|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000357_pilon:179659..183948- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_024011 ID=XLOC_024011|Name=XLOC_024011|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4290bp|location=Sequence derived from alignment at sc0000357_pilon:179659..183948- (Clytia hemisphaerica_ch_hm2_pilon)
TGTATGATAGATCCATTTGGTGAGAGTTCTGCTCTATTGACAGAAACCAA
GCAAGCTTGGGAGTAAGTTCAAATACTGTATATTTTCCTTTAAACCAAGA
TACAGTATTTTATTGCGATTTTTGCATTTCCATTTGGGTTTATATCCAAA
ACGATTTATATTGACTGATGTATAATTTGTTAGTCCCGAAGAAAATGATT
TCACCCGTTCATAATACTTTTGCACGAGCTACATCTTAAGGAATGTTACT
ATCCTCTTAATCCTAAAGTTTCCAGAAATTTCTACTAAAAAATATCATTA
TTTCTTCGCTTAAACCTATTTTAATCCTTTTTCACGTGTTTTTGATTTTA
TTTTTCTCTTCTCCATTTGCCCCTTTTATTTATAAAAAATAAAATTATTT
TACTCTAGAGCATTTATGACAAGAAACTTTGATGCGAACCAAACTTGGAA
AATTGTTTGTAAAAAACATGCCTTGCAGAAAGACATCATATCATGCGGAG
TGTTTTGCCTGAAGGTGAGTTAGCCTTTATTTTAAAATCTGTAAAATCTA
AATACCAATGGAAAGAGCATGAAATTCCTATTAAAATTTAGTTACAAGAC
ATGCTTTTATTATTTTTCTATCAAAAGTTATGACGAATCAAGGTTTTCTG
ATGATGTCATCACAAGCTCTCCCAGGCAAAACTAAAAAATAATCCTAGGA
TGCACGATACTAAACTCGAATCTGTAAATTATATGTATAAGGGCCCGTAT
ATAAAGGGCTCGCATATCAAGCTTACGATTTCTTTTAAGGTTCGTTCTAT
AGTAAATTTATTCCAAAAAAGCTAAAAAACGACATGTTTAATTCCCAAAG
ATCATGACAGCAGAATAACTTGATAAGAAGATTGTAAATATACGAGTTTA
AAATACTTTATAATACTTTTAGCAATTTCTTTACATTAAGATTATTCATC
AAGATTTAATAGACAAACAATTTTACGGAGTTTTCCATACCTCTTGTCAT
GGTGTCAATATCTTGTTTCTATGTTTCATTAGTTTGCCGAGGCCATGCTA
AAAGAAGAAGATCTACCAACAAAACTTCCCCCAAAAGAGCTCCGTGATTA
CCGTCGTAAAATTGCCATTACGTTGATAGAAATTGGAGGTATGACTATTT
ATTATCATTTTTCTAATTTTACTATCTTTTAGTCTAAGACAAAGTCACTA
ACTCAAGATCATTCGAAGCTGGAATCAAACTTCGGGTGGCTTTTTGGAGG
AAATTTTTAGTCACCCGATAGATTCAGAAAGTCTTTATATCACTCAGCCT
TATAGCCAACTACTTCTCCGTAAACTATAAATTACGTTTTTTATACAAAT
ATGATATAACATGATAAACGTTGTTTCAAAAATATTGGCAGTCCGCACAT
ATCGGTTAGTTGCTCTCAAAGGAAAGAAAGATACAATTAAAAGTAAAACT
CGTTGAAAAGATAATTGGTAACTTGGCCAAAATATTTTTCTGACGCTTTG
AACTTCGCTGATTTAGAATATGTATTTCAGATCAAAAGAAACGTTCGTAC
AGGCCTCCGAAGTTGGTCCATTTTGCCTCTGTTGGCCCGTTTTTGACCAT
TCTAAGCCTACTTTGGAGGCCTGAACTTTTTTTTTGAAGAAAGATATGAA
AAATTGGTAGACATACCCAAAGTTTCAGAAAAATATAAATTAAAATATTT
TGGCTACTAACAAAAATCTTCATTTTTTATTTTCGAATTCAATGAAACCT
TTTAAAGCTTTAAACTCAGAATTATCTTTTCAACGAGGTATTACTTTTGA
TTATATATTTTTTTCCTTCAAGAGAAATTAAACAAAATGTGTGGGTTGCC
AATTCTTTTGAAATATACTACTCGATGTCAATAACCATCGCCTACTATTA
AATCCAATTAAAGTTTGTCAATCCTTTTTTATCAATAACAGTTGAATTTT
CGTACCAGAGAATTTTGGGATTGAGGCAGTCTTCGAATGTCTATCAGAAC
TTGTACAACTCGATATATTTATGTATTGCTATAGGTAACGACGACTGGTG
TGGTGAAGTTTGCCGCTTATGTGACAGGACGTCTCCCCCACCGTCGAAAC
GATTTGGATCAAATCCGAAAGAATGGAGATGGGTAATTATGTGATTGATA
TTTTATAACCTTGAACCGATTCACTACTACTTTGGTCAATAAACTTTTGA
GTTCCTAAAAAGTAATGCACAAAAGAAACCAAGTGCACAATAAGTTTAGT
CTACGTCAGCTCTCTGAAAGAGCGAGGCCCTTCTGTAATGACACTTTAAG
TTTTGAAATCATCATTTTTGACATAAACTTAATATAAACTTAAAAATAAA
TTTCAAAATTGTTTTTTTGTGGGATTTTGCCCAAAGATTAAAATTTGACA
TAAAATGACTTCTTTGAGATTTAACCAGTTTTTGTTTGTCTTTTTTCATC
AAATTTATAAGAAAATTAGCAACTAGTGGACCAAAAGCATATCATTTAGT
GAATTAACTGAAAGTTTTACCACTGAACAATTTCCATTAATCCAGTCACT
GGCACTGACTTCTTTAATCACCCTCACATAACCTCTGGGTATTTAAAGTG
GTTTACGGTTTCAAGTTTTTTTTTAAGATAGACTTATGTTTGGTATGTTT
ATTACCTATCATTAAAAATCACCAAAAATCCTCAAAGTCTATTCCCGTGT
CCATGTCAAAAATAAAATTTACCGCATTCTGGGATCCACAGCCTGCAAAG
TGTTAATCGATTCTTCCCTATAGTGTAAAACGACCTCTATTCAGGTTATT
CTGTTATTTTTCATTAGTTATCTATTTTTCATCATCATAATTCTTTTTTT
TTGAATTTTCCAGGTTTGTTGTGACTTCTGCAAACCAGTCAAGTGGTATC
ACGGTGTTTGTTTGGGCATACGCGGCAGGACAGAATACCTCAGTGAAATA
AGCTATTTTTGCGGAAAGGTAAGTTCTTGCAATATCTTATTTTAGTTTAA
TGTAATGGCCGAGTATAGAATAATTATACCTGTTGCTACTACGCTTAGCG
TGTGAAATTTGACCAGCCACCGTGGTAGTTAATTAGGTCGGTTCGATACT
TTGCTCTTAAGAAATGACAAAAAATAATAATACGACAGAAGACTATATCC
TTTGGATTTCCTGTAGTTTTAAAAGCAATTTTCACTCACCCGATGAAAGA
TATAGCTTTTTCAGCGTTGAACATTTCAGAAAGATGAATCACAAAATGAA
TCATACCAGCCGGGTATCTAAGGCGAAAAAAAAAATGTAGTGTTTCTCGG
ATGTGCGGGTCAAGGAAAAAAGCTCTCATGTGGTCGGCCGGATAAAAACT
CTTTTGCTTTTTTGATAATTTATAAGATCATTGATGTACAACAGTACGAA
GTAGCCCTGAATACTAATGTATCAACTATAACGAAGCCTGTGGCGCGGTC
AGCAAGAATGGAGAGATTCTTTGATCTTGGGAGTAATCACACGTGAAGAA
ATTTCACTAAATAATTATTACAATATAAGTTATGATACAAAGTTAATAAG
TGATTGACCCCAAAAAACAGCAGAAAACAGCGTTTTTAGACGTCAATCAG
CTTATAACTTTGGTTGATATCTTTTGACTGAATATTTATTTTTGAGAAAT
TTTTCACAGTGATGACGTTCGATGATCAAGGATTCACTTCAGTGAAAATT
ATAGTTATAGCACTTTTCTACAAGATTTTCATTGTTTTCTTCTTCATTTT
CAACTTCATTTTTAGAATTTCTTTAAAGATTTTTTTATTTCAAATTGTTC
CACTCACTGATATCTCTTTTCAATGATACCAAATTTATAAAGATTGAAGA
ATTCCTTCAAAAGTTTTAGGTAAAAGAAAAAAGAGTGCACACTTATCGTG
AATAGACTTTATAATAATTGATTTTTTTCTTCTCTCATTCAGAAACTTGT
TCAGGATGAAATCTTCATTCTAAAATCAGGTGAAACTTTGATTCGCCAAC
GGACAAATAGGAGGGTCCGGAAGTGTTTCACATGCAGAGGCTCCTTGAGA
GACGAACCACTTAAGCCTCCTCACGATATGGTCTTGGTTCAGCTCAAAGA
GCGACCAATGGCAGGTGGCTCTTGGGCTGACAAAGATTCGTTGATATCGA
CATCAGTCCACTTCCATGCCAAGCCACAATGTGTTGGAAAGCTAGATCCC
AAGAAAGTCAAGCTCTCAAGAGAATTCAACGATCTTGATGATTCTCATCG
GGAGCAACTGCGACTTCTTGGTATCGATATGAATACTTTA Coding sequence (CDS) from alignment at sc0000357_pilon:179659..183948- >XLOC_024011 ID=XLOC_024011|Name=XLOC_024011|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1650bp|location=Sequence derived from alignment at sc0000357_pilon:179659..183948- (Clytia hemisphaerica_ch_hm2_pilon)
TGTATGATAGATCCATTTGGTGAGAGTTCTGCTCTATTGACAGAAACCAA
GCAAGCTTGGGATGTATGATAGATCCATTTGGTGAGAGTTCTGCTCTATT
GACAGAAACCAAGCAAGCTTGGGAAGCATTTATGACAAGAAACTTTGATG
CGAACCAAACTTGGAAAATTGTTTGTAAAAAACATGCCTTGCAGAAAGAC
ATCATATCATGCGGAGTGTTTTGCCTGAAGAGCATTTATGACAAGAAACT
TTGATGCGAACCAAACTTGGAAAATTGTTTGTAAAAAACATGCCTTGCAG
AAAGACATCATATCATGCGGAGTGTTTTGCCTGAAGTTTGCCGAGGCCAT
GCTAAAAGAAGAAGATCTACCAACAAAACTTCCCCCAAAAGAGCTCCGTG
ATTACCGTCGTAAAATTGCCATTACGTTGATAGAAATTGGAGTTTGCCGA
GGCCATGCTAAAAGAAGAAGATCTACCAACAAAACTTCCCCCAAAAGAGC
TCCGTGATTACCGTCGTAAAATTGCCATTACGTTGATAGAAATTGGAGGT
AACGACGACTGGTGTGGTGAAGTTTGCCGCTTATGTGACAGGACGTCTCC
CCCACCGTCGAAACGATTTGGATCAAATCCGAAAGAATGGAGATGGGTAA
CGACGACTGGTGTGGTGAAGTTTGCCGCTTATGTGACAGGACGTCTCCCC
CACCGTCGAAACGATTTGGATCAAATCCGAAAGAATGGAGATGGGTTTGT
TGTGACTTCTGCAAACCAGTCAAGTGGTATCACGGTGTTTGTTTGGGCAT
ACGCGGCAGGACAGAATACCTCAGTGAAATAAGCTATTTTTGCGGAAAGG
TTTGTTGTGACTTCTGCAAACCAGTCAAGTGGTATCACGGTGTTTGTTTG
GGCATACGCGGCAGGACAGAATACCTCAGTGAAATAAGCTATTTTTGCGG
AAAGAAACTTGTTCAGGATGAAATCTTCATTCTAAAATCAGGTGAAACTT
TGATTCGCCAACGGACAAATAGGAGGGTCCGGAAGTGTTTCACATGCAGA
GGCTCCTTGAGAGACGAACCACTTAAGCCTCCTCACGATATGGTCTTGGT
TCAGCTCAAAGAGCGACCAATGGCAGGTGGCTCTTGGGCTGACAAAGATT
CGTTGATATCGACATCAGTCCACTTCCATGCCAAGCCACAATGTGTTGGA
AAGCTAGATCCCAAGAAAGTCAAGCTCTCAAGAGAATTCAACGATCTTGA
TGATTCTCATCGGGAGCAACTGCGACTTCTTGGTATCGATATGAATACTT
TAAAACTTGTTCAGGATGAAATCTTCATTCTAAAATCAGGTGAAACTTTG
ATTCGCCAACGGACAAATAGGAGGGTCCGGAAGTGTTTCACATGCAGAGG
CTCCTTGAGAGACGAACCACTTAAGCCTCCTCACGATATGGTCTTGGTTC
AGCTCAAAGAGCGACCAATGGCAGGTGGCTCTTGGGCTGACAAAGATTCG
TTGATATCGACATCAGTCCACTTCCATGCCAAGCCACAATGTGTTGGAAA
GCTAGATCCCAAGAAAGTCAAGCTCTCAAGAGAATTCAACGATCTTGATG
ATTCTCATCGGGAGCAACTGCGACTTCTTGGTATCGATATGAATACTTTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000357_pilon | genome | sc0000357_pilon:179659..183948 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 478-825:349 |
| Aaloc | 373-477:1428 |
| Aaloc | 277-372:2255 |
| Aaloc | 169-273:3259 |
| Aaloc | 64-168:3882 |
| Aaloc | 1-60:4291 |
|
