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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000112_pilon:696453..699495- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_024408 ID=XLOC_024408|Name=XLOC_024408|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3043bp|location=Sequence derived from alignment at sc0000112_pilon:696453..699495- (Clytia hemisphaerica_ch_hm2_pilon)
AAGAAATGTCCGCAAGATTGGCAAGACAACGAGTGGTTTAAAGACTTGGG
AAAGGAAAGAGAGATTCTTGATTTAAAGGTTCGATGTAAAAATCATCGCG
ATGGATGCACCTGGCAGAACGAACTTCGAGATCAAGAGGTTTGATACCTT
TCCGTAATGTGACATTCACAACTGCAGTTTAGGTTGAAAAACTAAAAAGG
GGGGAGGGGGGACTTGATTTAAAACTACTGTTTTGAAAAAAAGATTAGGG
TCTCGAAATTGCAGAAATGGTCAAACCTTCAAAGATTTCTCCCAAAAAGC
CTTTTTTCTCACTTTTAACATCCTTACGGCCTTACGGCACATTCTCTCTC
AAATCAAGCCCTACCGTGGGCCTAATGAACACTTTGGAAAGGCTAAAAAC
GTGCCCTTAAAGGGCTGCAGCTTTAAGCACTTACTCCCCCTCCGTAGTTG
TACGTTGTACACTGACTGGAAAAATAATTTTTTCTCCCGTTCGATTTAAT
ACATGCTTTCTTTATAAGAACCAGTAGATTTTGGCACATAATGGGTTGTT
CTTAATTTTTTGAAATTTCAGGCTTAATGTTCTTATTAGGATGTTCTTAA
TATGCTTAGTTTCTTTTCTGTTAAAATCAATTAAAATCAATACTGTCTTA
GTAATTTCTGAATTCTGAGCCTCAGATTGTTCTTAATTTGTTCTTAGCTT
TTGGCCCATTTTCAACCTCATGTTCTTATATAAATTGTTCTTATAAAAAA
AGCGAGCACTGTGATTTTACAATATTTTGTTCTTTTATAGGAGCATTTGA
AGACATGTGATTTCGTAACTATTCAATGTAATCTACAATGTGGAGAGCCC
GTGCTACGCAAAAATGTAAGAAAGAGAACCATTATCATGTCTTCAGAGAC
AGAATTCATCTTTTTCTTATATTATATTATTAGCCAACCAACCATTATTT
TTTATTAAGAACACAGTAAAAACGCAGTTCTCGCCTAACCAGCTAGTATT
ATCTCGGTTCTAAGATGGCCAGATCTATTGATTAGTCAAGGCTACGAGGC
TCCTTAAAATATCAATATTTGTCCTTATGAATGAAATTTTCTACTTCACT
GATTTTAAATGCAACTTTTACTTCTGTGGGCCAATAATTTTCATTGACAA
GAACTGTTAGAGCTTTCGAAACTTATCTACTGATTCTACTGATTATTAGG
TACAGCCCTTAGTTGTGTGCGTTAATCAATTTCATTGACATTGGACCCAA
TAAACTGTGAAGAGAAGAACTTTAAAAGGATATAAATTTTGATTATTATA
TTTAAATTTTAGCTTAAAAATCACTTGGATAAAGACTGCCCATTGATCTC
AACGTGCGAGTACAGCGATTTTGGGTGTCTTTTTAAGGTAATTTTCTGAA
AGTAAATATTTGAGGTGAGACCTTACTCTTGTCTCCCGAATAGACGTGGG
TGGAGTCCGAATAAACAGGGGGATAGGAAAAATTTTTTAAATTCTAATAA
GCGGGGGGGGGATGGAATAAGAGGGCGGGAGGGCGGTAATTTGAAGACAG
AATTTTTTTTTAACTGATATCAATTTCAACAAAAAAAAAGACTTTAACAA
ATGGACACGCAAAATAAGAACCAATACTAACAAAAAGGAAAATTTTACCA
AGTTTAAGGTTTATCTACACTGTAATGAAATATTGAATTATTCGAAATTT
ATTAGCGGGGGGGGTCTTAATAAGAGCGGAAGGGCTATAGATTTTTTTTT
TCTCAACAATTAGCGGGGAGGGGCGTCTATTTGGGAGACAAGAGTAGAAG
GGGCCAAAAAAATCCTTAAACTATTAGTCGAACAATGGAGATTATATTTG
TATATTAAATTATGTGTTATCTTAAAGAAGAACAATTTTTTCAAATGCGT
TTTGGTTTCTGTAAAATCATCAAATCACCCAGTTCGACCAAATAAATGTT
AATGTATTAACTGTTTATCGTTTCGACTTTTCAGGGTACTAGAGACCAAT
TGTACAATCACATGTCAGAAGCGATCAATCAACATTTCTCCCTCGAAATG
AAGCATGAAATTCAAAACGTCAAAAAAGAATTCAGTGATAAATTACAAGA
AAAAGATCTCAGAATTCAAAAGTTAACAAAGGAGTTTGATGCCCAACTGA
AGGAAAGAGATGACGAAATCAAACGACTGAGAAAAGATGTCGAGGACGCT
AAAAAGGATCTCCAACTAGCTTCCAATGAAAACAATGAGAACCACAAAGC
TATCGAAGAAACCAAAAAGGATTTCACCCGAGTTATCGATGAAACCAAAA
TTGAACAACAAAAAGCCATCGAAGAAACAACAAAAGATTTCACCCGAGTT
ATCGATGAAACCAAAATTGAACAACAAAAAGCCATCGAAGAGACCAAAAA
GGACTTCATCGGAGTTGTCAATGAAACCAAAATTGAACAACAAAAAGCTA
TGGAAGAAACCAAAAAGGATTTCACCCGAGTTATCGATGAAACTAAAATT
GAACAACAAAAAGCCATCGCAGAAACCAAAAAGGATTTCAACCGAGCTAT
CGATGAAACTAAAACTGAACAACAAAAAGCCATCGAAGAAACCAAAAAGG
ATGTCACCCGAGTTATCGATGAAACTAATACTGAACAACAAAAAGCCATC
GAAGAAACCAAAAAGGATTTCACCCAAGTTATCGATGAAACTAAAACTGA
ACAACAAAAAGCCATCGAAGAAACCAAAAAGGATTTCAACCGAGCTATCG
ATGAAACTAAAATTGAACAACAAAAAGCCAGCGAAGAAACCAAGAAGGAT
TTCACCCGAGTTACCAATCAAACTAAAACTGAACAACAAAAAGCCATGGA
AGAAATTAAAAATAATTTCACCCGAGTTGTCAATGAAATAAAGACCGAAC
AAGAGAAAGCCATCGAAGAAACCAAAAAGGATTTCAACCGAGTTGTGAAT
CAAACCAAAACTGAACAACAAAAAGCCATTGAAGAAACCAAAAAGGATTT
CACCCGAGTTGTCAATGAAACCAAAACTGAACAACAGAAAGCT Coding sequence (CDS) from alignment at sc0000112_pilon:696453..699495- >XLOC_024408 ID=XLOC_024408|Name=XLOC_024408|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2694bp|location=Sequence derived from alignment at sc0000112_pilon:696453..699495- (Clytia hemisphaerica_ch_hm2_pilon)
AAGAAATGTCCGCAAGATTGGCAAGACAACGAGTGGTTTAAAGACTTGGG
AAAGGAAAGAGAGATTCTTGATTTAAAGGTTCGATGTAAAAATCATCGCG
ATGGATGCACCTGGCAGAACGAACTTCGAGATCAAGAGAAGAAATGTCCG
CAAGATTGGCAAGACAACGAGTGGTTTAAAGACTTGGGAAAGGAAAGAGA
GATTCTTGATTTAAAGGTTCGATGTAAAAATCATCGCGATGGATGCACCT
GGCAGAACGAACTTCGAGATCAAGAGGAGCATTTGAAGACATGTGATTTC
GTAACTATTCAATGTAATCTACAATGTGGAGAGCCCGTGCTACGCAAAAA
TGAGCATTTGAAGACATGTGATTTCGTAACTATTCAATGTAATCTACAAT
GTGGAGAGCCCGTGCTACGCAAAAATCTTAAAAATCACTTGGATAAAGAC
TGCCCATTGATCTCAACGTGCGAGTACAGCGATTTTGGGTGTCTTTTTAA
GCTTAAAAATCACTTGGATAAAGACTGCCCATTGATCTCAACGTGCGAGT
ACAGCGATTTTGGGTGTCTTTTTAAGGGTACTAGAGACCAATTGTACAAT
CACATGTCAGAAGCGATCAATCAACATTTCTCCCTCGAAATGAAGCATGA
AATTCAAAACGTCAAAAAAGAATTCAGTGATAAATTACAAGAAAAAGATC
TCAGAATTCAAAAGTTAACAAAGGAGTTTGATGCCCAACTGAAGGAAAGA
GATGACGAAATCAAACGACTGAGAAAAGATGTCGAGGACGCTAAAAAGGA
TCTCCAACTAGCTTCCAATGAAAACAATGAGAACCACAAAGCTATCGAAG
AAACCAAAAAGGATTTCACCCGAGTTATCGATGAAACCAAAATTGAACAA
CAAAAAGCCATCGAAGAAACAACAAAAGATTTCACCCGAGTTATCGATGA
AACCAAAATTGAACAACAAAAAGCCATCGAAGAGACCAAAAAGGACTTCA
TCGGAGTTGTCAATGAAACCAAAATTGAACAACAAAAAGCTATGGAAGAA
ACCAAAAAGGATTTCACCCGAGTTATCGATGAAACTAAAATTGAACAACA
AAAAGCCATCGCAGAAACCAAAAAGGATTTCAACCGAGCTATCGATGAAA
CTAAAACTGAACAACAAAAAGCCATCGAAGAAACCAAAAAGGATGTCACC
CGAGTTATCGATGAAACTAATACTGAACAACAAAAAGCCATCGAAGAAAC
CAAAAAGGATTTCACCCAAGTTATCGATGAAACTAAAACTGAACAACAAA
AAGCCATCGAAGAAACCAAAAAGGATTTCAACCGAGCTATCGATGAAACT
AAAATTGAACAACAAAAAGCCAGCGAAGAAACCAAGAAGGATTTCACCCG
AGTTACCAATCAAACTAAAACTGAACAACAAAAAGCCATGGAAGAAATTA
AAAATAATTTCACCCGAGTTGTCAATGAAATAAAGACCGAACAAGAGAAA
GCCATCGAAGAAACCAAAAAGGATTTCAACCGAGTTGTGAATCAAACCAA
AACTGAACAACAAAAAGCCATTGAAGAAACCAAAAAGGATTTCACCCGAG
TTGTCAATGAAACCAAAACTGAACAACAGAAAGCTGGTACTAGAGACCAA
TTGTACAATCACATGTCAGAAGCGATCAATCAACATTTCTCCCTCGAAAT
GAAGCATGAAATTCAAAACGTCAAAAAAGAATTCAGTGATAAATTACAAG
AAAAAGATCTCAGAATTCAAAAGTTAACAAAGGAGTTTGATGCCCAACTG
AAGGAAAGAGATGACGAAATCAAACGACTGAGAAAAGATGTCGAGGACGC
TAAAAAGGATCTCCAACTAGCTTCCAATGAAAACAATGAGAACCACAAAG
CTATCGAAGAAACCAAAAAGGATTTCACCCGAGTTATCGATGAAACCAAA
ATTGAACAACAAAAAGCCATCGAAGAAACAACAAAAGATTTCACCCGAGT
TATCGATGAAACCAAAATTGAACAACAAAAAGCCATCGAAGAGACCAAAA
AGGACTTCATCGGAGTTGTCAATGAAACCAAAATTGAACAACAAAAAGCT
ATGGAAGAAACCAAAAAGGATTTCACCCGAGTTATCGATGAAACTAAAAT
TGAACAACAAAAAGCCATCGCAGAAACCAAAAAGGATTTCAACCGAGCTA
TCGATGAAACTAAAACTGAACAACAAAAAGCCATCGAAGAAACCAAAAAG
GATGTCACCCGAGTTATCGATGAAACTAATACTGAACAACAAAAAGCCAT
CGAAGAAACCAAAAAGGATTTCACCCAAGTTATCGATGAAACTAAAACTG
AACAACAAAAAGCCATCGAAGAAACCAAAAAGGATTTCAACCGAGCTATC
GATGAAACTAAAATTGAACAACAAAAAGCCAGCGAAGAAACCAAGAAGGA
TTTCACCCGAGTTACCAATCAAACTAAAACTGAACAACAAAAAGCCATGG
AAGAAATTAAAAATAATTTCACCCGAGTTGTCAATGAAATAAAGACCGAA
CAAGAGAAAGCCATCGAAGAAACCAAAAAGGATTTCAACCGAGTTGTGAA
TCAAACCAAAACTGAACAACAAAAAGCCATTGAAGAAACCAAAAAGGATT
TCACCCGAGTTGTCAATGAAACCAAAACTGAACAACAGAAAGCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000112_pilon | genome | sc0000112_pilon:696453..699495 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 289-1347:1060 |
| Aaloc | 214-288:1732 |
| Aaloc | 139-213:2254 |
| Aaloc | 1-138:3044 |
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