|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000168_pilon:544723..548035- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_024094 ID=XLOC_024094|Name=XLOC_024094|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3313bp|location=Sequence derived from alignment at sc0000168_pilon:544723..548035- (Clytia hemisphaerica_ch_hm2_pilon)
ACGCGAAGTCGTAATGCTGGACAAAAATTGACAAATACTTCTCCTGACCT
TTCAGTATGTTTTTAATCCTTTTTTTAAGTTTTTAATCAATACTGGTTAA
AGAGGGTGGATTTTAATGGCTTGTTAACCGAAAAGTCTGTCTCTCTTCGG
AAGCATTGTAATACAGTATCCGGAAAAAAGTTTTTTACGGATACACTGTA
TTTTCCAGAGAAAAGATAGGCTACACGTATATTTCATTGTTCTACATTGT
AACAATTAACATTTAATGCTATCAATTTTATAACTTGTCGCTATGGGAAA
TATTAACCGGCCAAACGGCATCAAATATCTCAAGGGACTGACTGAGTAAA
CTTTTAAACTTCTTGCATATAAAGACTTATCAAATGTTAACTTTTTCTTC
TAAGGTCAATAGTGAAGCCTACCGGCATTGTAATGAGGGTACCGACCCTG
ATTTCCTTGTGAAACACTTCATCAATCAATTCATCGGTAAGTTATATGAC
ATTATTTTCATAGCATGCAAGAAATGTGGATACAGTGAGAAGGAAGAGAA
ATATTTGTAGGATAGCTATTGGCGATGATAGGGTGATACATTCTTCTCCG
CTTGAAGCTGCTCGAAAATAGCACCTGAGATACCAACTTGATGATATAAT
ACTTTCCTAATGGATAAGACAGGCTAGAAGTAGTATGTGGCTATAACACG
GCTTGTGTTGTTTACGCCGGAATGGAAAGTTAAATTCACTGTTAAATTTT
GAAAAATGTTAAATAAAAATTTACCCCTTAGTAAAATCACTACATTTTGA
TTCGTGATGTTAAATGTTGTTTCTATTCAATGAAACCCCTATAACCACGT
TCTGCGAAATATGAATTTTGTATTTACCTTCATCTTTAGGGTATGGAGTA
TTTGTAAATAAAAACATATCTCCATATGAATTCTTATGCGAATACCCTGG
AGATTTAATAAGTGAAGAGGAACGTGACGAGAGGGAACAAATCTACACGG
AGAAAGGCTTGGGGAGTTACATATTCGATCTCGAATATAATAAGCAAATG
TACTTGTAAGTATAATATAAAGTCTATTCGCTTGCAGCGTGGAGTAAAAT
GTTTGTTTTTCTTGCTTTTTCTTTACTTTAGTCGAGCTAAAGTTCTTTTT
TTCTTTTTCACGAGTCATTCCCATTTTACTAGGATGTTGAAAAATATTTG
ACGCCAATTTGTTTAAGGTGTCAGAATAAACGGTTGCCCTACACGGAAAA
AAATTCTTGATCCCTGAATTTACCTACGACTGAGCCTTCTCTAATCCTTC
TGAGTAATCATCGCTATGGGTTTTATGATTGAGTCTACCTATCCGGGGTG
TCCGTCAAAGTAGGCTTTATTCACCCAGCGTTTGCAATTTAACCATACCA
TATCCGAGTATCAATCTGGGTTTACAATCAAGCCTTCCCTAATTGTGGTT
ACTCATCACTCTGGGTTTGCAATCGGGCCTTCTCTTATCTATCATTTCAG
TTTATCTATCATCCTGGGTTTACAATTTGGTCTTCATCAATCTAGAGCGC
CTATCCCCCGGGGTTTCAATCGGCCTCCTTTTATCCTGAAGGTTCATCAC
CCTACATCACCCTGTATTAAATAGGTGTTTTGAGCACTTTCACACGTACG
AGCTCAGTGCTTTAGCAGTTCCAACAGATTATTCAATTTTAACAAGCTTT
AAACCGTGGAAAGATAATTCAGAGTACTATAATATATGGGAGAAATAATT
CCGGAAATTTTCAGAAGTGAACATTTTGGCTTGGGCGTTTTGGGCTTTGA
AACTTCATTTTTGTATTCTTTGGCTATTAGCAGAAAGTTCGGTCTCTCTA
GCTTCGATATTTTTTAGATAGACCATCCCCTAAGGTTTTTATGTAGTATT
GTAAAAGTGACATTTCATCAGTAAATGATGATCATGTTTTAATGGTCTTT
CTTTAGCAAAATGAAAAAATACTTTTTCTCTTTTTCAGTATCGATGGAAC
TCCAACGAACAAAATTGGACGCTTCATCAACGACAGCAGAATTGGATTCA
ATGCGAAAATGGTGGTGGCTGCTTGGGGTGGAAGGCCTCATCTCTGTCTC
TTTGCCACCAGCAAAGAAATAGTAAAAGGAACAGAGGTGAGGTACTGTTA
TGGTGCCATCAAAGGAGCCTCTTGGCGAAAGCAGGTATTTTATTGGAGTT
TGATTTCATTGACCAGTAAGATTTTTTTGTTTGTGTGGTTATGTCAAAAC
AATTTCAATTAAAATGTTATTAAAAACTGTCGGCGATTTCGAAAAACTAT
TGTTTAAGAGAGTCCACAGCTTTGTATAGAATAGAAACATCTCACTTAAG
GCCATCCACGATTATAGTCTCCATATCGTTCCTGCAATGCTATTCTACAT
TTTACCACTGAAAAGCCTTTTTTGTTGATAATTTTAACATTATTCCTTCA
TTACTTTTTTCAGAAACAATACTCGACACCTTTTAATCTGGCACAATTGA
AATTGGAAAAAGTGAGAAAACTTGCTAATTATACTGTATACTGTATGGGC
ATACAAACTTTGCGAGCAGAAACTTTAAATTTCAAGTTTTCAGCATATTT
TTTAGCATTTGTGGCCTTCTTAAAGTCAAAGAGCATCTGCTTAACTGCTT
TATCGGATTCGTGGAATATGTGTCACTTTTAAACTAGTTTTCGTTTGAAA
ATCCTCAATCTCACCCAATAATTCGCGAAGGTTTATGCTTGTGAAAAATA
TTTTTTTCCTCAAATCACGAAAGTAAAAATTTCGTGATTTTTAGACATGG
CGAAAGTTTCTGTTGACGAAAGTTTGTCTGAGTCGAACATGGGTGATTAA
TTTGTAGAAACCTGTCTATCTTGTACCAATGCGTCCCTAAAGAAGAAATA
AAAGCTTCACTTAACACTATGTTCGTTCACATTATTTGCAGCCAAAACTC
GACGAAAAAACAAATGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGAG
ACAAGAACAGCCAGAAGAAGAGAGACAAGAAAAGCCAGAAGAAGAGAGAC
GAGAACAGCCAGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGAGACGA
GAACAGCCAGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGAGACTAGA
ACAGACAGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGAGACGAGAAC
AGCCAGACGAAGAGAGACAAGAACAGCCAGAAGAAGAGAGAAAAGAAAAG
CCAGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGAGAAAAGTTCACGA
AGAAGATAATAAA Coding sequence (CDS) from alignment at sc0000168_pilon:544723..548035- >XLOC_024094 ID=XLOC_024094|Name=XLOC_024094|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1836bp|location=Sequence derived from alignment at sc0000168_pilon:544723..548035- (Clytia hemisphaerica_ch_hm2_pilon)
ACGCGAAGTCGTAATGCTGGACAAAAATTGACAAATACTTCTCCTGACCT
TTCAACGCGAAGTCGTAATGCTGGACAAAAATTGACAAATACTTCTCCTG
ACCTTTCAGTCAATAGTGAAGCCTACCGGCATTGTAATGAGGGTACCGAC
CCTGATTTCCTTGTGAAACACTTCATCAATCAATTCATCGGTCAATAGTG
AAGCCTACCGGCATTGTAATGAGGGTACCGACCCTGATTTCCTTGTGAAA
CACTTCATCAATCAATTCATCGGGTATGGAGTATTTGTAAATAAAAACAT
ATCTCCATATGAATTCTTATGCGAATACCCTGGAGATTTAATAAGTGAAG
AGGAACGTGACGAGAGGGAACAAATCTACACGGAGAAAGGCTTGGGGAGT
TACATATTCGATCTCGAATATAATAAGCAAATGTACTTGGTATGGAGTAT
TTGTAAATAAAAACATATCTCCATATGAATTCTTATGCGAATACCCTGGA
GATTTAATAAGTGAAGAGGAACGTGACGAGAGGGAACAAATCTACACGGA
GAAAGGCTTGGGGAGTTACATATTCGATCTCGAATATAATAAGCAAATGT
ACTTTATCGATGGAACTCCAACGAACAAAATTGGACGCTTCATCAACGAC
AGCAGAATTGGATTCAATGCGAAAATGGTGGTGGCTGCTTGGGGTGGAAG
GCCTCATCTCTGTCTCTTTGCCACCAGCAAAGAAATAGTAAAAGGAACAG
AGGTGAGGTACTGTTATGGTGCCATCAAAGGAGCCTCTTGGCGAAAGCAG
TATCGATGGAACTCCAACGAACAAAATTGGACGCTTCATCAACGACAGCA
GAATTGGATTCAATGCGAAAATGGTGGTGGCTGCTTGGGGTGGAAGGCCT
CATCTCTGTCTCTTTGCCACCAGCAAAGAAATAGTAAAAGGAACAGAGGT
GAGGTACTGTTATGGTGCCATCAAAGGAGCCTCTTGGCGAAAGCAGAAAC
AATACTCGACACCTTTTAATCTGGCACAATTGAAATTGGAAAAAAAACAA
TACTCGACACCTTTTAATCTGGCACAATTGAAATTGGAAAAACCAAAACT
CGACGAAAAAACAAATGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGA
GACAAGAACAGCCAGAAGAAGAGAGACAAGAAAAGCCAGAAGAAGAGAGA
CGAGAACAGCCAGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGAGACG
AGAACAGCCAGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGAGACTAG
AACAGACAGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGAGACGAGAA
CAGCCAGACGAAGAGAGACAAGAACAGCCAGAAGAAGAGAGAAAAGAAAA
GCCAGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGAGAAAAGTTCACG
AAGAAGATAATAAACCAAAACTCGACGAAAAAACAAATGAAGAAGAGAGA
CGAGAACAGCCAGAAGAAGAGAGACAAGAACAGCCAGAAGAAGAGAGACA
AGAAAAGCCAGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGAGACGAG
AACAGCCAGAAGAAGAGAGACGAGAACAGCCAGAAGAAGAGAGACGAGAA
CAGCCAGAAGAAGAGAGACTAGAACAGACAGAAGAAGAGAGACGAGAACA
GCCAGAAGAAGAGAGACGAGAACAGCCAGACGAAGAGAGACAAGAACAGC
CAGAAGAAGAGAGAAAAGAAAAGCCAGAAGAAGAGAGACGAGAACAGCCA
GAAGAAGAGAGAAAAGTTCACGAAGAAGATAATAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000168_pilon | genome | sc0000168_pilon:544723..548035 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 559-930:373 |
| Aaloc | 511-558:851 |
| Aaloc | 316-510:1325 |
| Aaloc | 151-312:2423 |
| Aaloc | 67-147:2910 |
| Aaloc | 13-66:3314 |
|
