTA
AAAGGAGGATAGCATAATGATTTGAAGGTTTTTTCAGAGGATTGTATCTC
TGGTATCTTTCGCGAAATACAGTACACCTATGTAATTCGAAAACTTATTC
GAAAACTTTTACAAACAAAACAACTAAAGCTTAAAATCCCGGGGGGGGGG
TACTTAGGCAAAATGGGTGCCGGGTATGTGCGAGCCATAAGGGTACCTTT
TCTCATTCCTCAAAAGTCTCTCAAAGGGGTACAAATTCAAAAGTTAGTCT
CTGAAAGGGTCCCAAAATCACAAAAATCAAAAATTTCTCTCTCAAAGGGT
CACGATTTCCAAGAATTTTGACCAAAATTTGGGGAAAATCGAACCAAAAT
TTGGAAAAATTGGACCAAAATCTAGGAAAAAGTCTCTCAAAGGGTCCCAA
AATCACCAAAATTTTCTCTCTCAAAGGGTCGATTTTCGATTTTCGCCTCG
GACATACCCGTCACCTCGCAAACCTAGTACCCCCGCCTGGGCTTAAAACA
TAATCAGACTTGATCAAACTCCGCCTATAATTCGACAATTCGTGTATAAT
TTCAAAACTATCATTTATCTTTTAGGCATATTGATGGTCACCACAAGTTG
ATTCGCTGGCGGTTCGTAATCCATGGTGGTATCGACGGATACACGAGAAG
GATAACTTATCTCCACTGCAGTGATAACAATCGTGCTGGCACAGTTTTAA
CATTATTTGAGAATGCTGTCCGAAATTTTGGTCTCCCATCAAGAGTTCGA
AGTGATATGGGAACGGAAAATGTAGACGTAGCCAGATTTATGGAGAGGAA
CAGGGGGCATAATAGAGGTAGTATTATTATGGGATCATCCGTCCATAACC
AGCGCATTGAGCGATTATGGCTGGACGTCAAGCGGCTTGTTGTTGTTCGC
TTTCAATCCATATTCTACTTCCTGGAAGATGAAGGTTACTTGGACCCTAT
TGACGAATTGCATTTGTATATCTTGCATTTGATTTTTCTCCCCATTATTA
ATATAGCTTTAGACGAGTTGGCAAGAGATTGGGACAATCATCCGTTAAGT
AGTGAAAATAACTTTTCTCCTGGGCAGTTGTGGCACCTTGGCCTGATGAG
GTATCGAGACGAAAACCCAAACGGCTACGCTCAGCTTCAAAATCCTAACT
GGAATGAGTATGGTATTGACTACCAAGGACCAGTAGCAGATGACGAGGAC
TTGGGAATAGTCGTACCGAGAACCTATTATCCATTGACGGCAGAGGAACA
ACGCCGTGTAAACGATATAATAGCTGGAGCCCGTCGAAATGACGAAGTCG
AAACCTATATAAACGTTATAAATTGTTTAGAAAACTAA Coding sequence (CDS) from alignment at sc0000398_pilon:54743..56880- >XLOC_024469 ID=XLOC_024469|Name=XLOC_024469|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3072bp|location=Sequence derived from alignment at sc0000398_pilon:54743..56880- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCCAGAATTCCTGAGCATGCGCTGTTAAGATTACCCACAATACCTTT
CTTAATGTCCAAATCACAAACACAAATAAACATGGCGGATGAAGTGGTAG
GAGACGTAGTTTCATTCTTGGATAAACTTCCTGATGAGTTTCGAGATATA
CATTCTCGTATTGATGCGATGCAAGCTTTAGAACATTGTCAGATTAGATT
GGAAAATGTTACAAACATGCTGAATTTACTGAACGATTTACTTAAGAATG
AAAACAACCAGTTAATTATTGATTCAATGCAATCCCTCTTGAGGACAGCA
CAAGATGCAAGCCATAGATTGAGTGGTTTGCTAGTGAACCGTCGTCATCA
AACTAACCAGACTCCTAGTATGGGAAGACCGAGAAAGGAGTTAACAGTGG
ATGAGATAACTAATGGTTTTGAGATCTTCAGGAACTGGAAAGTTGTGGCA
TGGACATTAGGTGTCTCTTACAGAACGTTATTGAGGAGGCGCAGTGAGCA
TGGAATAGATATATCTCAAGTAAGAGGCCCAAGAGTCACATATACAGTCA
TATCCCATGAAGATTTGTGTAGTCAAATTCAAGAAATATTGCAAATTCTT
CCAGATGCTGGTGAAACGATGGTAATAGGTGCGCTGAGATCAAGGGACAT
ATTTGTACAAAGAAGAAGAATTCGCGATGCAATCAATGATGTTGATCCTG
TTGGGCGAGCATTAAGACGGACAATATCAGTTGTTAGAAGAGTTTATAAT
GTTGCTAGTCCGAATTCACTTTGATGTCCAGAATTCCTGAGCATGCGCTG
TTAAGATTACCCACAATACCTTTCTTAATGTCCAAATCACAAACACAAAT
AAACATGGCGGATGAAGTGGTAGGAGACGTAGTTTCATTCTTGGATAAAC
TTCCTGATGAGTTTCGAGATATACATTCTCGTATTGATGCGATGCAAGCT
TTAGAACATTGTCAGATTAGATTGGAAAATGTTACAAACATGCTGAATTT
ACTGAACGATTTACTTAAGAATGAAAACAACCAGTTAATTATTGATTCAA
TGCAATCCCTCTTGAGGACAGCACAAGATGCAAGCCATAGATTGAGTGGT
TTGCTAGTGAACCGTCGTCATCAAACTAACCAGACTCCTAGTATGGGAAG
ACCGAGAAAGGAGTTAACAGTGGATGAGATAACTAATGGTTTTGAGATCT
TCAGGAACTGGAAAGTTGTGGCATGGACATTAGGTGTCTCTTACAGAACG
TTATTGAGGAGGCGCAGTGAGCATGGAATAGATATATCTCAAGTAAGAGG
CCCAAGAGTCACATATACAGTCATATCCCATGAAGATTTGTGTAGTCAAA
TTCAAGAAATATTGCAAATTCTTCCAGATGCTGGTGAAACGATGGTAATA
GGTGCGCTGAGATCAAGGGACATATTTGTACAAAGAAGAAGAATTCGCGA
TGCAATCAATGATGTTGATCCTGTTGGGCGAGCATTAAGACGGACAATAT
CAGTTGTTAGAAGAGTTTATAATGTTGCTAGTCCGAATTCACTTTGGCAT
ATTGATGGTCACCACAAGTTGATTCGCTGGCGGTTCGTAATCCATGGTGG
TATCGACGGATACACGAGAAGGATAACTTATCTCCACTGCAGTGATAACA
ATCGTGCTGGCACAGTTTTAACATTATTTGAGAATGCTGTCCGAAATTTT
GGTCTCCCATCAAGAGTTCGAAGTGATATGGGAACGGAAAATGTAGACGT
AGCCAGATTTATGGAGAGGAACAGGGGGCATAATAGAGGTAGTATTATTA
TGGGATCATCCGTCCATAACCAGCGCATTGAGCGATTATGGCTGGACGTC
AAGCGGCTTGTTGTTGTTCGCTTTCAATCCATATTCTACTTCCTGGAAGA
TGAAGGTTACTTGGACCCTATTGACGAATTGCATTTGTATATCTTGCATT
TGATTTTTCTCCCCATTATTAATATAGCTTTAGACGAGTTGGCAAGAGAT
TGGGACAATCATCCGTTAAGTAGTGAAAATAACTTTTCTCCTGGGCAGTT
GTGGCACCTTGGCCTGATGAGGTATCGAGACGAAAACCCAAACGGCTACG
CTCAGCTTCAAAATCCTAACTGGAATGAGTATGGTATTGACTACCAAGGA
CCAGTAGCAGATGACGAGGACTTGGGAATAGTCGTACCGAGAACCTATTA
TCCATTGACGGCAGAGGAACAACGCCGTGTAAACGATATAATAGCTGGAG
CCCGTCGAAATGACGAAGTCGAAACCTATATAAACGTTATAAATTGTTTA
GAAAACTAAGCATATTGATGGTCACCACAAGTTGATTCGCTGGCGGTTCG
TAATCCATGGTGGTATCGACGGATACACGAGAAGGATAACTTATCTCCAC
TGCAGTGATAACAATCGTGCTGGCACAGTTTTAACATTATTTGAGAATGC
TGTCCGAAATTTTGGTCTCCCATCAAGAGTTCGAAGTGATATGGGAACGG
AAAATGTAGACGTAGCCAGATTTATGGAGAGGAACAGGGGGCATAATAGA
GGTAGTATTATTATGGGATCATCCGTCCATAACCAGCGCATTGAGCGATT
ATGGCTGGACGTCAAGCGGCTTGTTGTTGTTCGCTTTCAATCCATATTCT
ACTTCCTGGAAGATGAAGGTTACTTGGACCCTATTGACGAATTGCATTTG
TATATCTTGCATTTGATTTTTCTCCCCATTATTAATATAGCTTTAGACGA
GTTGGCAAGAGATTGGGACAATCATCCGTTAAGTAGTGAAAATAACTTTT
CTCCTGGGCAGTTGTGGCACCTTGGCCTGATGAGGTATCGAGACGAAAAC
CCAAACGGCTACGCTCAGCTTCAAAATCCTAACTGGAATGAGTATGGTAT
TGACTACCAAGGACCAGTAGCAGATGACGAGGACTTGGGAATAGTCGTAC
CGAGAACCTATTATCCATTGACGGCAGAGGAACAACGCCGTGTAAACGAT
ATAATAGCTGGAGCCCGTCGAAATGACGAAGTCGAAACCTATATAAACGT
TATAAATTGTTTAGAAAACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000398_pilon | genome | sc0000398_pilon:54743..56880 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 775-1536:763 |
| Aaloc | 1-771:2139 |
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