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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000252_pilon:444916..448561- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_024381 ID=XLOC_024381|Name=XLOC_024381|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3646bp|location=Sequence derived from alignment at sc0000252_pilon:444916..448561- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTTATCAAATTGATCATGTCAATGGGGTAAGCTAGTTGTTGTCTTT
TATGTTACACCAATTAAAGAAACAAAGAGTACAGTTTCAGTAGCCAGAGT
TAATGAGCGAGAATAAAAGTGATGGTCAAACAGGGAGGTCAAGCAGTTAG
CACAAGACACTATGCCTACTACCTTATTGGTATATATTTTCGCGTGTTAC
AAATTTTCGCGGGTACTTAATTTCGCGAGTTTTATGGTCAATTTTCGCGA
AATATAATACTGTATAAATTTTTCAAAATTACAAAATCGCAAAATGAAAT
ACACGCGAAAAAATTTTTCTTAGTATTTTGTTAGTATTTTTACATCAAAA
ACGTTGTTCCAAGCAAAATCAGTCTTTTTCTTGCTTTATATATTCCCACT
TTCTGAAAATACCTAGTTTAGTGAATCGCAAAATTTAACAGCCGCGAAAA
TTTTCCAGAAGTCGGCAATCGCGAAATTTAATACACGCGAAACACGTTTT
TTCGAAAACAATTCGCGATTCGCGAAAATTTGTAACACGCGAAAATATAT
ACCAATAAGTTCACTGCTTTTCTGCAAGAAGTTTGTAACACCACCACCCT
TTGTACACTTAGTACAGTTGGTAATAACTGAACTTTGGGTCAAATTTACA
TACACCACCCTTGAAAAATGGCTTTTTGTCCACCATAAAAGCTATAAAAT
CTAATAAAACAAAATCAAATATATTAACTGTTTCAATTTTCAATCTTTCA
ATAGGAAATTACGACATTTTTATTATTTTAGAACATCCAATTTCTATCGT
GTAAAATACGATGTTTTCTTGAAAATTTCCTCATAAAATTTCATTTTTCA
CGCAGTTTTTACTAACATTTTGCAATTTTTTTGCAGTTAGTAATGATTTC
ATAGAATTCACATGGCACACCACCATGCATAGTGTCTAGTACTACAATGA
CCCCCCCCCCGTCTTGGGCCAAAAAATATCCCCTGTTTATTTTGAAACTA
CAAAGAGTTTTTTTCAGCCAATAAATCAACAAATTACATCATTGTCGCAG
AATTGTAAATAGCCGGTGTTGTTGTGAGCTTCTCTGTTTGTTGTTCACGA
TTTACCGATGGGGTAATTATTTTCCAAAACTTGCTGACATCATCATAAAA
TTACCCGATTTTTCAAAGATATATTTTTAAGTCCTCACTGGTGGTATAAT
TACTTGCTTTATTTAGCAGATTCAACCAATGAAGTACAAGCCCGAAGGGC
TAGAATCGAATCTCTATGGTGGGATTTGAAGCCTTCCCATCCCACCAAAG
TTGCGCGCCCTTGAGCGACCCAGCTTTTTTTTCTACAAATAACAGATAGA
AACTAAAATTTTTCCCTAGCTTTCAAAAAATATACCACTCAAAAACAAAG
AAATCACTTAAGCCTATCCGTCTCGCCAAAACACCGCACCGCGCATATTA
TAAAGCTTCACTTTTTCTTGCCTCAGAAAAGATTCGATTCTACCTTAAAG
GGGCAATCCCAGCCACGTAACACGGTTTGCTTTTGTTTTTCTAAAACTCG
ATTACTTTTAGGGTGCATAGGGGAATTTCCAGTTGAGGCGGAGTGATCGA
GATAAAAATATCACGTGACTTTTGACGGGAAAAAAATCAAAACAAACTTA
TGAGAACTGATGGATGGCACAAAAAACTATCTTCCTTTCTCAGAAAAAAG
CTATCATTTTGTTTCAGCTGAAGGCTTCATATAAGATTTTTATAATGACT
CCTAGTTATCTCAAATTATCTAAATCTCCCTCGGCAGTAGCAATTCAATA
TGATTTGATTTATAGGTAAAAAAGAAATGGTTTGAAAAACAAAGAGCACA
GGATAATTTTTATAAGTAGATGTAAAGATGTTATTTTTTATTGAAACATA
CAAGTGTCTGAAATGTTACAAGAAAATCTATGAAAATTTTAGATTATAAA
TTTAGAATCTTTAGTCCAAAAAAGGTTCCTCAAAGCTTTCTAATAATAGC
ACCAAAAACAAAGGCTCCTATGTCTTTTCTTTAAAATTATATAAAGTTAA
GGAAAGAAAATACTTATAAATCTCTGACAGGCTTTGACACGTTTTGATGA
AACATGGAAACCTCGAAACAATGCTTTTGTGGACAATCTATCACATAAAC
ACTACTGAAATTCTATGAAATAAGCAAGAATTAATTGATAAAAAATGAAA
TTGAAATAACTTATTACATTGGAGCACTAAAAGATAACACTACAACAATC
CAAACAAGAAATGACGTCGCGTTAAAACATTCAAAAATATACTCAAAGCC
AAGATGCAATATATTTATTAAATACATGCTCACAGTATCTCTAGTCAGGG
AAAACAATCACACATTCAAAAGTGTCTTTAACTTTAGTCAGGAAAACAAC
CAAAACAATCACACAAGTTTCAAGAGTTTAGAAAACCCACAAAACCTCTG
ACCTCGTGAATATAAGAACCAAGCATTAAAGACTTTGTTTTGGAGTCACT
CGGTAAACAAATCTCATATAACTTGTTCCAGAGATATTGTCCATATAAGA
GTTTATATTTCAAAGCAAAAATAATTCTCGTACTGCCCATTTTTCTCATC
AATTCTTCAACTTGAACCAGTTTCACATCTTAATAGAACGTTAATACTAT
TTTGCCAACCATTTAATGTCCAAAGTTATGGGGATGTAGCGTTTTCTTCA
TGTCAAGCAAATGTCTCTGAAATCTTTTAGTTGGTTGGTTTGGTATTCGG
AAGAGGTAATCCATGGATATCTTTGTAATCAATGATGAAAAACTCTTAAA
ATTACTGATGATTACAGTTGAAGTGTTAGCCTCACATTTCATGTAATTAT
TGGTCGCCAATTAGATGAAAATTGTATGTTTTTTGTTCGTCAGAAAAGAG
TTATAACTTTTAAAAAGCCAAGAGTGGATTTTCGTCCATCTTGTATTTTG
ATCTGAATTATTCGTGTCTTGATTACTCAAAAACATGCGCGTAACATCAA
GGTAAATCCGTGCGATTTTGTCTGAATAACTAAGGCAAATGAAAACAAAA
ACAAACTACGCAATGTGGTGGCGGATTGCCCCTTTAAGTGGATTTAATTT
GGATTCAACGTTTGTTTGAAAAATATTTAAGATTGATCAAACTGATTCTT
TTTCCAGCTCGTTTCAAGTCTCCAAGGAACAATTGACCACAGTGATGCTC
AGCACCCTGTTTTTTATATTGGAGCGCTCACCCTCACGTTAGATAACGTT
CATGGTGTAGATGAAAATCTTAAGGAGACATTGAGGCTACTCGGAACAGA
TGACGAGGACGTGTACCAATCATTCCGATCATGTTACTTATTCAACCAAC
AATCGGTTTTAAAGATCGGAACATTCGTTTGTCTTGCTGATGGAGTGGTT
AGTAAGATAGGCGAATTTATGTTTACAAGGGTAGCCAAATTCGTTCGGTT
ACAAACGTACAATTTCACTGGCATGACGATCAAGGGTTTCAAGGTTTTAC
AACCGACTGGAAATAGTAAAGTTGTTCAGATAAGTGTGGTTCGACGGAAA
GTGATTGTTTACAACGGAAATAACGATTTACTTTTTGTCGATTTTGACCG
ACCAAGTTTTTCTTTTAATTTCAATGCTGTGCCTCCTGTTATAGAG Coding sequence (CDS) from alignment at sc0000252_pilon:444916..448561- >XLOC_024381 ID=XLOC_024381|Name=XLOC_024381|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1038bp|location=Sequence derived from alignment at sc0000252_pilon:444916..448561- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTTATCAAATTGATCATGTCAATGGGATGACTTATCAAATTGATCA
TGTCAATGGGCTCGTTTCAAGTCTCCAAGGAACAATTGACCACAGTGATG
CTCAGCACCCTGTTTTTTATATTGGAGCGCTCACCCTCACGTTAGATAAC
GTTCATGGTGTAGATGAAAATCTTAAGGAGACATTGAGGCTACTCGGAAC
AGATGACGAGGACGTGTACCAATCATTCCGATCATGTTACTTATTCAACC
AACAATCGGTTTTAAAGATCGGAACATTCGTTTGTCTTGCTGATGGAGTG
GTTAGTAAGATAGGCGAATTTATGTTTACAAGGGTAGCCAAATTCGTTCG
GTTACAAACGTACAATTTCACTGGCATGACGATCAAGGGTTTCAAGGTTT
TACAACCGACTGGAAATAGTAAAGTTGTTCAGATAAGTGTGGTTCGACGG
AAAGTGATTGTTTACAACGGAAATAACGATTTACTTTTTGTCGATTTTGA
CCGACCAAGTTTTTCTTTTAATTTCAATGCTGTGCCTCCTGTTATAGAGC
TCGTTTCAAGTCTCCAAGGAACAATTGACCACAGTGATGCTCAGCACCCT
GTTTTTTATATTGGAGCGCTCACCCTCACGTTAGATAACGTTCATGGTGT
AGATGAAAATCTTAAGGAGACATTGAGGCTACTCGGAACAGATGACGAGG
ACGTGTACCAATCATTCCGATCATGTTACTTATTCAACCAACAATCGGTT
TTAAAGATCGGAACATTCGTTTGTCTTGCTGATGGAGTGGTTAGTAAGAT
AGGCGAATTTATGTTTACAAGGGTAGCCAAATTCGTTCGGTTACAAACGT
ACAATTTCACTGGCATGACGATCAAGGGTTTCAAGGTTTTACAACCGACT
GGAAATAGTAAAGTTGTTCAGATAAGTGTGGTTCGACGGAAAGTGATTGT
TTACAACGGAAATAACGATTTACTTTTTGTCGATTTTGACCGACCAAGTT
TTTCTTTTAATTTCAATGCTGTGCCTCCTGTTATAGAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000252_pilon | genome | sc0000252_pilon:444916..448561 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 31-519:490 |
| Aaloc | 1-30:3647 |
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