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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:1633002..1637589+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_024135 ID=XLOC_024135|Name=XLOC_024135|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4588bp|location=Sequence derived from alignment at sc0000049_pilon:1633002..1637589+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGAAATTGGACTCGACAAACATTTGCGATCCCATGTCTCTCATTCATCT
TTTGTGTACTGAATACAACCAATCTAAATTCAACATGAAAGATTACGTCA
GTCATCAAGACAATGAGGGGAATACGCCGCTGCATTATGGGTGCCAACGT
GGTGCGACTATCTCATGCATGCAGttgaaaaaggtatttttgagaaattg
tgGAGTAGGTAGGCCGGTTGGCGGACGGGGttattcaacaaaattttaag
aatgtgTTCGTCAATTTTTTGCGTAAAattccgtctcagacgaaaaatgt
tgttttgactACTGGTGATGATGCCTTCTGTCATTGCTCTATCAGTGGAT
CAGAACCTTTTCGCACGTTGGTCTTGACTTTTATCTTCGTGTCCCTTACA
AATGGAAGACAACCCCCGTCCCCTTGTTTTAGctagtttatgtatgtgtg
ttttccaGCGACTGAGACGGTTAGGGTTCGACTTGGCTAGATCATGACAA
CTGAGGACGACGCTTAATCAGcatttttaccgtcctcgattttgcgggtc
aaaagctttaagtggacacTAGGCTAGTCAAAACTGAGTTtcattccaaa
tcgcttcagtcaatCTGCTGTCCTCGAAAAGTGCAAATACTTAAACTCGC
TAATATCTGCCACCTGGACAGCACATGggaaattttgtttgctttttctt
AGCTTGGTGCAGACGACAAGCTGACAGATAAGAATGGAAACACGCCTTTG
GCTATTGCATTGAAAAACAAGCATCATGGGTAAGAATCAGTCGGAgatca
attttctaaaattgttttctaTTATTAGTTTAGTATCGCCCGATTCAAAA
GTCAGTTTGAtaccatttttgagaaaaagtcaCCCTTGCTTCTAGAACGA
AAGATAAAGCGGGGGTTCGTTTTATAAGCAAAGCTGATATTTCCAGTGCC
GGGTATGTCATGCCTAGCTTCCCAGTTAGCCTGTAGACAATATTGTGATG
CAACACGACGGCTTCAGAAAGCCCGTTCTTCATCGAGAAATATATTCCGA
TACTTAACTTCGCTAACAAGAGTGGCTTGACTATTATTTTCTTAGCACTG
CTATGATGATGCTTCAAGAGGGTGCTGACCCACAATGCAATATATACAAA
CGCGTAACCAAGGAACAGATAAAACAATACGAAGAAGGCATATCATCCAA
CAAATATAAATGGGATTATTCGGCTGAAAAACCTGAAGACTTTTTAGTTT
CtgcttttgttttcgttttgatTCAAGACTGGAAAGATTTGGCTTACATC
ATGTTGGAAGTGTCAAAATTGCCAATGTTCGATGCTATTCAGGTAAACCA
TTGTGTACACATTTTAGCGGGCGCTGTTCTATTCACTGATCTCTAACTAt
ttgactggatcgggcttcCCATTTTTAAAAGAAGCATGTCAAGTTTTAGA
ACTGGATAGTCCGCTATCTTGTGTTGAATTCTATTTTGTTCGAACTGAGC
AAGCAAGGAAAGAAGGCCATATTAAACGCTAATTGTAATTCTCAATACTC
GAAATGGGCTTTTctagaaatagtccgtgccccccccctgttgaggatat
cggatatccagggggttaacgatttttgttcaaaagtagatatccagggg
gttaaatatctacaagggagtagatatccagggggtaaagtgtctttata
agtaaaaaatacgatatccaggggtaagcatctttataagaatagatatc
caggggggtatttactaataaagtatacttcgaaaaatcaatatcatcAA
CAGTGggggaaaagttttttctggaaaagcccattgtgaTATATTGGGGG
CTACGTTGGCTCCTTTGCTGTGATAGTTGATTCCCCgtttaaaatgaaaa
ctttgCTTTGACTGTTTTTAATAGGCTGGTATTTCGGAAGAGAAATTACA
CTTGATTTGGACGCTCCTTGCAAAGCATCGAGAATACAAGGCTACGGGTG
TAGACGAGGAACGAAGAAACCTTTTACATCTGTTGTGTATACACGTCTCA
GATAAAAGTCTAGCTTTGGATGACGAGGTGAATACCTATATCTATATTGA
CGATACCTTTAAAGGCTTAAAGGGAGGGAGGAAACTTCTACGGGGAAAGC
TTTCGTCAGGGAAatgtttgtcattttttgtaaaaatcttttaCGCATGA
TCAGAAAATGTTACCGTCCGGAAAACTTTATCAGAGAACGGAACgaatga
aatatttccatattgtacgttGAAATTTTAATAGGGGTGGGTGTCTACTT
GGTGCGCCGCAACAACTATAGCAACGTTGTACAAaatattatttcttttt
ctcGTAATTTACCCTTCTTGGCCCCGGTCCAGTTGAgatgaccaaaattt
caatcagGAGTTATATAGATAAATTGAAAGAAGAGAATTAGAGAGTGgac
taattcaaatttttgaaatgtattttctttcagGACTTTAGCGGCTTCTC
TTTCAACGAAGAAACAGGTTTATTGGAGAAGGAGATACCTAATAGAAAGA
AAACATGGCTTGATGTATGTATATTATCAAAAAATCGTCATTAAGTCTTT
ATTTTAGTCGCCAAAGCaaaaaaaCCGTATATTTTGTCCTTCATTTCTCT
ATTGCTCTCTACTTCATTGTCACCATTATTTTGACTTAGTCATCTAGTCA
AAGGTTAAAAATGttgtcataattttttttcggaaataaGGCTTTGggac
atccctgtctcacagtcccggtggaaTTCCATAAAagttcctattgaaat
cccaatttgGATCGAGATTCTTTTGTTCCAAGGTTGAAAaatccaatggg
gatggttttggagtgcaatttttaaacattgaatgccgagtggggatgaa
atcaaagtcaatttcccagtggggctgaatttccagggtattttctcacc
ggggacgaaatctttGCCAAATATTCCAGTGGGGGCTTGAGTCTcagcag
gtctgtgacacaggcgTGTTTTGGGGGTTGTATGTCTACTGAGACAGATA
AAGTCTAACACTTATCGAGAATTAAATTTTCCAAACAGGTTGCCAAATAC
TTAATCAATTGTGGTATCAATATCAAATCTGCTGACTCAACGTCATCCTT
ACCCATTCATTACGCTGTTGAAAACAATTTCCCGTCAGCTGCTCTCCTGG
TTAAACTAGCACCCAGTCTGCTCAATGTTCAAGATGGACGTGGACGAACG
CCCATCGTTCGGGCGTTATTAAATGGAAATGTAAAAAGTTCTTATCCTAT
CTCTCGGTATGCTCTTTTTTACTCTAGACGAGGAAAACTTCCTTGATTAC
TTTGCTGTATCTCCTATTCTTGCAAATTGCTAACTTTGAACTTTTCAAGG
CATTTTTAATCTGCTGTCGTTAACGTTCcatcacagaaaaaaattgatat
ctcTTGGCTATGCATTTAGAAGTTTTGAGACCTCTTATGGTTTTGAAACA
TCCATGGCTAAACGAAAACAAATGTTATTAAATTATAACTTATTTCCAAA
TTCGAGATATGACCAATTTCTAAACACTGTTCCAATTgctagtgtgaagg
tttcgatcacagaaacattgcaccgcaatggactgtgttcgaatcccaag
cacttccaggcaggctgataatcgaagtatgGGTTGACGCAAgtgagctt
agtaaagctcaaattgcagatgaaGAACGATAAACTCCCcacacgatttt
ttttttaaacatccaaattttttgaagccttcggagtTCTTCGGTACTTT
TGAGATataagccttaaaaatgttcttaacatgttcctattttcaccatt
ttgtgggtattttgtCTGTTtacctaagaaatcgggtgttttggaTTCCc
cgaagccttgaaatgttcttaacatgttcttgacattttggccatcgaag
ccttatgttcttattaaagTTTGTTCTTCTAAAATACAATGTGTGCACGG
TTCTTTAAGTACGTTACTTGAATATCTCAACTCCGACAACCAGATATATT
AAACGTCAGATAATTCCttatcacagatatcttatataaaacactagata
gagctactccgcccctatttgaatcaaaataattcgccatctttgataag
tagaccatagttcggtgccggcaatttgatcCATCAAGCTTATCTTTCGC
CTCGTCGCTTCGCGCCATTCAGGtttttttgcttggttgaagaaattgcc
ggtaccgaactgtgaCCTAGGGTGACattactttcagcaaagatggcaca
ttattttgctttacgtaccgttgcttgggaaatacggAGTAACTCTATCT
AGTgctttatataagatatctatgtTCCTTATACTTTAGGTTCCTGATTG
AAGATCAGAAAGCTATTTTGAACGTGGCTTTCAGAAATGAAAAGGGTGAG
GCGACAACGTTGATCAATGAATGTGTCTTAAAACAAGACACAGTATTATA
CGTGGGAAATCATGATAAGGAAATCGGTTGTTTGGAATATATTTTAGAAC
ATGGTGCTGACGTTGATTTTGTTGCCGGTGACGCCGAT Coding sequence (CDS) from alignment at sc0000049_pilon:1633002..1637589+ >XLOC_024135 ID=XLOC_024135|Name=XLOC_024135|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2316bp|location=Sequence derived from alignment at sc0000049_pilon:1633002..1637589+ (Clytia hemisphaerica_ch_hm2_pilon)
AAGAAATTGGACTCGACAAACATTTGCGATCCCATGTCTCTCATTCATCT
TTTGTGTACTGAATACAACCAATCTAAATTCAACATGAAAGATTACGTCA
GTCATCAAGACAATGAGGGGAATACGCCGCTGCATTATGGGTGCCAACGT
GGTGCGACTATCTCATGCATGCAGttgaaaaagAAGAAATTGGACTCGAC
AAACATTTGCGATCCCATGTCTCTCATTCATCTTTTGTGTACTGAATACA
ACCAATCTAAATTCAACATGAAAGATTACGTCAGTCATCAAGACAATGAG
GGGAATACGCCGCTGCATTATGGGTGCCAACGTGGTGCGACTATCTCATG
CATGCAGttgaaaaagCTTGGTGCAGACGACAAGCTGACAGATAAGAATG
GAAACACGCCTTTGGCTATTGCATTGAAAAACAAGCATCATGGCTTGGTG
CAGACGACAAGCTGACAGATAAGAATGGAAACACGCCTTTGGCTATTGCA
TTGAAAAACAAGCATCATGGCACTGCTATGATGATGCTTCAAGAGGGTGC
TGACCCACAATGCAATATATACAAACGCGTAACCAAGGAACAGATAAAAC
AATACGAAGAAGGCATATCATCCAACAAATATAAATGGGATTATTCGGCT
GAAAAACCTGAAGACTTTTTAGTTTCtgcttttgttttcgttttgatTCA
AGACTGGAAAGATTTGGCTTACATCATGTTGGAAGTGTCAAAATTGCCAA
TGTTCGATGCTATTCAGCACTGCTATGATGATGCTTCAAGAGGGTGCTGA
CCCACAATGCAATATATACAAACGCGTAACCAAGGAACAGATAAAACAAT
ACGAAGAAGGCATATCATCCAACAAATATAAATGGGATTATTCGGCTGAA
AAACCTGAAGACTTTTTAGTTTCtgcttttgttttcgttttgatTCAAGA
CTGGAAAGATTTGGCTTACATCATGTTGGAAGTGTCAAAATTGCCAATGT
TCGATGCTATTCAGGCTGGTATTTCGGAAGAGAAATTACACTTGATTTGG
ACGCTCCTTGCAAAGCATCGAGAATACAAGGCTACGGGTGTAGACGAGGA
ACGAAGAAACCTTTTACATCTGTTGTGTATACACGTCTCAGATAAAAGTC
TAGCTTTGGATGACGAGGCTGGTATTTCGGAAGAGAAATTACACTTGATT
TGGACGCTCCTTGCAAAGCATCGAGAATACAAGGCTACGGGTGTAGACGA
GGAACGAAGAAACCTTTTACATCTGTTGTGTATACACGTCTCAGATAAAA
GTCTAGCTTTGGATGACGAGGACTTTAGCGGCTTCTCTTTCAACGAAGAA
ACAGGTTTATTGGAGAAGGAGATACCTAATAGAAAGAAAACATGGCTTGA
TGACTTTAGCGGCTTCTCTTTCAACGAAGAAACAGGTTTATTGGAGAAGG
AGATACCTAATAGAAAGAAAACATGGCTTGATGTTGCCAAATACTTAATC
AATTGTGGTATCAATATCAAATCTGCTGACTCAACGTCATCCTTACCCAT
TCATTACGCTGTTGAAAACAATTTCCCGTCAGCTGCTCTCCTGGTTAAAC
TAGCACCCAGTCTGCTCAATGTTCAAGATGGACGTGGACGAACGCCCATC
GTTCGGGCGTTATTAAATGGAAATGTAAAAAGTTCTTATCCTATCTCTCG
GTTGCCAAATACTTAATCAATTGTGGTATCAATATCAAATCTGCTGACTC
AACGTCATCCTTACCCATTCATTACGCTGTTGAAAACAATTTCCCGTCAG
CTGCTCTCCTGGTTAAACTAGCACCCAGTCTGCTCAATGTTCAAGATGGA
CGTGGACGAACGCCCATCGTTCGGGCGTTATTAAATGGAAATGTAAAAAG
TTCTTATCCTATCTCTCGGTTCCTGATTGAAGATCAGAAAGCTATTTTGA
ACGTGGCTTTCAGAAATGAAAAGGGTGAGGCGACAACGTTGATCAATGAA
TGTGTCTTAAAACAAGACACAGTATTATACGTGGGAAATCATGATAAGGA
AATCGGTTGTTTGGAATATATTTTAGAACATGGTGCTGACGTTGATTTTG
TTGCCGGTGACGCCGATGTTCCTGATTGAAGATCAGAAAGCTATTTTGAA
CGTGGCTTTCAGAAATGAAAAGGGTGAGGCGACAACGTTGATCAATGAAT
GTGTCTTAAAACAAGACACAGTATTATACGTGGGAAATCATGATAAGGAA
ATCGGTTGTTTGGAATATATTTTAGAACATGGTGCTGACGTTGATTTTGT
TGCCGGTGACGCCGAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:1633002..1637589 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 961-1158:4391 |
| Aaloc | 742-957:3089 |
| Aaloc | 661-741:2484 |
| Aaloc | 508-660:1925 |
| Aaloc | 262-507:1097 |
| Aaloc | 184-258:703 |
| Aaloc | 1-183:1 |
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