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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000355_pilon:34224..37202+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_024041 ID=XLOC_024041|Name=XLOC_024041|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2979bp|location=Sequence derived from alignment at sc0000355_pilon:34224..37202+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGATATAATGGCTAATATGGATATTCATACATTGACAGATGATCA
ACAAACTATCTTGCAATTGCAAGATACCATTTATTTTCTGGAAGGAAAAC
TTTcagaaaaagataaagaaattattCGTCTAAACATCGACCTCCGTCGC
ACGATGGACGTAAGTTGAACATTCGTAATTTCTATTTagttgagttacag
gaggctttgggacctattttcgcaactatagacgctttcaattagcGTCT
CGTCAGCActttggactgactacccaattccctcTCACATGGCAGGGGTT
GACccggcgaaggttcattcacttgccaagtaaaCCACtgcgagtgggat
tcgaacctcagtcgcctgtacagcaaccaaggtcaatgaccactatacca
caacgcctTATTCGACATTGGCTGAATACTTTGTTCATACTTAATACAGT
GCAGTCTCCaaaactcgaacacgcacggagaacacaaattttttcgagtt
aaggaaattttgaattatggaggaaggtttataaggcattgttaactgaa
aggacgAGAAAATTTGTTAGAGttttaaggagacattcgagttgtaggGG
TTCGAGATAAGAGACTCTGCTGTACCTTCTTACACAAGACAAAACAGAAA
TCTGCCAAGATCATGTTAATGTTACCCATTCAAGAAAAATTGAGCCTAAG
GCCTAAGCCtaaataacttttttaaatatgcTTTAATACCTAAGTTGTTT
ATTTAATCATTTAATCAGGGACCTATCAAACAAAAGAATAGATTTAATGC
GGTGGAAAAGCTAAATTTCCTTTTTGAATTGAGTTGCTTAGAAAACTTCG
TTCTGCACTCACTTAACTAAATCGGTAGACTCATCTTATTAAAGACGAAT
AACTGTCAACTAAAACAAGCAATTTCTGATCTATGTATTATAGGAGCGCC
AACTTTGCCTCCAATTCGAAAATTCTGCTCTGAAGAGGAAGGCGGCTGAG
CATAACAAAACCGTCCTCCCTTTGaggaaagaaaataatgaattgcGAGC
AGAGAACGAGTCTCTCACCAGTACTATTATCGAACATATGGAGAGAGAAG
TAAACAGAGGGAAAGGTAAAGACGCAGCGTCACAAACTATCGAGTTGCAA
CCTAAAACAACCTCCAGTGGTTGCCAAACACTTGACATGCAACCTAAAAC
aacctccagtggttgtcaaacaCTTGACATACCACGCAAAACAACTTCCA
ACGGTTGTCAAACACTTGACATGCCACGCAAAACAACCTCCAGCGGTTGC
CAGACTATCGAGCTGCAACCCAAAACAACCTCCAGCGGTTGCCAGACTAT
CGAGCTGCAACCCAAAACAACCTCCAGCGGTTGCCAGACTATCGAGCTGC
AACCCAAAACAACCTCCAGTGGTTGCCAGACTATCGAGCTGCAACCCAAA
ACAACCTCCAGCGGTTGCCAGACTATCGAGCTGCAACCCAAAACAACCTC
CAGCGGTTGCCAGACTATCGAGCTGCAACCCAAAACAACCTCCAGCGGTT
GCCAGACTATCGAGCTGCAACCCAAAACAACCTCCAGCGGTTGCCAGACT
ATCGAGCTGCAACCCAAAACAACCTCCAGCGGTTGCCAGACTATCGAGCT
GCAACCCAAAACAACCTCCAGTGGTTGCCAGACTATCGAGCTGCAACCCA
AAACAACCTCCAGCGGTTACCAGACTATCGAGCTGCAACCCAAAACAACC
TCCAACAGTTGTCAAACACTTGAGTTGCAACCTAAAACAACCTCCAGCGG
TTGCCAGACTATCGTGCTGCAACCCAAAACAACCTCCAGCGGTTGCCAAG
CAAATGCACATTGGTACATCGAAGATAAGAACCCATTGAATGTTGGTGGC
TTTGGTTTACCTAAGGTATTTATAATTTCCACCTCTCACCTTAGTAGTAT
AGAATCTACCTTTGGCTTGACTCTGCTTTTTGACTGTCCCTGTGAAGTAG
ACTAGGCCACTTGGCAAGGTCACCGTTGGGAAAAAGAATACCAAAATTTT
TATCCTCACATCTATTGTTCACCATTTAAAAACATCCGGAATCGGTTGGA
ATGCTTTATGAGTCGTCAAAGCAAAACTAAATCTTAAAAAGCGCCTTATG
ATTCCAGGCAATTAATCGCTATATACAGTGGCCTCCAGGCTACACCAGAT
AAAGTATTTTTTGGGAAGATGCATAGAACATTATCAAATGTCTCTTTTAG
AAgtaattaaattgaaaaaatcgtCAAGAGATGATATCCTGACCGAAATT
CAGAATTGAACTATAGAATATTTGATCCGAagtaacttttctttttttat
agaaCTACCAACGCCAAAGAAAGGTTATTAAACCATTTGTCAATCAAGGT
GGTTTTGGAAGCCCAAAAGTAAGTAACaaaaaaaCCTCACCATAGAAAAC
ATAACATCTGTATATCAAAAATACTTTGTGAATCCAGGAAGTTCCAAGAT
GAAAAATATAGTAACAcaacataaattttgaacctaatattcacaaaata
catttttatttctttttctatttggtttttctattttattttgagGCCCA
CTTTCGCAAATATAGACTATAGCGCCCCGTcggcaccttgaactgactac
ccaattcccctcgcATGACATGCATTGACCCGGGCGAAgattcattcact
tgccaagtgaactgctgcgagtgggaatcgaacctcagtcgcctgtgaag
caaccaaggtcaatgacacTATAAAACAGCGCCGTTCTAATATCCAATAT
CCGAATCAAATTCTGATTGGGTGTCCAACACAAGTACGAATTATAGAGAG
CTAAACAAATTTGCTTTATTTTCCTTCTTTTAGGATTTCACTAAGCGTGC
TTTTGGGGGCCTAAAGAAGAGCAAAAAAGCTGCTTTCAAACCATCACAAG
CAGCAAAAACCAACAAAGATGGCtttgga Coding sequence (CDS) from alignment at sc0000355_pilon:34224..37202+ >XLOC_024041 ID=XLOC_024041|Name=XLOC_024041|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2166bp|location=Sequence derived from alignment at sc0000355_pilon:34224..37202+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGATATAATGGCTAATATGGATATTCATACATTGACAGATGATCA
ACAAACTATCTTGCAATTGCAAGATACCATTTATTTTCTGGAAGGAAAAC
TTTcagaaaaagataaagaaattattCGTCTAAACATCGACCTCCGTCGC
ACGATGGACATGAGTGATATAATGGCTAATATGGATATTCATACATTGAC
AGATGATCAACAAACTATCTTGCAATTGCAAGATACCATTTATTTTCTGG
AAGGAAAACTTTcagaaaaagataaagaaattattCGTCTAAACATCGAC
CTCCGTCGCACGATGGACGAGCGCCAACTTTGCCTCCAATTCGAAAATTC
TGCTCTGAAGAGGAAGGCGGCTGAGCATAACAAAACCGTCCTCCCTTTGa
ggaaagaaaataatgaattgcGAGCAGAGAACGAGTCTCTCACCAGTACT
ATTATCGAACATATGGAGAGAGAAGTAAACAGAGGGAAAGGTAAAGACGC
AGCGTCACAAACTATCGAGTTGCAACCTAAAACAACCTCCAGTGGTTGCC
AAACACTTGACATGCAACCTAAAACaacctccagtggttgtcaaacaCTT
GACATACCACGCAAAACAACTTCCAACGGTTGTCAAACACTTGACATGCC
ACGCAAAACAACCTCCAGCGGTTGCCAGACTATCGAGGAGCGCCAACTTT
GCCTCCAATTCGAAAATTCTGCTCTGAAGAGGAAGGCGGCTGAGCATAAC
AAAACCGTCCTCCCTTTGaggaaagaaaataatgaattgcGAGCAGAGAA
CGAGTCTCTCACCAGTACTATTATCGAACATATGGAGAGAGAAGTAAACA
GAGGGAAAGGTAAAGACGCAGCGTCACAAACTATCGAGTTGCAACCTAAA
ACAACCTCCAGTGGTTGCCAAACACTTGACATGCAACCTAAAACaacctc
cagtggttgtcaaacaCTTGACATACCACGCAAAACAACTTCCAACGGTT
GTCAAACACTTGACATGCCACGCAAAACAACCTCCAGCGGTTGCCAGACT
ATCGAGCTGCAACCCAAAACAACCTCCAGCGGTTGCCAGACTATCGAGCT
GCAACCCAAAACAACCTCCAGCGGTTGCCAGACTATCGAGCTGCAACCCA
AAACAACCTCCAGCGGTTGCCAGACTATCGAGCTGCAACCCAAAACAACC
TCCAGTGGTTGCCAGACTATCGAGCTGCAACCCAAAACAACCTCCAGCGG
TTACCAGACTATCGAGCTGCAACCCAAAACAACCTCCAACAGTTGTCAAA
CACTTGAGTTGCAACCTAAAACAACCTCCAGCGGTTGCCAGACTATCGTG
CTGCAACCCAAAACAACCTCCAGCGGTTGCCAAGCAAATGCACATTGGTA
CATCGAAGATAAGAACCCATTGAATGTTGGTGGCTTTGGTTTACCTAAGC
TGCAACCCAAAACAACCTCCAGCGGTTGCCAGACTATCGAGCTGCAACCC
AAAACAACCTCCAGCGGTTGCCAGACTATCGAGCTGCAACCCAAAACAAC
CTCCAGCGGTTGCCAGACTATCGAGCTGCAACCCAAAACAACCTCCAGTG
GTTGCCAGACTATCGAGCTGCAACCCAAAACAACCTCCAGCGGTTACCAG
ACTATCGAGCTGCAACCCAAAACAACCTCCAACAGTTGTCAAACACTTGA
GTTGCAACCTAAAACAACCTCCAGCGGTTGCCAGACTATCGTGCTGCAAC
CCAAAACAACCTCCAGCGGTTGCCAAGCAAATGCACATTGGTACATCGAA
GATAAGAACCCATTGAATGTTGGTGGCTTTGGTTTACCTAAGaaCTACCA
ACGCCAAAGAAAGGTTATTAAACCATTTGTCAATCAAGGTGGTTTTGGAA
GCCCAAAAaaCTACCAACGCCAAAGAAAGGTTATTAAACCATTTGTCAAT
CAAGGTGGTTTTGGAAGCCCAAAAGATTTCACTAAGCGTGCTTTTGGGGG
CCTAAAGAAGAGCAAAAAAGCTGCTTTCAAACCATCACAAGCAGCAAAAA
CCAACAAAGATGGCtttggaGATTTCACTAAGCGTGCTTTTGGGGGCCTA
AAGAAGAGCAAAAAAGCTGCTTTCAAACCATCACAAGCAGCAAAAACCAA
CAAAGATGGCtttgga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000355_pilon | genome | sc0000355_pilon:34224..37202 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 988-1083:2884 |
| Aaloc | 922-987:2353 |
| Aaloc | 529-921:1523 |
| Aaloc | 160-528:944 |
| Aaloc | 1-159:1 |
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