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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000275_pilon:376898..380948- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_024433 ID=XLOC_024433|Name=XLOC_024433|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4051bp|location=Sequence derived from alignment at sc0000275_pilon:376898..380948- (Clytia hemisphaerica_ch_hm2_pilon)
ATAGGTACACCAAGATCCTTGAAGAAAGTCTCAGTCAATTTGAATAACAT
GTTTGAAGATGTGGACGATGAATGCACTATAGTACCAGATCAATCAACAG
CTTATCAAACTGCTCTTGAAGATCAGTCATCGGCGGTCAGTAATTATATT
TCAGTAAAAATCAAAATAGCTAGTTTTTTGTTCTTTTTATGAAATGGAAA
TACATATTATGTAAAGTGAATTCAGAAAGAACAAAACAGATTCTTTCTAT
AAAATGGTTAATCGGATTAAATTTTGCGAGATTAAATTTCGCGAGTGAAA
ATAATCGCAAAATTTTCTGGATTTAATTTTGCGAATGAGCCTGAAAACAG
CTGAAAAATAGCCGAAAAATATCTATTTTTTTGCCAAAATGGAGACTTTG
GACTGGTTTCTCCACCAAAAATGCTATTTAAAAAATTTTGTAGTGGATTT
AATTTCGCGAGTCAGGAATCTCACGCGTTTTTGCGAGTTTTAATTTCGCG
AAAATGGCGAAAATTCACGAAATCAAAAATTTAATCTCCCGAAAGTTAAT
CCGATTAAAGTAGATAGAAAAATGTTATCTTAAACTGATCTGAAATCAAA
TATATATTTTCTTTCAATCAAAAGATTATTAAATCAGAACACTTTCTGTT
TTGTTTTTTTAGACACTCTACACTGCAATATAGAGATATACCTATTATTG
TATTAACCAAACGAAATTATTTTTCCCGTCCCAGCTTCTTTCCTTGCAAT
CCTATTCTGCATCCCAGAGTATTGGAAAAAAATCAGATTTTTTTGTTAAC
AAGGTAGTGTTTCATTTTTATGTTATGGAATGTATTGTCAACATTTTTTT
GAACCTTAGATGCATTCAAGTCTCATCATACAAGAAGAAGCCAATAAAGG
TATTGACAGTATCAAGCAAATGGAATCACTCAGACATCAAATTCATTCCT
CTTTTTACCCAAACCACAGAGGTAAGATTTGATACAGATATTTTATATGA
TTGAACGATCGGCTAAACTATTGATAAAAACTAGCTGTGCCAGAAGCCTT
AGACTACTTTCAGTTCTTTTCTTATTTTTGCTCAAGAGTGTTCTAGTCTT
GATTTTGAAGAAAAAAAATGTTGCGAATGTCGCTTATTCTGATCTCTGTC
GATTAGCTCATCAAAATCACATAGCATCTGCTAGCAGCTTATTAAATATG
TTCATTTTTATATAGTTCTTTTTCAAAATTTTAGAAATCTCTCCAGGAAA
TCTGTCAGATACATCGAGTGTTGATACGATAGCATTGTTACGATCTACTA
TTTCACTACCATCACCGGAACTCCAGGTTTGATTTTAGTTTATTTTGTTT
GGTCTGCCAAACATAAACCATCTTCGACTGGAAAATGTTTTATTAGTGTA
TGTTCTATGGAGTCTTAAAATGTTCTACTTTTATTGAAAGCTTATTACAT
AAGAAAGATTTTCTGCTTACAATCCATTTTAAACTGACTCTTCTTATGAC
TAAAAATAGATAATCCAAACCCCCTTGTTGAGGTGGGACATCAAGGGATA
GGTGTCACAGTGTCCTCCCCCCTTTAAAAGATGGAAAAGATTTTCAGGCT
TCAAAGCAGTAAAATATAGCATATTTATGCATTTTTTATCAAAACAATGT
AAAAACATGCCTTTCTCTGAGAAATGGCTCAATTTTAATCCTAAAAATGT
CAATTTTTAGGCAAAAACACATGAAATAGGAGACTTTCAGTCTTCGAAAA
TTTTTTCGAGAAGGGGGGGCAAGAGGTTTTTCAAAAATCTAGGGGGGTTT
GAAATGGGGTTGGGGGGCAACCAGAATTTCTCAAAATCTCAACCCACTAT
GGGTGTCAGGAAAGGATCGTTGTCAGTTGGGAGCTTGTGTTGTTTAGGTG
AATTGGGAGGAAGTAATTATTTATTTTTAATAGAAATCCCTTGATAATAA
AGATCTTGGGAAGTATAAAAAATTAGCAAAACGATGAAAAAGAAAAAAAG
TATAAATTAATTTGATCAATAGCACATTTCTGTCACGTTTATAATTATTT
TCCAATTTTATGATCTTCAGCTTGATGAAAATGGTATTCTGATAGCATCT
ATGAACAATTTGAAAAGTTTGTACCACTCACCATCGAGTATCCTGGATTC
TTCACTTGCAGCTGAAAACACCATTTTGAAAGAAAACATTGAAAAAGAGA
GACTTAGGCGAAAGGTTTATTGATATGAATCAACGGATCCTGCACTAATG
TACTTCCCAGTTTTCTCAAAGGTAACGAATCGAGTGGGGATTGAACCCAC
GACCTCTCGCTTGCCGGGCGAAAACTGGGAAGTACATTTAGTGCAGGATC
CGTTGATTCATTACCCATAAGTAATACGCACTTGATTTCACACAGTTTAT
TGATATATTTTATCAATTTGAAATAATTTGTTTCTTTTGGTATACTTCTC
ACACAATATATATTACTTTCCTGCAATATTTTTATATTCGAGTTACTTAC
TACTTTTGCCCAATATTAATAGGAGAATCCTAGAATTTTCGTTGCTTGGG
GTTTGTATTTTCAACTGCAGACTTTTTTTCCAACTTTCCTACCTTATTGC
TTCCAGGCTTTGGATACGCTCTTTTTCTTTTATAAGAACTTAGATTTATA
GGAATATTAAGACTATAAGAAATTGCAAAAAAATGAAAACAATTTCTTTA
GAACAATGCAGAGCCTTGAATTACTTAATTTCAATCAATTTAGGGGTCAA
AGTAGTAAAAATGTGTATAAAGCCTGCTAATTGCTAATTGCTCTAATCGA
TTACTAATTGCTCTTATCCTGTTCTTATTATAGATAAGAATAGGATAAGA
ACAATACGAGGCTCAAAATACCAAAAAATAAGAACAGCCCTGTCTCATTA
GAAATCTACTGCTTCTTATAAAAAATTGCATTTACTTTTAACCGCTTTTC
ACTGCTTTTCATCTTCTTCTATTTTACAGCATTGTGAAGATCAAATTAAG
ATACTTCAACAAAAGGTATATAATTTAAAGCAATAAATTTATCTAAGAAT
CGATGAAAACATTTGAGCTATTTGATATTTTTTTACGAAGTTCGAACAAG
ACAGAATGCACTTTCACTAGAGCAGTTACACTAGAAATGTGCGAGAATTT
CACTTTAGTCCTCATCATCAATCTAGTAGTATTTTATCAAACTGAGGTCA
ATTGGTAGATATACGCGTTTTCACAACATAGTGGACTGTGCTTTGTTTTC
CAGCTTCTGGATAGCCAAGAGCAACTAGCTGTAAGTGTATCGACAGATCG
GAAAAAACAAATCATGATAGAACAATTGGATAATGTAAGTGTTATTCTCT
TTAGATTGGTGCAAACCCATCCAGTATTTGATCCAACATTTGAAAGTTTT
TTTAATGCTGGATGAAAATGTTGGACACACTTGCGTTGCGTCAAAAAATC
TAACTTTTTTAGGAAATTTAGGGGAAAATATGTAAACTTTCCACCCAACA
TTTCGTTCAACAATGGTTTGAAAATGTCGGATCAAATGTTTCATGCATTT
GCGCCGGCCTTTACTTCTAGACAGTTATCTCAAGACGCATCTACATTTTC
ATAAACTAGAATGGATCTCGAATGTTCCTAGCCTGTTAGACGAAAACCAC
TTTTTTATCGCGTTTTAACAAAGAAAAAATTTGGTTTGTGGGAAGGTACT
GGCTAGAGTATTCCGTGTTTTGTGCATAAACTTAAAAATTAGCGCCTGGA
AAAATATGTAAGAGTTGCATTTAAGGGGATCAAATAATAACAATAATAGT
TTCAACTTCGATTCTGTAAACTCTTTCAAACAATAATTAAAAGTTCGAGA
TAACGAGCATGTGCTGTGACAGCAATAGTAAGATGCAACGATACCTCTAA
AAATAGACTTGATTTGATTTTTTTGTTTTTGTAGACTCTGGCAAACGTGG
TGGAGGGATGGAAAAAGAAGGAGAGCTTACGAGATACAGCGTACAAGCGC
GTTTGTTCGGAGAAAGAAACATTAGAATCCACTGTGCAGAGGCAAGAAGA
G Coding sequence (CDS) from alignment at sc0000275_pilon:376898..380948- >XLOC_024433 ID=XLOC_024433|Name=XLOC_024433|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1434bp|location=Sequence derived from alignment at sc0000275_pilon:376898..380948- (Clytia hemisphaerica_ch_hm2_pilon)
ATAGGTACACCAAGATCCTTGAAGAAAGTCTCAGTCAATTTGAATAACAT
GTTTGAAGATGTGGACGATGAATGCACTATAGTACCAGATCAATCAACAG
CTTATCAAACTGCTCTTGAAGATCAGTCATCGGCGATAGGTACACCAAGA
TCCTTGAAGAAAGTCTCAGTCAATTTGAATAACATGTTTGAAGATGTGGA
CGATGAATGCACTATAGTACCAGATCAATCAACAGCTTATCAAACTGCTC
TTGAAGATCAGTCATCGGCGATGCATTCAAGTCTCATCATACAAGAAGAA
GCCAATAAAGGTATTGACAGTATCAAGCAAATGGAATCACTCAGACATCA
AATTCATTCCTCTTTTTACCCAAACCACAGAGATGCATTCAAGTCTCATC
ATACAAGAAGAAGCCAATAAAGGTATTGACAGTATCAAGCAAATGGAATC
ACTCAGACATCAAATTCATTCCTCTTTTTACCCAAACCACAGAGAAATCT
CTCCAGGAAATCTGTCAGATACATCGAGTGTTGATACGATAGCATTGTTA
CGATCTACTATTTCACTACCATCACCGGAACTCCAGAAATCTCTCCAGGA
AATCTGTCAGATACATCGAGTGTTGATACGATAGCATTGTTACGATCTAC
TATTTCACTACCATCACCGGAACTCCAGCTTGATGAAAATGGTATTCTGA
TAGCATCTATGAACAATTTGAAAAGTTTGTACCACTCACCATCGAGTATC
CTGGATTCTTCACTTGCAGCTGAAAACACCATTTTGAAAGAAAACATTGA
AAAAGAGAGACTTAGGCGAAAGCTTGATGAAAATGGTATTCTGATAGCAT
CTATGAACAATTTGAAAAGTTTGTACCACTCACCATCGAGTATCCTGGAT
TCTTCACTTGCAGCTGAAAACACCATTTTGAAAGAAAACATTGAAAAAGA
GAGACTTAGGCGAAAGCATTGTGAAGATCAAATTAAGATACTTCAACAAA
AGCATTGTGAAGATCAAATTAAGATACTTCAACAAAAGCTTCTGGATAGC
CAAGAGCAACTAGCTGTAAGTGTATCGACAGATCGGAAAAAACAAATCAT
GATAGAACAATTGGATAATCTTCTGGATAGCCAAGAGCAACTAGCTGTAA
GTGTATCGACAGATCGGAAAAAACAAATCATGATAGAACAATTGGATAAT
ACTCTGGCAAACGTGGTGGAGGGATGGAAAAAGAAGGAGAGCTTACGAGA
TACAGCGTACAAGCGCGTTTGTTCGGAGAAAGAAACATTAGAATCCACTG
TGCAGAGGCAAGAAGAGACTCTGGCAAACGTGGTGGAGGGATGGAAAAAG
AAGGAGAGCTTACGAGATACAGCGTACAAGCGCGTTTGTTCGGAGAAAGA
AACATTAGAATCCACTGTGCAGAGGCAAGAAGAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000275_pilon | genome | sc0000275_pilon:376898..380948 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 601-717:118 |
| Aaloc | 520-600:799 |
| Aaloc | 484-519:1073 |
| Aaloc | 340-483:1982 |
| Aaloc | 250-339:2816 |
| Aaloc | 136-246:3193 |
| Aaloc | 1-135:4052 |
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