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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000366_pilon:229554..234700- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_024441 ID=XLOC_024441|Name=XLOC_024441|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5147bp|location=Sequence derived from alignment at sc0000366_pilon:229554..234700- (Clytia hemisphaerica_ch_hm2_pilon)
AAAGTTTTTGCACCAGTAAACCAAATGTTTTCTTCTCGACTAACAATGCT
TTGTATTTTACAATTTACAGGCAATAGAATAAGTCGACATGGACTTGGTG
ATTATGCAACAACTGCTGCTTTTGACTTGCTGAAAGCTTCTGGTGAAATT
ATCACCACTACTGGACGAATGCTGCAAGACAAAGAAGTAGCTCACGGTAT
AGTGCGGGGAATATGATACAAAATATACACCAGTATTCAGTATTTATCTT
TTGAAATCAGTAAAAAACAACTGCGCGAACTTACCGTCAGGGAAATTTTG
AAAGTAACTTTTATCGTTCGTTGTACATTTTCCATCCGTAACTTTTGAGT
GAGAGGGCAAGGTAGATCTTTCGCCTTAACTTTCGTTTGCTTCAGTTTGC
TTTCAATTATCAATTTTTTTGATAAAAGTTCAGAGAGTAAAGAGTCCAGA
TATTTTATTGGATCGACAAAATTCGATGGACAAAAATTCGAAGGATTTCG
TAACAGGGTCAAAATGACGTATACAGGTCTGGTTTTGGCAGTATTATGGT
CGACCGTAACTGTAACAAATGTTTCTATTCTTTACAAGGTATCCTTATGG
TAATTGCGTGGATAATTTGTTCAACTATCGGCATTTTCATGGCTCGTTAC
ATGAAGCAAGCTACAAAAGAAAAGAAGATCACCGGCAAACCGGCTTGGTT
CCCTGTGAGTGATTTTAAGCGTTTGAAACGGGGGGGGGGGTTAAGCTTAA
AGCTGTAATTTCCACTAACCACATTGTTTACAGTTGTGTTCAGTAGTACT
TACAATACACAGTGGGCTTCTGCTCACGCTCGAACAAAGAAGTTTTTTAT
ATGAATTATGAAGCATACTTTCTTTTATAAGAACTAGTTAGTTCTTATTC
ATTGGGCACTTTGAGCCTCAGATTTTTTTGTTCTTATTTATAGGGTGAAA
TTGAAGTATTTTAGGATTTATACCCGCAATTTTTACTACTTTGACCCTAA
ATTGCTTGAATTTGAGTAAATCTAGGCTCAGGATTGTTCTTAAACTGCTC
TTATCTTTTGGCGATTTTGAGTCTCATTGTTCTTATAAAATTGTTAAAAA
AAAAAAAAAGTGTAGAGGTCTGAATGTCAAACTTATTGGAGCATAGGTTT
CATTGTATTTTTATGGATAAATATTTTGTTTCAGCTTCATCAAGGTTTGA
TGATGTCATGTGTTGTTGTTTTCTTCATCGCTTTCATCGTCATCTTGGTG
GAAAAACAAGGATGGGCTGTGAGTGTGTTTCCTTTCCTTTTTCATACATT
CTATCAAAAATTGGGATGAAGTTATTTGGCGAAAGTGTAAATGATCCATG
GTACCCTTAGGTCCTCCGGAAATCGGCAAGATTAATTTTGATTTTTGGAC
ATCGATTGTCACCTTGCCGAAATAGCGAGTTGATGTATGTGTGTTTTTCT
GTGACGGAGACGGTTAGCTTCTGATTTGTCTTGATCCTGACTGACTGAGG
ACGCTTGTAAATCAGCATTTTTCGTTTTGGCACAGGTCAAAACGGCGTGT
TATTCAGTCACTCCACCGTCCTAAAAAGTGCAAATATACCTAAACTCGCT
TTAAACTCGTCCCGATATTAGTAATATGATAAATTAAACTCTACCAAAGG
GAAAAAGAGCAAAGGATTTGGAAGTTCTAGAATTAAAGAACATAAAAAAG
TTTGAATCGCACCTTACGATGGGAAACCTCACCCATGAACAAGTTAACAA
TTTATTTTTCTTTGTTTATAGGAGAGTGCAGGAACTCATGGTATTCTGGG
ATTAATTGCTATCATTCTTGGCTTAATTCAGGTAACAACAGAGCTCTTTA
ATATCATGTACATTTTTTTCAAGTCTTAACAGAGTGTGTCACAGACCCAC
TGGGACGCCAGCCCTACTAGAAAATTTGACAAAAATTTCGTCCCCGGTGG
GAAAAAGCCCTCGAATTTCAGGCCCACTGGGAAATTGACCTTGATATCCT
CAATGTTTAAAAATTGTACTCTAAAACCACCCCCTCTGGATTTTTGGACC
TCCTACCCCGGTGGGGTGGAGGTCCTATAAATTAACCTTTGTCCGTTCGT
CCGTTCGTCCATTCGTTCGTTCGTTATTAGCTTTCCTCGTGATTGGCTCA
TTAGTTTTTTCTGAATTTTTGCACAAAGATGTGTAACTATAAACCCTCGA
ATGTGACGGAGCCTGATTTTCGAAAAAAATTTTGGGCAAATTTGGGCCAA
AAAACGGCTAAAAAACGGGTTTTTTGGACTTGGTGAAAACTTGGTGATTT
TTTGCATGAAAGTAGGGTACATCATAAGTAAAAGATGGCTCAAGTAGATT
TTTTCAAAAAAAATTTGTTGGCTGAAAAAACGTATGTTTATCTATAAGAA
TCACTATTAATAAGCATACATCAATGTTCTTAGCCAAATTACTAAATTTT
TTGATGAGATAGATCTTTTTTTGCTCACAAAGTCTTGAATATGAAAGAAT
ATTTGAAGAGCATGAAATTTTGGTTTCTAAACGTTTTTTTATAAGAAACA
AACGACTAGTCTTAATAGATCGTCACTATTTGTGTTCTGAATGATTGTTT
AATGGTCACGCTCACTTAGATATCAATTATATATGTGTTAAATGCATAAC
CAGGTAGGTCCATAAAAGTATCACTTGTTTAACTTTGGAACAATAGAATT
TCCATCCCCATCGGGAATTCAATAGGAAAGTTCCAGTGGGGCTGTGAGAC
AGGGGTGTTATAAAATTTAGAATTAATAACATTTTAAAAGACTGGCTTAT
TTCTTCTTACCTGGGACAAGACCAAAACAACGTCTAGTCTGTCCATATCT
GACGACTGGACGAAATGAAGATTAAACAATATTATATCAATTTTAATATT
ATTTCGTTGAGGTCGATGGACCTGTGAAATATAGTTTTCTGATTGTAATA
AATAAATTATTTTTATTTTGCAGCCGTTGATGGCCATGGTGCGACCAGCG
CCGGATGCTGATAGGTAACAGAATAACTCCCTTTTTTCAATACAATGCAA
ATAGCTCTACCTGTGATTTGCGTCTCTGGTGTCGAGCACTAAGATAATCT
GAAAGTAGTATGGGTTGATTGTAATGGTTTATTGACACAAAATTATTTAC
ACCACATATCTTGTATAATTGGCGTTTCTCGATGAAAATAATTATTTTAT
TTTTGTATTTTTCCATGTCAGGCGTTTCATTTTCAATTGGTTTCATAGAA
GTTTTGGAATGATTGCGTGGTTATTAGCCGGTATACTTTTCGTTTTCTTC
TGCTACTATTCCTGTAGACTAGTAAACCCAGTAAACTAGTCGTTGAAAAC
AGACCCATATACAAAAAATCAAGCTCCAAATAAAAATAATCGAAGGGGTG
AAGTTGCGTCTCTTTTCTGAATTTCAACGACTAGAAGCTACTTCCCTCAA
AAAACGTTGTTTAATTTTACAACTTTTTTTAGGTTTTTGAGAATTCATTC
AACTTTTATGACTAAATGATATTTCATAGTAACATTGAACATGGGAACAT
ATAAATAAATGAGCATTTCTAAAAACGCAATAAACAGAAAGAAAAATAAA
TGCAATCCCGCACGGGTCAGACATACAGAAATCTGTATGTCTCTCCTTAC
GATTTTAGGTGAAGAAAAAAAGGCGTTGGAAGTAGCTTCTAGTCGGTTAT
TTTCCTTTTCTCTCACGGGCGCTGAATATTTAATTAGTGTTTACATTATT
TGATTGACAGTTTTATTATAAGTAAGAACCGACTAGTTTACTAGTCTACT
ATACCTGGAGAGAGTTCAGAATTCAAGTGTTGTTGTGTCTACCAAGCCTC
GCTTGTTACTGTGAAAAAAAGAAAACACTTCTTTAGGCGTACAAACTTTC
GCTAACAGCAACTTTCGCGAGGTTGAAAAATCGCGAAATTTATGACATTC
ACTTTCGCGAATTTGACGAAAAAATCTTTTTAGCGAGCATAAACTTTTAC
GAATCAAGATATAAAAGATTAAAGTTTTCACACAAAAATATGACTTGAAG
GGACAAATACTTCTTGAACAGGATTGAAACGTTTGTCTTTTTGACTAATG
AGGCTTTAACAGGCTAAAAAGTGCCATAAATCTTACATTTTATTTTAGGC
TAGAAGTTTTATTTTCTATTTTTGTTAAAAAGTTTTTGTGAACATAAACT
TTCGCGAATGGCGCCTTCAACAATTTACTTCAAGCCATTTACTTTCGCGA
AAAAAGGTAAAGTTCGCAAAGATTGCGAAAGTTTCAAATGGTGTATGATT
TGAGAGCTTGGTAAAGTTTGAAAACTCACCAGGTTAAATCGTAGATAGAT
TTCACTGACTTCACACTGGAGCAGATTTTTGTTTTTACTTACAGTATATA
ATATTTTCAATTTGTCTATTATAGGTTTAAGCATCATTTATGCTTTCTAT
GAACATTTGCAAGAAAGTTACACAGAGATGTTGGTATTCATGATAGTGGT
CGTTGTTTTGTTCATTTTATTGGACATCGTTCTTTGTGCTTCATCGAAAA
ATTCTGCATCAGCTGATGGTAAGATTTCCCTCTTTTCTTTTTCGTTTATT
TGTTTTCTCTGGTTTCCATCAAAAGCTAACTCAATAGCAAATTTATTGCT
CCAGTGTAGTTTTATTATGACTCCAGCATTTTGCGTAAATGCGTGAGTGG
GCAAATGGGCGCGAATTTTTTTAAATGAAAATCCGATTTAGTGCAGTTTT
CCCCGATTTTTAGAAGTTTCTTTGGTTTCCCCAATTTTTTAAGATTTTCT
TAAAAATCGGGTTTGCCTGGCTTTTGATAAAGTGCGCAAAGCGTGAATCC
TATCGTTGCGATGGAAAAGTAAGGCTGATTATACATGTGTAATTGAATCC
TTATATTAACGCGTTTTTTATAGTGGCGTACAGCGGCACAAATAATATGG
TAGATGTCAAACACACTTCGTCAAATAGCGTAAGTAAAGTTCTGAGGGGG
GTTGTAGGGGTTCGAAATATCGTTTTCCCGTCAAAATTTTGGCTGAATCC
CAGATTCCCGAAAATTGAAAAAAATGATAACACCGTCACACCGGTTTGTA
GAAGTCAAAATACCGGAATATTGACAAGAAATAATGCTAATCACCGT Coding sequence (CDS) from alignment at sc0000366_pilon:229554..234700- >XLOC_024441 ID=XLOC_024441|Name=XLOC_024441|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1848bp|location=Sequence derived from alignment at sc0000366_pilon:229554..234700- (Clytia hemisphaerica_ch_hm2_pilon)
AAAGTTTTTGCACCAGTAAACCAAATGTTTTCTTCTCGACTAACAATGCT
TTGTATTTTACAATTTACAGGCAATAGAATAAGTCGACATGGACTTGGTG
ATTATGCAACAACTGCTGCTTTTGACTTGCTGAAAGCTTCTGGTGAAATT
ATCACCACTACTGGACGAATGCTGCAAGACAAAGAAGTAGCTCACGAAAG
TTTTTGCACCAGTAAACCAAATGTTTTCTTCTCGACTAACAATGCTTTGT
ATTTTACAATTTACAGGCAATAGAATAAGTCGACATGGACTTGGTGATTA
TGCAACAACTGCTGCTTTTGACTTGCTGAAAGCTTCTGGTGAAATTATCA
CCACTACTGGACGAATGCTGCAAGACAAAGAAGTAGCTCACGGTATCCTT
ATGGTAATTGCGTGGATAATTTGTTCAACTATCGGCATTTTCATGGCTCG
TTACATGAAGCAAGCTACAAAAGAAAAGAAGATCACCGGCAAACCGGCTT
GGTTCCCTGTATCCTTATGGTAATTGCGTGGATAATTTGTTCAACTATCG
GCATTTTCATGGCTCGTTACATGAAGCAAGCTACAAAAGAAAAGAAGATC
ACCGGCAAACCGGCTTGGTTCCCTCTTCATCAAGGTTTGATGATGTCATG
TGTTGTTGTTTTCTTCATCGCTTTCATCGTCATCTTGGTGGAAAAACAAG
GATGGGCTCTTCATCAAGGTTTGATGATGTCATGTGTTGTTGTTTTCTTC
ATCGCTTTCATCGTCATCTTGGTGGAAAAACAAGGATGGGCTGAGAGTGC
AGGAACTCATGGTATTCTGGGATTAATTGCTATCATTCTTGGCTTAATTC
AGGAGAGTGCAGGAACTCATGGTATTCTGGGATTAATTGCTATCATTCTT
GGCTTAATTCAGCCGTTGATGGCCATGGTGCGACCAGCGCCGGATGCTGA
TAGCCGTTGATGGCCATGGTGCGACCAGCGCCGGATGCTGATAGGCGTTT
CATTTTCAATTGGTTTCATAGAAGTTTTGGAATGATTGCGTGGTTATTAG
CCGGCGTTTCATTTTCAATTGGTTTCATAGAAGTTTTGGAATGATTGCGT
GGTTATTAGCCGGTTTAAGCATCATTTATGCTTTCTATGAACATTTGCAA
GAAAGTTACACAGAGATGTTGGTATTCATGATAGTGGTCGTTGTTTTGTT
CATTTTATTGGACATCGTTCTTTGTGCTTCATCGAAAAATTCTGCATCAG
CTGATGGTTTAAGCATCATTTATGCTTTCTATGAACATTTGCAAGAAAGT
TACACAGAGATGTTGGTATTCATGATAGTGGTCGTTGTTTTGTTCATTTT
ATTGGACATCGTTCTTTGTGCTTCATCGAAAAATTCTGCATCAGCTGATG
TGGCGTACAGCGGCACAAATAATATGGTAGATGTCAAACACACTTCGTCA
AATAGCGTAAGTAAAGTTCTGAGGGGGGTTGTAGGGGTTCGAAATATCGT
TTTCCCGTCAAAATTTTGGCTGAATCCCAGATTCCCGAAAATTGAAAAAA
ATGATAACACCGTCACACCGGTTTGTAGAAGTCAAAATACCGGAATATTG
ACAAGAAATAATGCTAATCACCGTTGGCGTACAGCGGCACAAATAATATG
GTAGATGTCAAACACACTTCGTCAAATAGCGTAAGTAAAGTTCTGAGGGG
GGTTGTAGGGGTTCGAAATATCGTTTTCCCGTCAAAATTTTGGCTGAATC
CCAGATTCCCGAAAATTGAAAAAAATGATAACACCGTCACACCGGTTTGT
AGAAGTCAAAATACCGGAATATTGACAAGAAATAATGCTAATCACCGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000366_pilon | genome | sc0000366_pilon:229554..234700 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 703-924:223 |
| Aaloc | 559-699:722 |
| Aaloc | 499-555:1926 |
| Aaloc | 457-495:2175 |
| Aaloc | 397-456:3377 |
| Aaloc | 313-396:3964 |
| Aaloc | 199-312:4558 |
| Aaloc | 1-195:5148 |
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