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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000429_pilon:52683..58048- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_023647 ID=XLOC_023647|Name=XLOC_023647|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5366bp|location=Sequence derived from alignment at sc0000429_pilon:52683..58048- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTGTGCTTTGGTGTTAACACTCTTGTTGGCCCTTGTTTCAGGTTC
GTACTGCTGCCTTTTTTTGTTACAGCCCCTGGGGCCCGGGGGTACTAGGG
TTGCGAGCTCACGGGGGGGGGGGGGGGTGCCGCCCGACTTTTGACCCTCG
GACCCTTACTGGGACTAAAAAGGAGAAAACAAAAGAAAATTTTGTGAATT
TTACGACACTTACCGGGATAAATTTGACCATTTTTTACCAAATTTCGATC
TTTCTGGGGGCAAAAATTTGAAATTTTCCTAATTCTCCTACCCTTAGTGG
GACTGGAATTAGATTTTCTGATTTTTCCGACCCTTAGCGGGACCTTGGAA
ATCCAAAAAAGGTACCCTCAAGGGCGGTTCATACCGTACCCTCCATTTGC
CTAAGTATGCCCCCTAGGCTACCCCCCCCCACCGGGGGTCTGAAGCTGTC
TACTGATCTTGCAAAAGCAAAAACCTGTACCGAACTCTTCTTCGACACAC
GTCAAGTTTTTCAAAATATAAAAAATGCCCGTGGCGGCGAGATCATTCAG
GCTAGCAAAAGCAATACAATCTTCTTTTTTTCATCGGAAATGCACACGGT
TGACGCTCTCGGTTTTTGGTGAAGATTTTAAATCCCATTCTCTCCATTCC
ATTTAAAGCATAAAAAGACACTAGTACCCCGTCATTGATGGAATTACTTA
TTCAAATTCCACGTCAAAATAAAGTTAGAGAGCATCAAAAATTAATATCT
TTATCATTCTAAGAGCTTTTGATGAGCAAGCTAAACCAGAATTTGTGGCG
ACGGGGGCCGTCTAGTTCGTTTCTATTCTTACTCAACAATTTTTATGCTA
AAGGATCTAGATTAATGGTCTGTTTGATCTATAAAATGTCTGATTATATG
GAATTGCCGAGGAATACGGGATGGGAAAAGTTACCTAGCTCTCTCTACCT
TTTTCTCTCACTATTCTTTTTTATTTTACTTTTTCAGCCTCCTACCAACT
TACACAACAAGAAAGAAGTAAGATATTTCTGACGATTTCCATGAAAAACT
CTGAGTAATTTTTATCGCAGTGACATTGAAAATGTAACCCTGATAATTTT
GACAGATATGATAAGAGTATACACTGATTCAGCAAAATCCACTTAGGGGC
TATCTTCAACCAAATCTCAAGCTAGCTATCTGTTCCTAACTGACAAAAGA
ATAAAAAACTATGCACAGGCCCAAACGGAAATATTTGAAAACTTTGAGCA
ATCAAGGTACTACTAAATCAACCTGTACATATTCTCTCTACCATTTCTTA
CAAAGATGGCTGATCCTGGGGTGAAAATAACGTCACATGGAATCATTCTA
TTGTACTATTGTAATTGTAGTATTTTTCAGTTTTGCGCGTTTCAAAGATC
TATAACCATTTTGTCTAACTTTGCTTAGTTTGTTCATGAGAAGTTTTTTT
TTTGAATTTTCTCCTTCAGACTTATGCTTGAACGTGCATAACAAATTACG
ATCATTACATCAGAATACGTCACCCCTTGTTTACGATGTCTCCTTGGAAA
CGCAATCGCAAAAATGGGCCGACCATCTTGCGCAAATCGGACGCCTGTCC
CATGATATGAATTCAGGTAAGTCTCGTACCCAGAGCAGCTATTAAACTAA
GTGGCTGGGTATGTGTACAATTAGGATTTTCCATAAATAGTCCGTGCCCC
CCTGTTGAGGATATCGTATATCCAGGGGTAAAGTGTCTTTTCAAGTAAAA
AATACGATAGGGGGTATGCATCTTTATAAGAGAGGATATCCAGGAAGTAA
GCATCTTTATAAGAGAGGATATCCAGGGGGTTGGAAAAAACAATATCCTC
AACAGTGGTGGTAAATTTTTTTCTTCTGGAAAAGCCCAATTTTGGTATGG
CTGCGAAAATTTCCCAATTTTCTGAAAATTTAGGCTTGTATTTCTAAAAA
GATTTTGTGAATGTGCGAAATTTTGGGTCATCTGGGGCCTCTTCTTCAGT
GCCCATCAGAAACGTTATAAAGCCTCGGAGAAATAAATACCTTTTTTAAG
GTGTTGGAGAGAATTTATATTGGAGCCAATCATGGAGAAGTTCAACCAAA
GGTGACAGCAGTGCCAAAGCTACTCTCGCGTGGTATGATGTTTTAAATTA
TTCCTCTGATTTACTGGTATAACTAAGAAGATGAAATACTGTATACATTC
TTCTAAAAATTTAGGGTGTATGCCACTTCCGGGGGGGGGCACTGATATAA
TCTGGCCTACGTCATGTGCGCTTAAGGGTGAGGTTTTTCAGCATACCAAA
ATGCACTGTAAGGGTGTGTTTCTGTGAGAGATTGCACTGTAAGGGTCGAA
TTTTAAAACAAATTCAAAATAAATGATAAAAAGAAAGGTTTGTTTGAAAA
AGTTTCTCTTGTCTGATAATTACAGCTGACAAGACTAATTTTCTCAGTTT
TTCTTTGAAACAGATAACTTCCCAAGCTTATTTTATCACGCAGATTTACA
GCTGAAAAATATTGTGCACTATAAGGGTTGGGTAAATCATGAGAAAATGC
AATGAAAGGGTACCTTTTCAGCCATATTGAACTGCACTGTAAGGGTGCGA
TTTTGAAAAGCAGATTTTGCGCGGCACATACCGTCGTTTCGAAATCGAGT
GCCCCCGCCCCGGGATGCCTCTAATTTTCAATTTAAAGAATAGATCTAGT
GGCAATCTCCTGGCCTATTCGGATGCTTTCGAATAAAACACTTGATCATA
ATATCATGAATTAAAATATGTATTTTTATTGGCAATCTTCAATTCTTTTT
TGAAATACAGCACTTCTTAAAACTGACTTCGCCCTTGAGTGGTGACTCGA
GGTTTTAGAAATTAAATAAAATTAAAATCTCATTCAATAACAGGTATGAA
GAAATCAAGGATTATAGTTTTTCATCTCATCAGTCAACTAATGGAAGAGC
TGTCGGACATTTTACACAGGTATCACCTCCTTACTCCAGATGAGCATAAC
TCTACTTTCTTTATGACTTGGCATGGTTAAGTATCTAAAGCTGGAAACCC
ACCATTAGAAGAAAACATTTGATTTTGAAGAGATGATTCCTTATGAAAAC
CTTTTTTTAACCAAAAATGAAAACCTCTCCTACACTCCTGATTACCCCTG
GTTCGTTTTGATCTTGAAATAGGTTATAATGGTGCTCAGGTATCACTTCG
TTCTAAAAGACCTTCTTACCTATCATTCTATATGTCAGGCTGTGAATTTC
GACAACATTACTAATAGATATTGACCAACAGGCTGCACGTTAAAAAAAAA
ACAAGTTTTACGAAAATAGGGGTTTATATCAATCCAGAAAGATTATGTGG
TGTGGTAATTAAGTGGTAACGTCATTTAGTACTTCTAATTCTTGACCAGG
AAAGTAATGAATGATTTTTCATGACTTTATGTAGTAAAAATAATAAATAT
TTCAAGATATTTCCTTGGGTCAGTAATTTAATGGAGAAAAGAATCGAGGG
GCAAATCACTAAAATAAATCTCGTACACAATTTTATAAATCAAAAACAAA
TCCTAAATCTCGTACATCATTTTTCGAGTGATTTGCCCCTCGAAAAGAAT
AACCAGAATTGCATGTTTTTATTTAAAAACTATTCGACCTTAGATCAATG
ATAGATTACCTAGATTTTTACACTCTGATGATGACCTCTTGTAGACTTGT
AGTGAAGGTCGAATATATCCCAGCTGGCACACAACGTTATTTTAACGTTC
ATCTAACGTTAAATGGACGTTATGAACGTTAGATAAACGTCGAAAAAACG
TTGTGTGTCAGCTGGGATATATATAATATTTTTGTTTATAAAACCATGAC
GCTTCTGGTTATTCTTTCCACCAATAAATAATTTGTAATTCAATCTTTCT
TATAAAGTTAATCTGGAAAGAGACCAAGAGCCTTGGTTGTGGAATCAAGG
AGGTCCGTAAAAGTGGCCGTATTGAAACCTACATTGTCTCCAGATACTCA
CCAAGGGGAAATTCCATTCGCCGAAACTGGGGTGAAAGCTCAAGTCAAGC
AAGAATTAGAGTTTATGGTGCTAATGTTCAAAAGAGAAATATTGGAGGTA
AATAAATCTGCTTTGACTAAATACACGGGTTGCAAAATTATATCAATGCA
GTCAAAACATGTGATTACTTTACGTGATTTTATTCCCATGTTACTTGCTT
TACAACTTCCAGCTGAGAACTTTATTAGTGTCAATAAATTCGAACCAATC
AGAAATAAATGTCATGTAACAAGTACATAAAAATTTCGAGTAAAAGCGTG
ATTTGTCTTCAGACGTTCATTTTGCAACCTGTGTATTAAAGGTTTCAGTT
TTTCTCCAGAGATATCGAGGAAAAATGGCTTATTATGTACCCTGAGTATC
AGGGGTTAAGTTTTCAAAGAATATATTAACCTCTGAAATAATAGACAGAC
TTTATATTATGATTCTCTATCACTGACTCTTTTTAAAAAGCATTGATGAC
ATTGTTGAGTTGTGTTTTCAACGACGGGAATATAACTATCAACTTTGAAC
TTAATCCAAGATCTTGGATGGTCGTCATGGTTACTTTTCTCTGCGTTGAT
TGCGCGCTGAATAGAATCTCGATTGGTCGGCACAGGTCAATATATGATTT
TGGCCTGTGCTTTTCTAGACAGGAGAACCGTCGTGTGTTTTTTTATAATT
TGATGTACACAAGACGGGTTCGAGCTGTGAGTCCAATATTGGACTCACAT
TTTTTACAGTAGGAAATTCGAATTTAGCGCTGTCTTCACTTACTAAAATA
AAAACCAAATTTCGAAACTTGCGCTTTCTCTAAGAAAGTGTGACCAGTAA
AAGAATAACAAAATTTGATTGGCTATGTTTTCAACCGTTATTAGGATCTG
AGAAATTCAAACTCTCAGCCCATACCATGCTATATATTTCGCCATCAGTT
TATCAAAGAAGAAATCATAGTATGGATTCCCAGGCTAGTGCTTTTCACGG
TACTGATTATGGTCAAAAGAATTCAATGCTTCAAAAAAGGGGATCCTGGC
TCCCTCCCTCAATGTTCCGTTCAGATTTTAGCAAACTTGGCCGTTGACCC
GGCGAAACTAATTGAAAAACTATCTAAAAGTATAAATTACTCGATCGGCT
ACCAACGTAAAATATCTTACTGAAAACTAGGTGCAATTAAAAATTATGTG
CAGATAATATTCTCCCGTAGTTTCAAACAACATCGTAGCAATCAAATTAA
ATATCATCTTATTTTTATATCTAGCTCAAACGCCAACACTTCCAGAACTC
GAGAAATTGACTGGTGGAAGTGGAACTGGACCTATCCCAACAGGTGGACC
ACTTCCACAAACCACC Coding sequence (CDS) from alignment at sc0000429_pilon:52683..58048- >XLOC_023647 ID=XLOC_023647|Name=XLOC_023647|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1326bp|location=Sequence derived from alignment at sc0000429_pilon:52683..58048- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTGTGCTTTGGTGTTAACACTCTTGTTGGCCCTTGTTTCAGATGG
ATTGTGCTTTGGTGTTAACACTCTTGTTGGCCCTTGTTTCAGCCTCCTAC
CAACTTACACAACAAGAAAGAACCTCCTACCAACTTACACAACAAGAAAG
AAACTTATGCTTGAACGTGCATAACAAATTACGATCATTACATCAGAATA
CGTCACCCCTTGTTTACGATGTCTCCTTGGAAACGCAATCGCAAAAATGG
GCCGACCATCTTGCGCAAATCGGACGCCTGTCCCATGATATGAATTCAGA
CTTATGCTTGAACGTGCATAACAAATTACGATCATTACATCAGAATACGT
CACCCCTTGTTTACGATGTCTCCTTGGAAACGCAATCGCAAAAATGGGCC
GACCATCTTGCGCAAATCGGACGCCTGTCCCATGATATGAATTCAGGTGT
TGGAGAGAATTTATATTGGAGCCAATCATGGAGAAGTTCAACCAAAGGTG
ACAGCAGTGCCAAAGCTACTCTCGCGTGGTGTTGGAGAGAATTTATATTG
GAGCCAATCATGGAGAAGTTCAACCAAAGGTGACAGCAGTGCCAAAGCTA
CTCTCGCGTGGTATGAAGAAATCAAGGATTATAGTTTTTCATCTCATCAG
TCAACTAATGGAAGAGCTGTCGGACATTTTACACAGGTATGAAGAAATCA
AGGATTATAGTTTTTCATCTCATCAGTCAACTAATGGAAGAGCTGTCGGA
CATTTTACACAGTTAATCTGGAAAGAGACCAAGAGCCTTGGTTGTGGAAT
CAAGGAGGTCCGTAAAAGTGGCCGTATTGAAACCTACATTGTCTCCAGAT
ACTCACCAAGGGGAAATTCCATTCGCCGAAACTGGGGTGAAAGCTCAAGT
CAAGCAAGAATTAGAGTTTATGGTGCTAATGTTCAAAAGAGAAATATTGG
AGTTAATCTGGAAAGAGACCAAGAGCCTTGGTTGTGGAATCAAGGAGGTC
CGTAAAAGTGGCCGTATTGAAACCTACATTGTCTCCAGATACTCACCAAG
GGGAAATTCCATTCGCCGAAACTGGGGTGAAAGCTCAAGTCAAGCAAGAA
TTAGAGTTTATGGTGCTAATGTTCAAAAGAGAAATATTGGAGCTCAAACG
CCAACACTTCCAGAACTCGAGAAATTGACTGGTGGAAGTGGAACTGGACC
TATCCCAACAGGTGGACCACTTCCACAAACCACCCTCAAACGCCAACACT
TCCAGAACTCGAGAAATTGACTGGTGGAAGTGGAACTGGACCTATCCCAA
CAGGTGGACCACTTCCACAAACCACC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000429_pilon | genome | sc0000429_pilon:52683..58048 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 574-663:91 |
| Aaloc | 382-570:1460 |
| Aaloc | 307-381:2473 |
| Aaloc | 226-303:3315 |
| Aaloc | 79-222:3896 |
| Aaloc | 49-75:4378 |
| Aaloc | 1-45:5367 |
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