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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000390_pilon:90042..96249- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_024105 ID=XLOC_024105|Name=XLOC_024105|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6208bp|location=Sequence derived from alignment at sc0000390_pilon:90042..96249- (Clytia hemisphaerica_ch_hm2_pilon)
CTTTTAGCATTATCATCCGGCTACACTGTTTTGCAGATTAAGGAGGAGGC
AAAAACATCGCTTGTCTATGTAATTCCATTGAATTCTGATCTTGACAAAA
CCCCACTAGATGTCAATAATTTTCAAAACCATGATGTGCAATTAGTCAAA
TGCCACACCTGTCAAAAAGAAGTTCCACTTATTTCTTTTCAAAACCATAA
AAGCAACTGCAAAACAACTGGTACAATTTTATTCTATATATTATTTACCA
ATTAAAAGTATTATTTTCTTTCACTTGCCTTCTATATCTGTTGCTCTTGC
CTTAATTCTTTTTATGGTAGAGTTTAAAAACATGGGTAATAGGTCCTAAT
TCTCACAAGACCAGACTTACTACAGTATAGTAGTGAAACAAAAAGATCTC
TTTACCAACACTATAAATAGATGGGTTTTACAGGGAACATGTTAGCAGAA
CTTTTTGTATTTGTTGTCTAGATAAATCATTCTCTCAAAAAAGGCTGTGA
TGTGATATACTTTTTGACCTTGGTTTTAGAATTTGAAGAAAACAAAGAAG
AATCCGTTGCTGACACAATCCAAAAATTACAAATTTTATTCCCCCAACAT
GATAAGGAATATTTAAACACAGTATTTTCTGGGTCCATACATATCAATGA
AGCTGTTGAGAAAATATTAAAGGAAATGAACAATTTGGTGAGTCATTTTT
TAAAAGGGTTGTAATGTAATCATTAAATCGATTTGATTGGGCCCCATAGT
GTCCTGGGTCAGCTCCCCCCAGGAAAAATTTATTCCCAGATTTGTGGGTG
CAATGTGAAACGTTCGCTATTTAAGCAGGGGAGGGGTCTGCGTCCATACT
CTCAGGTCTTTAATAGACGGATGTAATTTGAGTATTGATATCAGATATGG
GACTGACCAGGGTTACAAATTAGTGGGCAAAAAATTTCAGATTTTGAGAA
CATCATAAGAATATTTTGAGCCAGAAAATTTTGAAAAATCAAGCACAATT
GAGCTTAAGCCAAAATAAACTGGTTCCTATTTTAAAAAGTGTGTATATTT
GAAAAAGCTAATCAAGATTAAGAATTTTACAAAAGTTACGGCCAAGGGCA
GAATAGGCCGGAAATTTTCGTCGTTTGATATATAACAGTCGATAGTGCGT
TACGACGCGCTGGTCTCAACTTCAATATATTATCTACCGGGTGACCCACG
AAAAAAAACAACCAGGGTTTCAGTGAAAAGTACCCTTGATATGATATTAA
TATTATCAAAAATTACTTTTTCATCGTAAATAGATACATTAACTTAAATT
TTGAGCTGTCAATTTTTTTATTTCTGACAAGTAGTCCTCCAGATATAGAG
GTTTGAAAGTCACTTAAAAAGTTATCAAAAAACGTAATAAAAACAGGGCT
TCAAATTTGACCATTTTTAACAAAGAAAATAAACATTTTATGACAATGAC
TTTTGTTGCCGAATTAGTAATTTTATTGCTTCTTTTTTATAAACAATTTT
CAAAAAAGGTTTATAGGGTGAAAAACCAAAGAACAATTTTAGAAAAAAAT
TCAGCAATTTTAGAAAAAAAAATTTCAAAGAAAGAGTTACAAAATGCTTA
TTTAGATACCCAGTTTTTGACGTTTTTTGATGATTTTTTAAAGTGATTTT
TAACTTCAAACCTCCATATCTCGAAAACTCCTTGTCAAAAGTAAAGAGGT
GGTGGCTCAAAATATAAGTTTGAGTATCCTCTTTGGGATGAAAAATTTTT
CAACAAAATAATATCATATCAAGCGTACTTTGCACCGAAACCCTGGTACT
TTTTCGTGGATCACCCGGTAGATAATTTGTAGACCCAATTGTAAAATTTA
TAAGCTAATCTTAATGAAATTTTCAGCCAAATCAGACCATTTTTATGTCT
CCAGGCTGACCCCAAAGTTTTTTGCAACACTTTGGTGAAAACTCGTCCCC
AGGCCCAGAAATCAAATGTTTAGAAATAAAATGAAGAAATTACCACCAAG
TATTCACCCAAGGAATAAGCACAGGAAAAAATCGTTAAATCACACTTGTG
TGAAAACTGATTTCCCACAGTGGGATTCGGTTCGTTTTTCACACGGGTGT
GAAAAGGTAAATGACACCCTTAATGTTTCCACCATATTGAATTGAGTATC
AGACTAAAACACCTCAAATTTAAGAAGAATTAAGTCAGATTGTCATTGCA
GATTGAGCGTTTAGTTTGATAATTAATTCGACATGAGACAAACACATTGG
GTGTTAATTACCTTTTCCCACCCGTGTGAAAAACGAACCGAATCACACTG
TGGGAGATCAGTTTTCACACGAGTGTGATTTGACGATTTTTTCCTGTGAA
GTGTGCCAAATTTCAGCCAAATCTGACCATCTTTAAGTCTCCACACGAAA
GTTAAAATTTGGCTTTATTATTTATTATGATCAATGTAATCTTGAATGAA
TTTCTGATCAGATGCCAAATTTTCAGGTCTCTATCTGATCTGGAAGTCAA
GTTATGGGGCTCCAAAGTTGAGTGTTAAAAATGGATATTTTTGAACATTC
TGATCTAAATTCAGGGTTAAAACCAGTTTTTTGTGTGTTAACCTTAGAGA
CATTATATTCTTAAGAGAAATTACTCAAAAGTATGTATAAATGTTTAAAA
ACAAGAAAAAACTCAAATTTTCCATCAAACTTCTCATCACGAATTTGTTT
AAATTAGCCACAAATGTCAAAATATCTCTCTGCTAATTGTCACATATCAA
ACCATATGAAAACTACAGACACTAACCATTCTAGAAATGCTGGAATTTTG
GTGTGACGCTTAGCGGTTTAGAAGTTTAAATTTTAAAAATTGAAGTCTAC
AATATGTCTAACTCATGTAATGTGACCCTACAGCTTTTTGAAAGCCTTTA
CAATACAAAAAGTGTAAGAAGTGTCTTGTTCCTCTCCTTCTCCTTTTTCC
AAAGTTTTTCCATTTGGGCCCAGTGTGCACCAGGCTCTCCTAAAGTATTT
GGGACAAATACAGACAGACATACAGACATTTCCAGATTCCTAGCTCAACT
TCTGTACATTTCGGATTTTAAGAAAATCCCTCATGGTGTTCTAGTTGAGA
TTTTGGTACTGACTCTGGAAGTCAGTTTATAATTTTGTGTTTTTCTTCTC
TACAGGAACACGGTAACAAAAACCTTCTCGAGGAAACAGATATTCCTGGA
GGTAATAATATATTTTTTATATTTCAGATGGGCCCAAAATAACAAAACTT
AAAATTTTATATGTGGTCAAGAAAACCTAAAATAATGATATTCCCAAAAT
TTTCATCATCGTAATCGGGAAAGATGAACGGATGAGTTCGATGTTAAAAT
ACTAAATTTTGTGTATATTTACGTAGCTTCACCTCTAGCTCCTGGGACGG
GGATGATGGAGCGTGGGTTACTAAAATCCTCAGAGATATGTTGAGATATT
TTGAAAACCCGTCTCAGAATAATGAAAGTCTTGTAATTAATTAAAATTTT
TGTTCCTATCAATTTAAGTAAAAAACTCTCTGCCCTCTAAAAGAGGTTAA
CTCTTCTAGGTGGGTTCCAATCTCAGGAATCTATTATATAACTAAATTAC
ATCAAGTAAGTTCGTTTAAAATTTAAAATGGTTTTTAAAGTGCGCAAATT
CAAATAAAAAAGATGCAATTCTTTAACCCTATTAGCCCCAAGCTTTTTTT
GCTTCTGTAGCCCCAAGGGGAGGGTAGAATCTACCACGCTCAATATTTTT
TGATTCAGAAGTGCTATGATCATAAAAATTGGTACAGATTTTCTCTATCA
TGAATGGAAATTCATAGAAGAAAAAAATTAATTACATCATCCAAAGTATG
ATGACGTCATCACAAAATTTCCACCTGTCGCAAAATAGGGTAAAAAGTAT
GGTTTACAAAAAACAACCTCACGGTCGAACGGAAAAAGATATTTAGGATC
TGTTTTCAGATTCTGAAAGGTAAAAGATTGCTTTTTAACACAATTGCCGG
TTTTTATTTCTGAGCAAGATTTACTGTTAAATAAAAATCTATGCTGAAAA
TGAGTAAAATTTCCGAAAACTAATGACATCATCATTTATAAATTTTTTTT
CTAAAATTTCTAGAATTAAATTGTCAATATCTATCATCTCTGAACATTTG
AATTTGATTGGATAGATAGATTCTACCCTCTCCCCTTGGGTAAATAGGGT
TAAAGACCGTTGTTATAGTACGTTCACTCTAACTTGGATAATCGTTAACA
ACTTCTAAGTACAAACCTTTTCTTTTCATCATAAAAAACAACGAAAATAA
AGTGTTTTGTAAAAAAGACATCCAAGTGAACGCACTATAAGGACTGGCTG
AAACCGTTTTATATTCAATGTTGCTGACAATAAAAAATAAGCAGTGGCAC
GAAGGTTTTAACTTGTTGTTCTAACATCTTAACTTTTTACACGTTTAGGT
TCTGGTAATAATGATCTCGTTGAAAGTGATAGCAGCAACAGTGACCATGA
CAGCCTACCAGATAGTGGTGTTGGTAAGAAAATAAAAGACCAAAAGTTGA
AGTGGGAATCATTCAAAAGGAGGAACTTGAAAAAAGGGCATGTTCTCGTT
AAAATAAACCGTGATACAATTCTTTTATCGACAATGACTTTGTTCAAGCG
TGGAGATATCAAAAACATTTCTATTCCACCAGAAGTTAAATTTCAAAATG
AAGATGGCATCGACGCTACCGGCCCGAGAAAGGAGTACTTTTTTCATACG
ATTAAATCTTTTCTCAGCGGAGAAAAAAACATTGTGTTGTTTGAAGGCCG
TGAAGACCGTAAAGTTCCAGTACATGACACTGATCTGTTGGCTTCAGATT
TCTTTTATTATGCTGGGAAATTTGTGGCAATGGCTTTCTTCCATGGGGAA
ATTGGAATATGGAGTATTTCGCCTTGCATTCAAGAATACATCTTGTCTGG
ATCCAAAACAGCAGCAATTGCACTTGTAGAAGCGAAAGATGTGGCTGACT
CGGAAACCCAATCTATTTTGGAAAGTGTAAGTTCCAGTGATAGTTTTCCT
TTTTTTATTTTTGGGTTCTCCTTGGACTGTACAATTCAATATTACTTTTT
TAATACATAGCTGCATCCCCTAGCTTTTAAGGGTTCGGGATTTCTAAATT
TTGGAACTAAGAGGCCGTTTATATGGATCGATCTCGGAGCGGTTAGACTA
GAGTCTTCTTTTGGCTGAACTTTGCTTTTTGATGATTTTGATGACGCTGA
GTTCAGTAATGTAGACTAGGAGCAATTGGCATTTCTAACGCAAAGAAAAT
TTAAAGTGCACCGCTATCGATTCCAATTTCCATACCAAGCGATTTTCTCA
ATTGCGGTGCAGGAACTTCAAGATTTTATTTTTTCCTGTGAAAGGCCTGG
ATCGATTGATGGATTTTGCCAACAAGCCGAACAAGCTAGAGCAAAAAGCT
GTCAATATACACTGGGCCAATTAATCGCGTCATCCAGTCTATCAAAAAGC
CTTAAGTGACCTACGGGCTACGGAGCCGTTTGAGTTTGGCTTTTCGGAAT
CCAATCTCGGTTCGGTGCAAATGACCGTGATCAGTACAGCCTCAGAGGGA
AACCCGAAACGCAGTTTCGCGTATGAGATTGCTAAAATGAACTCAGTACG
CTCCCGAACCGAGATGCATGTAAACAGGCTCAGAAAAGATTTATCGAGAT
GAGCATTTAGAGCTGTTTAGAGGCAATAGGCATTGAGAGTTTTTTATTTG
ATAGGGAGGTTACTGATTTATTTTTGTGCATTTGTTTTCGAAATTAGTAT
GTCCTATCAATACACGAGTTTTGTCCAAGCATTGCAACTGTCATGGCGGT
GCGAAGACCTCTTATTTTGAAGAATAATCATTATTGGTATCTCTTAATTT
TGATGCTTTTAACCCAAAACTTTAGGATCCTTAAGTTGAAATCCTGAATC
CTAAAGTTCAGTCTTACCAATAATGTAGCAAGAATTTAATTTAATCACTT
CAATTTTTTTCAGATAAAGAAAGCTTGCACGGAAGAAGACTTTGCTGATC
TTAATGGGGAAGATGGTATTTCATCACTGCTAAATGCTGCTGGTTTTGTC
AATAAAATGTTGGGTACAAAAACCAAGGATCAAGCGTACCAGGAAATTTT
GTTCTATGAGGTGATAACCAAAAGACGCGAAGAACTAGACGATTTCAGGA
GAGGAATG Coding sequence (CDS) from alignment at sc0000390_pilon:90042..96249- >XLOC_024105 ID=XLOC_024105|Name=XLOC_024105|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2394bp|location=Sequence derived from alignment at sc0000390_pilon:90042..96249- (Clytia hemisphaerica_ch_hm2_pilon)
CTTTTAGCATTATCATCCGGCTACACTGTTTTGCAGATTAAGGAGGAGGC
AAAAACATCGCTTGTCTATGTAATTCCATTGAATTCTGATCTTGACAAAA
CCCCACTAGATGTCAATAATTTTCAAAACCATGATGTGCAATTAGTCAAA
TGCCACACCTGTCAAAAAGAAGTTCCACTTATTTCTTTTCAAAACCATAA
AAGCAACTGCAAAACAACTGCTTTTAGCATTATCATCCGGCTACACTGTT
TTGCAGATTAAGGAGGAGGCAAAAACATCGCTTGTCTATGTAATTCCATT
GAATTCTGATCTTGACAAAACCCCACTAGATGTCAATAATTTTCAAAACC
ATGATGTGCAATTAGTCAAATGCCACACCTGTCAAAAAGAAGTTCCACTT
ATTTCTTTTCAAAACCATAAAAGCAACTGCAAAACAACTGAATTTGAAGA
AAACAAAGAAGAATCCGTTGCTGACACAATCCAAAAATTACAAATTTTAT
TCCCCCAACATGATAAGGAATATTTAAACACAGTATTTTCTGGGTCCATA
CATATCAATGAAGCTGTTGAGAAAATATTAAAGGAAATGAACAATTTGAA
TTTGAAGAAAACAAAGAAGAATCCGTTGCTGACACAATCCAAAAATTACA
AATTTTATTCCCCCAACATGATAAGGAATATTTAAACACAGTATTTTCTG
GGTCCATACATATCAATGAAGCTGTTGAGAAAATATTAAAGGAAATGAAC
AATTTGGAACACGGTAACAAAAACCTTCTCGAGGAAACAGATATTCCTGG
AGGAACACGGTAACAAAAACCTTCTCGAGGAAACAGATATTCCTGGAGGT
TCTGGTAATAATGATCTCGTTGAAAGTGATAGCAGCAACAGTGACCATGA
CAGCCTACCAGATAGTGGTGTTGGTAAGAAAATAAAAGACCAAAAGTTGA
AGTGGGAATCATTCAAAAGGAGGAACTTGAAAAAAGGGCATGTTCTCGTT
AAAATAAACCGTGATACAATTCTTTTATCGACAATGACTTTGTTCAAGCG
TGGAGATATCAAAAACATTTCTATTCCACCAGAAGTTAAATTTCAAAATG
AAGATGGCATCGACGCTACCGGCCCGAGAAAGGAGTACTTTTTTCATACG
ATTAAATCTTTTCTCAGCGGAGAAAAAAACATTGTGTTGTTTGAAGGCCG
TGAAGACCGTAAAGTTCCAGTACATGACACTGATCTGTTGGCTTCAGATT
TCTTTTATTATGCTGGGAAATTTGTGGCAATGGCTTTCTTCCATGGGGAA
ATTGGAATATGGAGTATTTCGCCTTGCATTCAAGAATACATCTTGTCTGG
ATCCAAAACAGCAGCAATTGCACTTGTAGAAGCGAAAGATGTGGCTGACT
CGGAAACCCAATCTATTTTGGAAAGTGTTCTGGTAATAATGATCTCGTTG
AAAGTGATAGCAGCAACAGTGACCATGACAGCCTACCAGATAGTGGTGTT
GGTAAGAAAATAAAAGACCAAAAGTTGAAGTGGGAATCATTCAAAAGGAG
GAACTTGAAAAAAGGGCATGTTCTCGTTAAAATAAACCGTGATACAATTC
TTTTATCGACAATGACTTTGTTCAAGCGTGGAGATATCAAAAACATTTCT
ATTCCACCAGAAGTTAAATTTCAAAATGAAGATGGCATCGACGCTACCGG
CCCGAGAAAGGAGTACTTTTTTCATACGATTAAATCTTTTCTCAGCGGAG
AAAAAAACATTGTGTTGTTTGAAGGCCGTGAAGACCGTAAAGTTCCAGTA
CATGACACTGATCTGTTGGCTTCAGATTTCTTTTATTATGCTGGGAAATT
TGTGGCAATGGCTTTCTTCCATGGGGAAATTGGAATATGGAGTATTTCGC
CTTGCATTCAAGAATACATCTTGTCTGGATCCAAAACAGCAGCAATTGCA
CTTGTAGAAGCGAAAGATGTGGCTGACTCGGAAACCCAATCTATTTTGGA
AAGTATAAAGAAAGCTTGCACGGAAGAAGACTTTGCTGATCTTAATGGGG
AAGATGGTATTTCATCACTGCTAAATGCTGCTGGTTTTGTCAATAAAATG
TTGGGTACAAAAACCAAGGATCAAGCGTACCAGGAAATTTTGTTCTATGA
GGTGATAACCAAAAGACGCGAAGAACTAGACGATTTCAGGAGAGGAATGA
TAAAGAAAGCTTGCACGGAAGAAGACTTTGCTGATCTTAATGGGGAAGAT
GGTATTTCATCACTGCTAAATGCTGCTGGTTTTGTCAATAAAATGTTGGG
TACAAAAACCAAGGATCAAGCGTACCAGGAAATTTTGTTCTATGAGGTGA
TAACCAAAAGACGCGAAGAACTAGACGATTTCAGGAGAGGAATG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000390_pilon | genome | sc0000390_pilon:90042..96249 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1003-1197:196 |
| Aaloc | 427-1002:1759 |
| Aaloc | 379-423:3054 |
| Aaloc | 223-378:5678 |
| Aaloc | 1-219:6209 |
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