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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000188_pilon:249735..254015+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_023702 ID=XLOC_023702|Name=XLOC_023702|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4281bp|location=Sequence derived from alignment at sc0000188_pilon:249735..254015+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACTCATTGAATTTACGAGTTGTTGAGATAGCTACTAACGCCTTAGA
CACTGAATATGAGAGCTCAAACCTCATTTATTTTGTACCTATATTGAGAG
AAATGCTTTGGTGTCTGGAAGAATTCCATTTCACTGACTGTGAACATACA
GATCAGACCCCGATGGATttattacgcacggagcgagcgttagcgagcgg
agtgcgactcttttggcaaaagcgcgggaaaaagctgatatgcggggtga
taaaatcgatttttcagcttttttagcctcgtttccattcagactttcgt
cgtcgtgtgcaactgtcttaagtccGAACATCGAGAATTGTCGCCtgcac
ccgactgtctgttggaagcattacgtaatggattttttccaaatctcttt
gtaaatcgagctccggcgtcAAAAACAGTAGAGTATTTTTATACGAGGAT
GAacacgtcatttcttcgagaaacgtcgcgggaaaatataagtatccttc
tcgatcgggaaacgtcgctcggttcggaagcgtattgttgatcggaccat
actgctttctaacagtcaaaacaaagatggcggcaaaaataaacaactgg
ttgctaactgctctttcgctattttttttgctttttatgctttaatgagt
tgaattggatcatgatttttgtgtgattgttacaaaaaattgttgatgat
gaagttttcttattattcattcctggatttgatgtttcgtttggtttggc
atgaaTGAGAGATGCATGAGACGTATGCAAtctcttgaaaaacaggacat
tttatcaactttcacaacaaactaacttcaattttgcccgcACATTTGCA
CAAATTCTAACAAGACAGGTgactgaatatttttggataaatctgaccat
gctatgaatacttgcaacatcaaaaaagtttgaactcacttttttttatg
atggtcagCAGATGGTAATAGTCTAGACTAGAGATGTGGTACCCaaggaa
atggttgtggttggatatgaactggttagctttaacgtaaaaatttaaac
ctgaagcaaaatttactgattgatgattgaatttcccttggcgttttaaa
aatgcaacttggaaaacttttggttgtgaatttggacattctCTTGCACG
TGTGTTGAAAACgttgaaatttttgctgtgaatttggacattttcttcca
catgcgtttaaaacgtggaaaacttttggttgtgaatttgtacattttct
tccacgtgcgtttaaaacgtggaaactttttgctgtgaatttggacattt
tcttccacgtgcatttttaaacgtggaaaaccttattggttgtgaatttg
gatattttcttcaatgtgcgtttgaaacgtggaaaacttttggttgtgaa
tttggacattttcttccaagtgcgtttaaaacgtggaattTTTTGCTggg
aatttggacattttcttccacatgcttttaaaacgtggaaatttttgcac
TTGTTCAAATGTACAAGAGTTGGTTTGTGTGTGaaaaaatctgcgtatgt
aaaaataaaaaaatgtttagaaaaatgAGATGATCGGATAATTAAAAACT
ACTAACTAACAAACAAATCTTGATTTATAtacaagtgggaatatctaacc
aaattACTTTGATAGCTTAAATTctccaacttgattttttttataatgaa
ctactatatatagatgaacccatagtctgcGgccagatcagaaaattatt
atttttcacccggttggtttccagaaacgctacatttttttattttcgcc
tcaattgaaaatgttttcaagcaatatcctagcatgaagactttttttct
ttttggaaattatgctgaattatgtgacatttttttgcttttgcagcatg
attttgaaaattataaaatcccttctgctaggggaattttttccgtTCGA
CGTTCTTTcaatgtgatttttttttcttcttttgcattacacttttttta
tataagaaccagtaaaatttgtctgagcctcgactgttcttatttttttt
tgcactttgagcctctatcatgttcttatttagtaTGATGTTagtgaggt
attttaggcattatacccaatttttattaatttgacccctaaattgcttg
aaattgagtacatgttttgtttttataagcaagtgtatgccccttggtca
gactcgagtatgcttaagctttcaaagcatccagacatagaatatgctta
attattatatgcttaagaattattatgcttttgattcaccgaaccaaatt
ttttagtaaaatctttaaaattttgttaatattcgattaaaaaagcattt
aaatttttgagcagtggaatgtggctagccgtggaatgtcattttttact
tgaccaaattgcaaacctttttgaataaaaagagattgactacttgaaaa
atatttcaggctggcgtatatgcttatgttttgcttaggaaatctgcaaa
tctgagccttcatatgcttataagcgttatgcttataaaaaataaaacat
gtagtttcaggctcagcattgttcttacattgttcctattttttggcgat
tttgagcctcgttgttcttataaaattgttcttatattaaaaaaagtgtt
taaccttttgacatgcatttcaaaaaagaaacttttggatactataattt
tttgccttcttttcaatatttatattttaccttttctccaatattttata
tattaaactttttttccaatattttatatatgaaagtatatgcaaaatat
ttcatctattttgaaaatataaattttcctttggttttcttattgtaaaa
tattctcaatttttgatgaacaagatcaatttttgtagatatacattACA
TACCCCActgatttaagaaaacgagaaaagagaaaaagagggaacgaaat
tccgttactttgcgcaaagtatcataagacattttttataccaaaaaatc
cttattatgttcttattttaggtcgaaattttaagatatttgagttgaaa
aaacttcaaaaaagcagtttgttttgaaaatagaatatcaactttctttt
agttcaccagagtttgtacatgtttaaaatgcattgatagaaattttcct
tgctctcgtaacgatcatgaaaattaccaaaaaaggtttgttcaccatGC
AAGTATCGCGAAAGTAGCCCAAATAATGCCTCTAACTgcctagactggag
tcgtttataatgcatgtaaacacaataaataatgatacgggatttagttt
gtataaacgactggaagaatccggtgttccagccttatagataccgggcc
tagctacgcagaaacttgcgtagcgagaaaacaatttatcaagcaacaac
aaactctcaaaataaaatcaactcaaatgaaacgtttttaacacacaaat
ccatacacattttatttttaagaattttttttgagcgggaaaaaatttta
attgcgatattgacactttttttttgtttggagttagtgcacaaaggttt
ctagacgactaaaatttacttttttgctttatttctaatatgtctgaatt
agtcgtctagcttgctagactactaaCTGCCTCTAATTATTTTccgatca
cgcatcacgcaaacAGCTGGgtataagtttttaaaattgtatcataaaat
ggctcactttctcattcccgggaaaacataCTTGCCCAACTCCGGGATCT
TTTCGCCTCTAGGCGTCTCCGGCAAAAATCGGCGTTAAATCTACTTTTTT
Ccgttgtacactagcaatcggaaagttttgctgggaataaggaagtttag
caatcctacggtatgtagtgtaaaaaacctttcgcttgcgaacacgagat
tttcatatcgtgcgtaaccccttttacaattgatttaCGGACTTTCCGGT
CAAATACCTCAGTCATAGTGAGTTTGAAATAGAGGACGGAAAAGTGTTTG
ATACAGTTGAAACTTTAACGAAATTCAAATCATTGGAACGTCTTGATATT
GATTGTCACTGGTCGTGTTATGAGCTCACGTTAGATGAATTCGCACTTTT
CCAACATTTGCCAGTatatttggttgattttggaaGTTTGAAGATTAACG
AAGACAATATCTTTGAATTTCGTCAGATTATGTTGAGAATGAAGATTGAA
AAGATCACCCAACGTAACTTAGGGGAAATGACAATCAATATTGTTAGCCA
TGGACCTGGTGGGATGTATAAAACTGTTTGA Coding sequence (CDS) from alignment at sc0000188_pilon:249735..254015+ >XLOC_023702 ID=XLOC_023702|Name=XLOC_023702|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1038bp|location=Sequence derived from alignment at sc0000188_pilon:249735..254015+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAACTCATTGAATTTACGAGTTGTTGAGATAGCTACTAACGCCTTAGA
CACTGAATATGAGAGCTCAAACCTCATTTATTTTGTACCTATATTGAGAG
AAATGCTTTGGTGTCTGGAAGAATTCCATTTCACTGACTGTGAACATACA
GATCAGACCCCGATGGATttATGAACTCATTGAATTTACGAGTTGTTGAG
ATAGCTACTAACGCCTTAGACACTGAATATGAGAGCTCAAACCTCATTTA
TTTTGTACCTATATTGAGAGAAATGCTTTGGTGTCTGGAAGAATTCCATT
TCACTGACTGTGAACATACAGATCAGACCCCGATGGATttatttaCGGAC
TTTCCGGTCAAATACCTCAGTCATAGTGAGTTTGAAATAGAGGACGGAAA
AGTGTTTGATACAGTTGAAACTTTAACGAAATTCAAATCATTGGAACGTC
TTGATATTGATTGTCACTGGTCGTGTTATGAGCTCACGTTAGATGAATTC
GCACTTTTCCAACATTTGCCAGTatatttggttgattttggaaGTTTGAA
GATTAACGAAGACAATATCTTTGAATTTCGTCAGATTATGTTGAGAATGA
AGATTGAAAAGATCACCCAACGTAACTTAGGGGAAATGACAATCAATATT
GTTAGCCATGGACCTGGTGGGATGTATAAAACTGTTTGAatttaCGGACT
TTCCGGTCAAATACCTCAGTCATAGTGAGTTTGAAATAGAGGACGGAAAA
GTGTTTGATACAGTTGAAACTTTAACGAAATTCAAATCATTGGAACGTCT
TGATATTGATTGTCACTGGTCGTGTTATGAGCTCACGTTAGATGAATTCG
CACTTTTCCAACATTTGCCAGTatatttggttgattttggaaGTTTGAAG
ATTAACGAAGACAATATCTTTGAATTTCGTCAGATTATGTTGAGAATGAA
GATTGAAAAGATCACCCAACGTAACTTAGGGGAAATGACAATCAATATTG
TTAGCCATGGACCTGGTGGGATGTATAAAACTGTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000188_pilon | genome | sc0000188_pilon:249735..254015 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 172-519:3934 |
| Aaloc | 1-168:1 |
|
