XLOC_024166 (mRNA) -

Overview
NameXLOC_024166
Unique NameXLOC_024166
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000229_pilon:472466..473123+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024166 ID=XLOC_024166|Name=XLOC_024166|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=658bp|location=Sequence derived from alignment at sc0000229_pilon:472466..473123+ (Clytia hemisphaerica_ch_hm2_pilon)
tTGACAGGTCCACCAGAACGTTCCTCCCACCAAAAGCCTAATGATACTTC TAAATTGCCACCTGATGTTATTAATACTGATGAAGAAATTGAAGTTGGAA ATTTCCACAATTTTGACGAGGAATTGATCATACCTAAGACTAAGAGGCAG TGTTATGGTGTGagcaaagaaaaagaatttaaatgttGGGAGAAGCATAA CATTGACTATTGCTCCCTTTATTCAATGAAGTTTGACACTCTCCCAACAT ATTGCTGCTTTTGCAATGGAGAATTCAGTTCAAGCTTTATATGGTGTAAA TCATGTGGACCTCTCTCGTTTTATTGTCACGATTGTGCAAATAAAGTTCA CCAGAACACTCTATTTCATTCCTTGGTCGAGGTGAAGGTAACAGcactct ttttatttttgttgatttctgaACTAATTATTCTATTTTACTAAGCTTTT TATACAGGGAAGTAAAGCTTTTGTCTCAATTATCCATTTTTCTATTCACT TCAAATACAGAAAGTTTATACATGCTCATTTTACTTTCTAGGTTGATGGA AGTATTGAGTCATTTCAGGTCAAGTCCATTTTGCAAAGCGAGCATACACG AAAGTGCTTATCAGCTTATTCAAGAATATTGACTGTCATCTCAGAAACAG GTTTATAG

Coding sequence (CDS) from alignment at sc0000229_pilon:472466..473123+

>XLOC_024166 ID=XLOC_024166|Name=XLOC_024166|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1008bp|location=Sequence derived from alignment at sc0000229_pilon:472466..473123+ (Clytia hemisphaerica_ch_hm2_pilon)
tTGACAGGTCCACCAGAACGTTCCTCCCACCAAAAGCCTAATGATACTTC
TAAATTGCCACCTGATGTTATTAATACTGATGAAGAAATTGAAGTTGGAA
ATTTCCACAATTTTGACGAGGAATTGATCATACCTAAGACTAAGAGGCAG
TGTTATGGTGTGagcaaagaaaaagaatttaaatgttGGGAGAAGCATAA
CATTGACTATTGCTCCCTTTATTCAATGAAGTTTGACACTCTCCCAACAT
ATTGCTGCTTTTGCAATGGAGAATTCAGTTCAAGCTTTATATGGTGTAAA
TCATGTGGACCTCTCTCGTTTTATTGTCACGATTGTGCAAATAAAGTTCA
CCAGAACACTCTATTTCATTCCTTGGTCGAGGTGAAGtTGACAGGTCCAC
CAGAACGTTCCTCCCACCAAAAGCCTAATGATACTTCTAAATTGCCACCT
GATGTTATTAATACTGATGAAGAAATTGAAGTTGGAAATTTCCACAATTT
TGACGAGGAATTGATCATACCTAAGACTAAGAGGCAGTGTTATGGTGTGa
gcaaagaaaaagaatttaaatgttGGGAGAAGCATAACATTGACTATTGC
TCCCTTTATTCAATGAAGTTTGACACTCTCCCAACATATTGCTGCTTTTG
CAATGGAGAATTCAGTTCAAGCTTTATATGGTGTAAATCATGTGGACCTC
TCTCGTTTTATTGTCACGATTGTGCAAATAAAGTTCACCAGAACACTCTA
TTTCATTCCTTGGTCGAGGTGAAGGTTGATGGAAGTATTGAGTCATTTCA
GGTCAAGTCCATTTTGCAAAGCGAGCATACACGAAAGTGCTTATCAGCTT
ATTCAAGAATATTGACTGTCATCTCAGAAACAGGTTTATAGGTTGATGGA
AGTATTGAGTCATTTCAGGTCAAGTCCATTTTGCAAAGCGAGCATACACG
AAAGTGCTTATCAGCTTATTCAAGAATATTGACTGTCATCTCAGAAACAG
GTTTATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_024166XLOC_024166-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000229_pilongenomesc0000229_pilon:472466..473123 +
Properties
Property NameValue
Aaloc391-507:542
Aaloc4-390:1