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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000348_pilon:268728..273109- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_023700 ID=XLOC_023700|Name=XLOC_023700|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4382bp|location=Sequence derived from alignment at sc0000348_pilon:268728..273109- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGTATTAAAAACAATATTCAAAGGATCTATCTCAATTACAGCAGT
GGTTTTAGGCATCAAATTACAACATGATCGGCTCTCCACCAATCACATTT
TAACTGCTAAGGAGACGCCTAAGTACACATTGGAACATGTACAGTTAGTA
TTCAGACATGGTGCGCGTACACCAGTGTGCACATATGATTTGCCTGGTGT
TGAACCAGCCGTTTGGGACCCGGAAAAATTCCTTGGAGATTTACCACATA
CCAATGTTGACTATACTTTGAAGCTAGTTTCCACTGGAGAAGAAGTTTTA
CTCGAATCTATCGACCCTTCAAGTTGGTCCAAAAGACGTTTGAAGGTAAG
TTCTATTCTCTTGGATTTATCTTTTTGGCCAACACTATTGAAATCTAACA
AAAGAAGAGGTCTCACTCCAGTTTTAGTGCGCCAGCATAAGAATTGAGAA
TTTGCCGTTTATTTTGACGGTATACAATGACGAACTTTAAATTTTTGGAA
CTAAAATCGTGTTCAAGTAACTTTAATCTTTCTGAATCAAAGGGTGGAAT
GCAGACAGGCAAACTGACAAAGAATGGACAACAAATGGCTTTTGATGTTG
GACAGCACTTACAAAAAGAATACATCCAGGAACGGAAATTCATCTCCTCT
ATATACAGTCCTAATGAAATAAGGTAACATTACAACACTTAATCCTTGAA
AGATTTACCTAAAAAAATTTCTTTTGAAAATCTTGTAGTCTCAAATTTCA
GGAATTACCATTTTGCATAACTGTGTAGAAAATCTGAAAAAAATTATCAT
TGATTCTTGGTTGGTTAAAGAATTACATTTTTCTTTTACTTCTAGAGTTC
GAACGTCATCTTTCCAAAGAACGGTTGGAACTGTAAAAAGCATGCTAGCT
GGGTTATATGGTAAAGATCAAATTCGAGGTAAGACTTCGTTTTAATTTAA
AACAAAAAATTGATCAGCGGGAGGTACTTCAAATTGGAATGGTGGTATTT
CGAAGACGTTGAATCGCAGACCTCTACAAAACCGCAGGTGGTATATATAA
GGAGCACGAATCCGTTAGTGCATACCAACAGCCTAAGAAGTTGACGAAGG
CTTACTCCGAGGAACGATCGCAGACACCTACTCTCGGGTACCTAATAGCC
GGGGGGTTGGAATAAAAATGTCCCGGGTGGAGATTTTTTGAAAAGGAGGC
TAAAACAGCAGAATTGGGACAAAAAAGGGAACCTTTAAAAACATTTTCCC
AAAAATCAATAAGCGAGGGGGTTGGAATAAGAATGTTCTGGGTGGGAAAT
TAGGTTATTAGGTACCCGAGAGTAATCTCGAAGGGCAGTAGGGATTGTTT
TCACTCTCGCGAAGGGTCCATGTTTCTGGCGCATATGTGGCTATCTGTAG
TAATAATGCTTTGTTAAGGTTAATTTCCTTTCTTCATCTAGAACCAATCG
AGATGTGGACGGTACGCTCTCAAGAAGAATATCTTTATCCTAATTTCTAC
CAATGTCCAAACCTCAATCGTCATTTCAAAGTGGCGAAGAAAGACTTCAT
CAATTTTCGACCAGATATTAGGGAGATAACGATAGATATCAACAAGAAGC
TTGGACTTGTGGAGAAGGAGCAAATGATCGATGTTTTCCACCTTCTTGAT
ATCATGCACACTCGAGAGGTTAGTGAACTTCTTTTGGCTGGTTAAGGTCC
TGAAATTCGATCGTTAAAAGAGAGCGAGAGAGAGTTTTAGCATTTGGTGT
TGAATCGTGGTTCGAATCCCCGCCCCGTGTGGAACGCCCCCATAAAAACA
ATTGGAAGACTAAAAGTTTTAGATTATCGGATCATCCGCGTAAAATATCT
GTCTACATAAGACTTCACGAGTACTGTAACATGGTAGTATATAATGCACC
ATGGACTTTAACAGCTTTTAACTAAATGAGGCTGGACTTAAAAAAATGTT
GGTTTGCCGTCAGCCGACTGACTCTGACCTTTTAATGCTATTTCGACGAA
GCGAATTTTTTTTCTTCAAAAATTACAAAATGTAGACAAAAATTCCATGA
ATGACCAAAATAAAAAAAATTTCCTGCCGACCAACCCACCTCCTAAATCT
AGGGTCGGGTCACTGCATGAAAAACTGGGATTTCCCAATTCTGCACTGTA
CGTAAATTTGATTTATTTTGGCATTTCCCAGTAGAAATATCATTTCTTGG
AAATATGATATTTCTTTTGTAGTAAATATAAAATAAACACATGTTCATTC
ATATTTTCACTTGCCAAAATTTCACATTCAGACATTTCCTCAAAATAAAT
GCCATATTTACTACAAAAGTAAACGCGACAGAAATTTCACATTTAGACGT
TTTCTGACCTTTCTCAAACGGATTTCTTCAGATTTAAGAAAACCGAAATC
CCAGTTTTTCATGCAGTGGGTGATGGCAAACCAAGAACTTCTTAATTCCA
GCCTGAATTATGCACCAGTAGAGAATTTTTGAGGTCATCGAAGGTAAAAA
ATATAATAATTCATAGTCCATAATTTCAATTTCATATCAGTAATCACTGC
TTTTCGAAGCTTAGAGAAGCTTTTAGACGATATTTTTACTGGTCTATATG
TGGAAGATGAGAGCAGCTCCCACTATTAATTAGCAATTATCTTTTCATTC
TAGGCACATGGTTTCAAAGCACTTCCAGATAATTTAACAAAGGAAGATCG
TCAAAAAATCGAAACAGCGGCTTCTAAACTCTTCTCTTTTATTATACAAG
GGGATAACGACAGGTGAGTGTCTTGTGAATAATCCCTTGGCAAGACCGGC
GAAAACACTCCGCTCTCGAATGCCTTAAGGATGGAAATGTTGTAACGGGC
ATCGAAATTATAGATAAAAAAATTATAGTTTCGGGGTTGGAACTTGGAAA
AAAAAATATTGGTTGGAAATTTGAAAAAATGAGCCGTCTGGAAAAATTAA
GGCGAAGATAAGTATACGGAGTGGATTAAGTGCCTTAAGTTGAAAAACGA
AAAAAATGACAGAACACATTCTTAGCGTTATCTACTGAAATTAGTACATT
GAATTCTGGGAAAATGTCATTCTGCTTCACGTTCAATAATTTTGTTTTTC
TTTTCAGAAACATTTTGAGACTTTCAGTTGGTGCATTAGTAGAAGATCTT
TGTCAGAATATCGAAGAAAAAGTTAAAAACCCTAAGAAGTACGTATAATT
CACAGTACAGTAGTTTTATCTTTGGTGAACAACAGACAAATTTTCGTTCA
TCCGCGCTAATCGCGATTTAATTCGGATTTAAGCTAATCGGCCGCTAATC
CACTTTTGAACAACCGGGCCCAGACTAATATACTTAAGTTTGAAAAGGCC
TCAAAAAATTACTAAAAATCTGAATATTAATTGTGCTTATCGTATGCCAC
AAAATTTGCCCGTCTTAAATTTAAAGTATTTTCATCCTTAGGGTACATAA
AATGGAGTTCGTTAGTGCGCATGACACGACTTTGCAAGGGTTGCTAATGG
TTACAAATCAATGGAAGGACGAATGGCCTTATTATGTATCATTGTTCAAA
ATTGAACTCTATAAAGATGAGGTATGGTAATATACCATAATGTTATTTTG
AAGTAAAATGTTTGATTTGACTCACATTCCTAGTAGAAGATTATCGACTC
TGTTTGCCAACATCTACAGATATTGCAAATTTCATTGCACACGTTTTACG
TGTGATACACTGTGGTACTGAGTAAGAACGCTGACCTTTATATACCCTGA
ACCAAGTTTCTCAACTCCGGCCAGGCAAAATCTTTGATCGGTGTTTTTTG
GTACCCTAATGGTAGCACTAGTAAATAGTGGTGTAAATGTATCGAGATCG
CTAGATCTACTCTTCCTCTAACACTTTTGATGATGTAGCGCCGTTTGAGG
TTAATTTTTAACACTGCAATGGCTTCTTCAAAAAACCTTTTATCAAAGAT
GGCGGATGTAACTTTGTCCAGGGTATATAAAGGTGTACCGCTGAGTAAGA
AGCATAAGGTGAAACTTCGTTTAATATGTTTATACTATTCAACTTTTTTA
TCTTTTCAGGCGTCTGAATATTACGTTCGTCTTGAATTCAACGGACAAAC
TATTTTTCTTGACCAATCACAACATGAGGAAATGGTGCCAATTAGAACGT
GAGTTATTTAATATTTCTCTTCCAAAAATTCAAAAACGAATGTGTACACT
TTCCTACTTGTTTTCAATTTTTGCATATTGTTGCTTGCTTCAGCTAAAAT
TCAAGTAACGAAGTGAAATTCAAGTAATTGAAGTGATCTTTCCCAATATT
TTCTTACAGATTTTTGGAAAAGATGGAGAAATTTCGCGTCAAAGATTACA
AGTTGGAATGTAGCAAGGAAGAAGGAAAGTAG Coding sequence (CDS) from alignment at sc0000348_pilon:268728..273109- >XLOC_023700 ID=XLOC_023700|Name=XLOC_023700|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2538bp|location=Sequence derived from alignment at sc0000348_pilon:268728..273109- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGTATTAAAAACAATATTCAAAGGATCTATCTCAATTACAGCAGT
GGTTTTAGGCATCAAATTACAACATGATCGGCTCTCCACCAATCACATTT
TAACTGCTAAGGAGACGCCTAAGTACACATTGGAACATGTACAGTTAGTA
TTCAGACATGGTGCGCGTACACCAGTGTGCACATATGATTTGCCTGGTGT
TGAACCAGCCGTTTGGGACCCGGAAAAATTCCTTGGAGATTTACCACATA
CCAATGTTGACTATACTTTGAAGCTAGTTTCCACTGGAGAAGAAGTTTTA
CTCGAATCTATCGACCCTTCAAGTTGGTCCAAAAGACGTTTGAAGATGAA
AGTATTAAAAACAATATTCAAAGGATCTATCTCAATTACAGCAGTGGTTT
TAGGCATCAAATTACAACATGATCGGCTCTCCACCAATCACATTTTAACT
GCTAAGGAGACGCCTAAGTACACATTGGAACATGTACAGTTAGTATTCAG
ACATGGTGCGCGTACACCAGTGTGCACATATGATTTGCCTGGTGTTGAAC
CAGCCGTTTGGGACCCGGAAAAATTCCTTGGAGATTTACCACATACCAAT
GTTGACTATACTTTGAAGCTAGTTTCCACTGGAGAAGAAGTTTTACTCGA
ATCTATCGACCCTTCAAGTTGGTCCAAAAGACGTTTGAAGGGTGGAATGC
AGACAGGCAAACTGACAAAGAATGGACAACAAATGGCTTTTGATGTTGGA
CAGCACTTACAAAAAGAATACATCCAGGAACGGAAATTCATCTCCTCTAT
ATACAGTCCTAATGAAATAAGGGTGGAATGCAGACAGGCAAACTGACAAA
GAATGGACAACAAATGGCTTTTGATGTTGGACAGCACTTACAAAAAGAAT
ACATCCAGGAACGGAAATTCATCTCCTCTATATACAGTCCTAATGAAATA
AGAGTTCGAACGTCATCTTTCCAAAGAACGGTTGGAACTGTAAAAAGCAT
GCTAGCTGGGTTATATGGTAAAGATCAAATTCGAGAGTTCGAACGTCATC
TTTCCAAAGAACGGTTGGAACTGTAAAAAGCATGCTAGCTGGGTTATATG
GTAAAGATCAAATTCGAGAACCAATCGAGATGTGGACGGTACGCTCTCAA
GAAGAATATCTTTATCCTAATTTCTACCAATGTCCAAACCTCAATCGTCA
TTTCAAAGTGGCGAAGAAAGACTTCATCAATTTTCGACCAGATATTAGGG
AGATAACGATAGATATCAACAAGAAGCTTGGACTTGTGGAGAAGGAGCAA
ATGATCGATGTTTTCCACCTTCTTGATATCATGCACACTCGAGAGAACCA
ATCGAGATGTGGACGGTACGCTCTCAAGAAGAATATCTTTATCCTAATTT
CTACCAATGTCCAAACCTCAATCGTCATTTCAAAGTGGCGAAGAAAGACT
TCATCAATTTTCGACCAGATATTAGGGAGATAACGATAGATATCAACAAG
AAGCTTGGACTTGTGGAGAAGGAGCAAATGATCGATGTTTTCCACCTTCT
TGATATCATGCACACTCGAGAGGCACATGGTTTCAAAGCACTTCCAGATA
ATTTAACAAAGGAAGATCGTCAAAAAATCGAAACAGCGGCTTCTAAACTC
TTCTCTTTTATTATACAAGGGGATAACGACAGGCACATGGTTTCAAAGCA
CTTCCAGATAATTTAACAAAGGAAGATCGTCAAAAAATCGAAACAGCGGC
TTCTAAACTCTTCTCTTTTATTATACAAGGGGATAACGACAGAAACATTT
TGAGACTTTCAGTTGGTGCATTAGTAGAAGATCTTTGTCAGAATATCGAA
GAAAAAGTTAAAAACCCTAAGAAAAACATTTTGAGACTTTCAGTTGGTGC
ATTAGTAGAAGATCTTTGTCAGAATATCGAAGAAAAAGTTAAAAACCCTA
AGAAGGTACATAAAATGGAGTTCGTTAGTGCGCATGACACGACTTTGCAA
GGGTTGCTAATGGTTACAAATCAATGGAAGGACGAATGGCCTTATTATGT
ATCATTGTTCAAAATTGAACTCTATAAAGATGAGGGTACATAAAATGGAG
TTCGTTAGTGCGCATGACACGACTTTGCAAGGGTTGCTAATGGTTACAAA
TCAATGGAAGGACGAATGGCCTTATTATGTATCATTGTTCAAAATTGAAC
TCTATAAAGATGAGGCGTCTGAATATTACGTTCGTCTTGAATTCAACGGA
CAAACTATTTTTCTTGACCAATCACAACATGAGGAAATGGTGCCAATTAG
AACGCGTCTGAATATTACGTTCGTCTTGAATTCAACGGACAAACTATTTT
TCTTGACCAATCACAACATGAGGAAATGGTGCCAATTAGAACATTTTTGG
AAAAGATGGAGAAATTTCGCGTCAAAGATTACAAGTTGGAATGTAGCAAG
GAAGAAGGAAAGTAGATTTTTGGAAAAGATGGAGAAATTTCGCGTCAAAG
ATTACAAGTTGGAATGTAGCAAGGAAGAAGGAAAGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000348_pilon | genome | sc0000348_pilon:268728..273109 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1198-1269:73 |
| Aaloc | 1108-1194:324 |
| Aaloc | 979-1107:941 |
| Aaloc | 898-975:1275 |
| Aaloc | 787-894:1730 |
| Aaloc | 562-786:2940 |
| Aaloc | 478-558:3537 |
| Aaloc | 346-474:3841 |
| Aaloc | 1-345:4383 |
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