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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:2590305..2595512- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_024052 ID=XLOC_024052|Name=XLOC_024052|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5208bp|location=Sequence derived from alignment at sc0000001_pilon:2590305..2595512- (Clytia hemisphaerica_ch_hm2_pilon)
TTGGCCGAACAACCTGACGTCATTACTGGTCGCCTGTTAAAGGCATTGGT
GCAAACACTGTTCGGTGGACCTCCAACTAATGACCAACCCCTACAACAAG
GTATTTTTCAACCTATTCATCTCTTGGCTCTTTCTGTCGGTTTAGTTTTC
ATTTGGATTACCGCAATACTTAGACCTAGGAGACTAAAAAATCGATGGGG
GGCCAAGTTTAACGGGAAGTCTACCGGGTGCATCATAAATAAGTATACAG
GTTTGTTAAATTATTGTTAGTTTATGTTTATTCATTTTTTATTGTACAAA
AGAAAGCCTCACTTAAATTCTTGTGTATAAAACTTCCTTACAATAAATAA
TGAATCAACAGAAAATTCTTATCCGTAAACTAATGATCATTTAACAAACC
TGTATACTTATTTATGGTGTACCTGGTACAGCCCCATGCGGACCCATATA
TTTACCACAATTTTACTACGGCCTTATAACTTCACTTTATAGATGAGGAC
GATGTATTTCCCAAGCAATCTTCGCAAGCACCGCCATCATCATCACAACA
AAACAATAAAACACACCCACGTGTTGTTGCTAGAGTACTCTCCATCGCAG
GGTACATTGCACTCATGCATCTCTATCACTTGGACGTCAGCATATTAAGT
GAGTTGAAGCGACGTCACAACATTCAAGAAGAAGAGAAGGAGAGAAAAGG
AAAGAAGAACGGCAAAACGCCAGGTGGCAGTCGAAGGAAAAGCGGTGCTC
GTGATAGCAGCATACATAAGGTAGTGTAAAGCTTAAAGTTGATATTTTGG
CTTTTTTGGACCTACCTGAGGTCCTATAAATTAACCCGCTCGTTAGTTCG
TTCCTTTGTTCGTTACCAGCTTTTCTCGAGATTGGCTCTTTTGATTTTTT
TGCATAAAAGTAGGGTACCGTCATTGGTAAAAGATAGCTCAAGCAGATTT
TCAACAAAAAAAATCTTGTTTCAAAAAACGAACCTTTATCTATAAGAAAC
ACTATTTATATACATACATTAATGTTCTTGGCCAAATTACTCAATCTTTT
GATGAGGTAGATATTCTCTTCCTTCCAAGCGCCTCCCTTAATACCATCCA
ATGGACAAGGGGACAATCAATGATGAAAATAAGCGACGAATTTCAATAAA
TCGTCACTATTTGTGTTCTGATTGATTGTTTTAACGGTCACGCTCACGTA
GATATCAATTATATATGTGTTAAATGCATAACCAGGTAGGTCCATAAAAG
TCTTTTATCTTCTTTTCTCTCTATTTAGATCGTCTGTTTTTGTTGTACCT
AAAACAGCAAAGACTTTTTATAGCTCAATCTAAAAAAATATCTTAATTTC
AAATTGACAGGATTCAGGCCTTGATGATGAGATGGGCGTTGGAGGGGCGG
CCGCAGAAGATGCAGAGGCGGAATATATTCGTAAGATCTGCGAAAGAGAA
ATCGTCACTGGTATGAATGTTATCTGATTTCTTCAAAATTGAAATTGAAA
TTTGAAATTTGATTATTGCTGGGAAGTTACTTTTTTGACAAAATAATGCT
TTAGGAAAAATGTACAGTCAGTCACTTTAATTGGGTTAATTTTCGGGAGA
TTTAATTTCGCGAGCCAAAAAGTCGCAAGTTTCTGGATTTGTTTTCGCCA
GCCAATGTTTTGAAAAATTTCGTGTTGATTTAATTTTGCGAATGAGTTTT
TAAGCAGCTGAAAATGGCCTTAAAGGTGGCAAAATGGAACAATTTAGACG
ATTTTTGCATCGAAAATATGATTTAAATAAACGATAAGTAAGTATTTAGT
CATGGCGTTCTAAATTACTAATTTAGAACGCCATGTATTTAGTCCATAAA
CAGCCAGTAAGATTACTTGCTGCTTCACTGGAGGAGATTAAAGAGTCGAT
CGTTGTTTTAGGTGACAACCTATTGAGTGTATTTGCTCCAGTTGCAGTGA
TGATTTGCAAAAACCCGTCAGCTTACAAAAATACTGAATTACGATCCAGC
GCTGCTTTGGCTTTGTCCAGATTTATGATGGTCAGGTATAGATTGCTTTT
GTACTGCTGCTCATCTTTTGATTAATTGCCCCCACTGGAACCTTCTTCGA
AAAAATAGTTTTATATTTTGCGTGCTAGATATTTCAGCTATATTTTGGTT
CTCATATTTGTTGTGACAAAGCATGATACTAACTTGATTTTGGGTATTTT
CTTACACTTAGTTCTGAATTTTGTGATCAGCATTTGCAACTTGTTTTCAC
CATATTGGAAAAGGTTCGTAGTTTTACCATAAAACATAATAATTCAAAAA
CATGTTTTCTGTGTAGTACGGTTTTTATCAACTTTCCCGAGTGGATTATT
TTTAGAAGGCCATACAGAAGAGTTAGAGCTAAAGAAGGAATTTTGAACAA
TATCTTTTTAAGTTAATTTTACCTCGTAGAAATCTCGAAAAGAATAATTA
ATATATAGATTGGAAACGCCCGAAAGAAACTTTTTGCATTATATCTGTTT
CATTCAGTCTGAATTTGCGATCGTGCGTTCCAACATGATGATCACTTTGG
GCGATCTGTGTTTCCGCTTTCCCAACCTCATCGAACCATGGACACCAAAT
CTCTATGCAAGGTAATCGCACCTTACATTTCTACTGAGCAACCGGCTGTA
TCTAAGAAAATGAGAAAATATTAGAGATTATCCGTGAAACCAAATTCGGC
ATTAAAAAAATGTCACCGTGTTTCTAGGCTTTATTCAATTTACTGATGGA
CATCAGATAATATGTTTATCCGGCGCCATCAGTAAGCATCGAAAAGTTGA
ACAATATGCGGCGAACGAGGTTGAAAACCAATGTATTCTTACCTTGGCTG
ACCTTTGAATTTGACAAATATTTTACGAGCCTGGTGATCAACACCCGGTA
TGTTTTCTTGAGAAAAAAAAACGATAGTCGAAAGACGAAACGAAGCCGAT
GAAAGACTATATCCACTAGCACTAGACGTACAACTAGAAGTTTTTTTGTT
TTTTCAGACTTCGTGATGAATCAGTGGAAGTGCGCAAGACAGCTGTCACC
ATACTAACACATCTCATTTTGAACGATATGTTGAAAGTCAAAGGACTAAT
CAGTGAAATGGCCATCTGCTTGGAAGATAAAGAAGACAAAATCGCTTCTT
CGGCTAAAAGCTTATTCGCTGAACTGGCTAGAAAGGTACTTATATCTTTG
TAATCGCAAAAGTTAACATTTCTCTTCGTATTTTCATTTCAAATCTGCAT
CTATCTCCTCAACCTTTTCTCCACCAGAGTTTATTTGATCATCAATTTAA
AAGAATTGGCCTAAAAACATTTCTTTTTCAGGGCAATGCATTGTACAACA
TAGCACCGGACATCATCAGTCGTCTCTCAGATCCGGACACTGGTGTCGAT
GAAAGTGTCTTCCGGATCATCATGAAGTAAGCCCTCCTCTACATCTAGCC
ATAGATTCAATTCATAACTTTACTACAAGCCAGGTGATAATCTTACACAA
AAATTTTTCAGCTGCAGTCTATAACAAAGAAATCTTCGCAGGTAATAATT
CTCTTCTCCAACAGATACATATTGCAGTTCATTCAGAAGGATAAGCAAGC
GGAATCTCTGGTGGAGAAGCTGTGTCATCGATTTAGAGCTACAAGGTTTT
ACTTTTTTTTAATTTGAGGATACTTTCAAGTTTCAAGTTTCACGTTCAGC
TTAGGAGCCAATTCCCTGATAGAGGGGTCCACCACGACCCAAGTGAAAAT
GTCATTGCATCAGGGCAAGGCTAGACAGAACTCAACATGTCACCCTTTAG
GACATCAAGGGTAATTAATGTGCAAATGTGTTAGCTTCGTCTCACTGTAG
CTCACGCCGGAGTAATAAACAGCTTTCTGGATTGATTAAAAACTATGGCA
TACTGTAGCCAAGTGAATTGAGATTAGTCGATTGCTACCCGATTCAAAAT
CAAGATTCTTCCATCAGTGATTACTGAGTTTTTTCCATGCTAATTTCTTC
CTAGAACGGATCGTCAATGGCGCGACTTATCATTTTGTTTATCGCTCTTA
CCATACACTGAGAAAACGTTGAAGAAGCTGATGGAGAACATTCGTTGTTA
CCATGACAAACTATCTGATGACGATGTCTATTCATGTTTCACTACAATCA
TTAGCAAGTCAAAGAAATTCTCCAAACAAGAGTTCAAGGTATTTCTCTCA
AATCATGCCGTCAAATTTAGCACTTTTTTCTCATTTTTTTCGACTGATTT
TCACGGTCACAAATTACGAAACCCTAACCCTTCTAATAATTTCTTGCTTA
CCTGGCTTAGAAAGCTATATTGATCTTGAATATAATGGAATATTTTCTTC
CTTTCAGACACTAGTGGAAGAGTTCGAAAGCACCATAGAAGGATACCATA
ATAAAGGTGTTGAAGAAAATGCTGATTTCGATAAAGCTGCAAAAGTTCTC
TCTCAAGCTGCTACACAAGGTAAATCGAATTTCAAAAGTTCTTGAAGAAG
AAAAGCAGAGCACCATGCTTGTATTCCTAGTGGTTCATGGTTTGAATATT
TGACTGAAGACTGCAATGGCAATTTCCTTATTCTGTTCGTTATCCATTGG
AAACAGTATACTTCATTAGGGCAATGAACTGTTATCAGATATAATCTTAC
TTTGGCTGCTTCATCGTCTATTCAGATTCCTTTTGTTAAAAGTGATTATT
GGTCGTAAAAACAGTTTCTCAAAATCCGAAGTGATATTTTCACTACATTT
GGTCTACATTTGGCGAAATTTTTGAATTTGTGAATTGAGCTTTTCGAAGT
ATTTCGCTCTAAAAACTTTTGCGATTTATTGAATGATTTGTTTTTAAAGT
AGGTTGTTTCTTTTTTGCAAACCTTCAGATAATTCAGCAACTTCTTTATA
ATAAATTTCTTTTTTATAAAAATTACGTTATTTCTAACTTGTCTTACTTA
GAAAACACGACGAAAAATCGGAAGAAGTCGACTCGCACCGCACGAAAACC
AAAACCGTGGGAAGTGGACGACAGTGAGGAAGACGTAGAAACGAACGACA
ACGAACCACCCAAACACCCTTCCCGAAAATCCACCAGAAACGTCACCAAG
AAAACCACCAAAGATAAGAGCGATGACGATTTCTCAGACAAAGAAAATCG
GAAAGCCTTACCGGGTGGCAAACGAAAAACAACGGAAAAGAAACGAAAAA
CGGTTCGG Coding sequence (CDS) from alignment at sc0000001_pilon:2590305..2595512- >XLOC_024052 ID=XLOC_024052|Name=XLOC_024052|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3330bp|location=Sequence derived from alignment at sc0000001_pilon:2590305..2595512- (Clytia hemisphaerica_ch_hm2_pilon)
TTGGCCGAACAACCTGACGTCATTACTGGTCGCCTGTTAAAGGCATTGGT
GCAAACACTGTTCGGTGGACCTCCAACTAATGACCAACCCCTACAACAAG
TTGGCCGAACAACCTGACGTCATTACTGGTCGCCTGTTAAAGGCATTGGT
GCAAACACTGTTCGGTGGACCTCCAACTAATGACCAACCCCTACAACAAG
ATGAGGACGATGTATTTCCCAAGCAATCTTCGCAAGCACCGCCATCATCA
TCACAACAAAACAATAAAACACACCCACGTGTTGTTGCTAGAGTACTCTC
CATCGCAGGGTACATTGCACTCATGCATCTCTATCACTTGGACGTCAGCA
TATTAAGTGAGTTGAAGCGACGTCACAACATTCAAGAAGAAGAGAAGGAG
AGAAAAGGAAAGAAGAACGGCAAAACGCCAGGTGGCAGTCGAAGGAAAAG
CGGTGCTCGTGATAGCAGCATACATAAGATGAGGACGATGTATTTCCCAA
GCAATCTTCGCAAGCACCGCCATCATCATCACAACAAAACAATAAAACAC
ACCCACGTGTTGTTGCTAGAGTACTCTCCATCGCAGGGTACATTGCACTC
ATGCATCTCTATCACTTGGACGTCAGCATATTAAGTGAGTTGAAGCGACG
TCACAACATTCAAGAAGAAGAGAAGGAGAGAAAAGGAAAGAAGAACGGCA
AAACGCCAGGTGGCAGTCGAAGGAAAAGCGGTGCTCGTGATAGCAGCATA
CATAAGGATTCAGGCCTTGATGATGAGATGGGCGTTGGAGGGGCGGCCGC
AGAAGATGCAGAGGCGGAATATATTCGTAAGATCTGCGAAAGAGAAATCG
TCACTGGATTCAGGCCTTGATGATGAGATGGGCGTTGGAGGGGCGGCCGC
AGAAGATGCAGAGGCGGAATATATTCGTAAGATCTGCGAAAGAGAAATCG
TCACTGGTGACAACCTATTGAGTGTATTTGCTCCAGTTGCAGTGATGATT
TGCAAAAACCCGTCAGCTTACAAAAATACTGAATTACGATCCAGCGCTGC
TTTGGCTTTGTCCAGATTTATGATGGTCAGGTGACAACCTATTGAGTGTA
TTTGCTCCAGTTGCAGTGATGATTTGCAAAAACCCGTCAGCTTACAAAAA
TACTGAATTACGATCCAGCGCTGCTTTGGCTTTGTCCAGATTTATGATGG
TCAGTTCTGAATTTTGTGATCAGCATTTGCAACTTGTTTTCACCATATTG
GAAAAGTTCTGAATTTTGTGATCAGCATTTGCAACTTGTTTTCACCATAT
TGGAAAAGTCTGAATTTGCGATCGTGCGTTCCAACATGATGATCACTTTG
GGCGATCTGTGTTTCCGCTTTCCCAACCTCATCGAACCATGGACACCAAA
TCTCTATGCAAGTCTGAATTTGCGATCGTGCGTTCCAACATGATGATCAC
TTTGGGCGATCTGTGTTTCCGCTTTCCCAACCTCATCGAACCATGGACAC
CAAATCTCTATGCAAGACTTCGTGATGAATCAGTGGAAGTGCGCAAGACA
GCTGTCACCATACTAACACATCTCATTTTGAACGATATGTTGAAAGTCAA
AGGACTAATCAGTGAAATGGCCATCTGCTTGGAAGATAAAGAAGACAAAA
TCGCTTCTTCGGCTAAAAGCTTATTCGCTGAACTGGCTAGAAAGACTTCG
TGATGAATCAGTGGAAGTGCGCAAGACAGCTGTCACCATACTAACACATC
TCATTTTGAACGATATGTTGAAAGTCAAAGGACTAATCAGTGAAATGGCC
ATCTGCTTGGAAGATAAAGAAGACAAAATCGCTTCTTCGGCTAAAAGCTT
ATTCGCTGAACTGGCTAGAAAGGGCAATGCATTGTACAACATAGCACCGG
ACATCATCAGTCGTCTCTCAGATCCGGACACTGGTGTCGATGAAAGTGTC
TTCCGGATCATCATGAAGGCAATGCATTGTACAACATAGCACCGGACATC
ATCAGTCGTCTCTCAGATCCGGACACTGGTGTCGATGAAAGTGTCTTCCG
GATCATCATGAAATACATATTGCAGTTCATTCAGAAGGATAAGCAAGCGG
AATCTCTGGTGGAGAAGCTGTGTCATCGATTTAGAGCTACAAGATACATA
TTGCAGTTCATTCAGAAGGATAAGCAAGCGGAATCTCTGGTGGAGAAGCT
GTGTCATCGATTTAGAGCTACAAGAACGGATCGTCAATGGCGCGACTTAT
CATTTTGTTTATCGCTCTTACCATACACTGAGAAAACGTTGAAGAAGCTG
ATGGAGAACATTCGTTGTTACCATGACAAACTATCTGATGACGATGTCTA
TTCATGTTTCACTACAATCATTAGCAAGTCAAAGAAATTCTCCAAACAAG
AGTTCAAGAACGGATCGTCAATGGCGCGACTTATCATTTTGTTTATCGCT
CTTACCATACACTGAGAAAACGTTGAAGAAGCTGATGGAGAACATTCGTT
GTTACCATGACAAACTATCTGATGACGATGTCTATTCATGTTTCACTACA
ATCATTAGCAAGTCAAAGAAATTCTCCAAACAAGAGTTCAAGACACTAGT
GGAAGAGTTCGAAAGCACCATAGAAGGATACCATAATAAAGGTGTTGAAG
AAAATGCTGATTTCGATAAAGCTGCAAAAGTTCTCTCTCAAGCTGCTACA
CAAGACACTAGTGGAAGAGTTCGAAAGCACCATAGAAGGATACCATAATA
AAGGTGTTGAAGAAAATGCTGATTTCGATAAAGCTGCAAAAGTTCTCTCT
CAAGCTGCTACACAAGAAAACACGACGAAAAATCGGAAGAAGTCGACTCG
CACCGCACGAAAACCAAAACCGTGGGAAGTGGACGACAGTGAGGAAGACG
TAGAAACGAACGACAACGAACCACCCAAACACCCTTCCCGAAAATCCACC
AGAAACGTCACCAAGAAAACCACCAAAGATAAGAGCGATGACGATTTCTC
AGACAAAGAAAATCGGAAAGCCTTACCGGGTGGCAAACGAAAAACAACGG
AAAAGAAACGAAAAACGGTTCGGAAAACACGACGAAAAATCGGAAGAAGT
CGACTCGCACCGCACGAAAACCAAAACCGTGGGAAGTGGACGACAGTGAG
GAAGACGTAGAAACGAACGACAACGAACCACCCAAACACCCTTCCCGAAA
ATCCACCAGAAACGTCACCAAGAAAACCACCAAAGATAAGAGCGATGACG
ATTTCTCAGACAAAGAAAATCGGAAAGCCTTACCGGGTGGCAAACGAAAA
ACAACGGAAAAGAAACGAAAAACGGTTCGG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:2590305..2595512 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1411-1665:256 |
| Aaloc | 1297-1407:852 |
| Aaloc | 1114-1296:1204 |
| Aaloc | 1033-1110:1644 |
| Aaloc | 937-1029:1878 |
| Aaloc | 760-936:2201 |
| Aaloc | 655-756:2702 |
| Aaloc | 604-654:2997 |
| Aaloc | 481-600:3296 |
| Aaloc | 379-477:3849 |
| Aaloc | 103-378:4715 |
| Aaloc | 1-99:5209 |
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