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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000292_pilon:55647..62035+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_023437 ID=XLOC_023437|Name=XLOC_023437|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6389bp|location=Sequence derived from alignment at sc0000292_pilon:55647..62035+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGAAGAATTCGccaaactttgttttgaaacacTTTTGGAATTTTC
ATTCTTCAAAGAAACTGATGACAAAGGTAAGTGGTATTCGGTCACGTAGA
ATTGTTCGAATAGATAATAAAAACTGGATGTGTAACTGGCTCTGGTCTCA
TCAACGCATGAcataaaaggttttgtttttatataagagtgatatcgttt
gcttactcgtcagttttaattcacaagctttttcacattggattgatacg
aatgtggagcaagattgttgagaaagaggaaaaggaaaacatttttctgc
ttatatcagcataatataacaataggtagacactgtcctgatatgaaata
tgtgtttgatatgaaacggggacacttatataaaataaaacctttaatat
tctttcatttcagaAGAAACACAACTTTCGCGACTGGCATTGAGTTCATT
GATGCAAAGATGTCGCGATGTTCTTTTGAAGTATGCCGAAGATGAACGAT
TGAACGGAGAATTTCCACTACCTAGGTTTGTTCCTTTGATTTCCATTCTA
AGGCGACTctccttttcaaattcaattgcCAAGGTTTGgtcttctttttt
cttccattttcttATGACTTTCACTGCCAGtttttttATCGTTCTTTTGG
TTATATAAACCTCTTGAAAAATATGACCGTAAGCTTTTATAATAACATAA
ACACAGGTACACTAACGAGCAAACACACGTTGCACTAGTGTTTTATCGCT
GGATGTACATTGCATTTAAATATCTAATAAATATTAATCAACATGACTTC
GTAAAACATCAAATATCGTGAATCTAAATTGTTGGCAGTGTAGCCTCTAC
CATCCTGCCCATGAGACACAGAATCTTGCCTAACCGTAACAAACCGAACT
TTGTGACTTGcattcactgacctttatatatctctggaccaagctatatc
cgccatccttgatcgaattttttttgaattggtacccgcaaagaagtcat
agtgttaaaaattaacgtctaacggcgctacatcatcaaaagttttcgag
ggaaagtagatctagtgctctcgatgcatttacaccgctactgagtagtg
ccgccattagggtaccactttttaaaaagctccgattaaagattttttgg
ttggccgggatataaaggtcagtgcttaCGTTGtcttttcagtcagcgaa
gaGGATTTTGGTACAGGCTATAAGGGAAGAGGTTTTAGATATTATAAGTG
CGAGGATCAGTTTAGGTTTACGTATGAATTGATATTATTTTTGCGTTTTT
GCTGCTTAGCAACGAAGTTTTAGGTTTAGTGGTTTTGAATAGGAGGAGAA
TTATTTTATTCACTGCTTCATTAAGAAAACAATATTTCGTAGATTTACAA
ACTTAATTTCACAGACTTTTCCTAGTTTTTACTGAACTTTAAGGCAGAAG
ATTTCGAGGGGGGCTGTAAATTTCCAAGATGATTTTTGGACCCTTTTTGC
TAAAGTTTATGTCAAGTaagaaatttgacaaaaattcgcaaaaaaaataa
aacattcttCCTTTTGTGCTTtatgtttgttcttttttataaattttaga
tCTTTCTAAAAGAAATCACGAAATGAAATCTATTCGAAAAGAAGAATTCT
CGGGCGAGATTTTCAACCCGTTCTTTCCAAATCAATTGAAAGAACTTTGC
GTCATCGTGCAATTCTTGATTAGAAACCACAATTTCTTTTAGTAAGCTTC
AGTTAACATTATACGAACCAGTCTGTGGGAATAAGCTTAGACGCCAACTC
TCTCTGCTCACTGACACTTCCTCAGTTGAAACTGAAGGATTTCTGTTCCT
TTTATTTTCCTTCCTGTTTTTCCCGAACGTCAAAATGGTCCACAAAAACT
TGCGAAAACCAGGGATCATTTTTGCGTagatgaaaatgtttaaaatgttG
TTCAAGTAGTAAACGAACACCACAATTGGATAAGTTAATAGCCTGTAACT
ATGGATAATAGTTGAGAAATGAGGCTTGTAATAGTTTGCATAAATCACTA
GACTCCACCGTAAGATATCTAACAACCTCACCGGTACGACAGTAACGGCG
AAAATGAAGATAAGTCCGCTCAAAGTATGTAAAGCACGTCGATTCCTGAG
CCGGCTCAAATCGTTTAAGGAGAATTTGTTGACCTGTACTTCCTTGTGTA
TGGTTATCGATGACCTCCGATAAAAATAATACATCACTGCTAGTGGTACA
AAACTGTCCAGAAGGTATCTTCCTGCTGTTTCCGCTAAATAAGGCTCCAA
AGGGACATCGTATACGCAGCTCAGAAGGCCATCGTACACTTTCAGCTTTA
TATTCAAATGATACAAGTAGGGATAGATGGGTACGGTCCAGATTAGTAAA
CAAACCAAAGTGTATTTCCTTTTACCGATACGTGGTTTGAAGGGATGGAC
AATAGATCGGTAGCGAGCATATGAGATTATCATTAATAGCCAACAGGAAA
CCAAAGGACACATATTAGTCGGGAACGTGCCCAGAAAAACACATGCAAAT
TCACCCAACGTCCAAGGAGGAACATTGTATTGTGGGTAGAATATAGTGAC
ATTGAAGCTGGTGAATAAATCTACCAACGCCAAATTGATGATGAGAAAAT
GGTATGAACTCATCTTTCGTAAACCTCTCCTTAAACTCTTCTGCACGAAA
TAAATAATGATCAACAAATTCCACAAACTTCCGATGCCAAAAATAATGGG
GAAAATGTTGAGGAAGAAAGAGGCGACCGTGTTTTGTGCCCATTGAAACA
CTTTGTCTTCCTGTTGAAAAGTTGAGATCGTTGTCACATTGTTGCTGTTA
TTTGAATgcgccattttgaaagaaagttcGTAACTCTTAGCAACGTTTGT
AGTCTTGTAAAAGTTATATTGTTCAATTTCCAAGAATATGTCGACAAAAC
ATTAATCTCCGTTTAAGACTAAGTTCACGTAAGAATGTGAGATCAaacaa
atctcaaaatttgtcatttgaaATTCTTCGTGAAAGAAAAACATGGAATA
TATAGAATTGAATAAACAATGGAGAATCACTAAGATAAGTTATGAATGAC
AATCAAAACCGATCGCTTAGAAACATGCATACATTAATTGACAACATCAA
AATGTGAACAAAATGCAatagtaaaactttttttctttcaaagcaaaccg
CAAATTCGTTATTCTTCCACGGGGTGTTTTTTATAACAAATCCTCAAAAT
TGCAACACCACCAACCAAATTCCTCCAATGGGGACACACGAAACAAATCC
ACTCTTATAAATTTCCTCAGAACAGGAAGGGCATaaaaaaaGGTAGCTCT
GATTGAAAGTCTAAGTTCTGCTGCATTTATTAACCATTTATTAACATTTC
ACTTTTTTAGGGCACGGATGTTCGAAATCTCGTTTGCTATCAAAGCCATA
TCCACTTTGCTTTCGTCCTTCAAAAAGACAGTGGAGACACGACCAAATAT
ACGTAAGCTAGCTCTCATTACCTccatttttaatttaatcggattaactt
tcgcgagattaagTTTTGcgatttcgcaaatttttgccattttcgcgaaa
ttaaaacttgtgagattcctgactcgcgaaattaaaatccaccacaaaat
tttaaaaatcgcaTTTTCGGTGGATAAACCAGTCCTAAGCCTccttttgt
ggcaaaaatggctatttctcagctgttttcaggcttattcgcgaattttt
tcaaaactccgACTAGCAAAATTAAATCGAGAAAATTTGCCTCATAAAAT
TCCTCACATATAATAACAAAGAATCAAGTTATAGTCATTTAAGAGAATTT
CTTAGTTAGGATCTATAATGATTATCATCCCCACCGACAAAGATGAAGTT
GCGCATCTTAAATTTATCCGGAAGAATGTTAGAATCGGCAACCGCTAAGG
ACTacaatcatttttttataagaatggtgtaaatccaattcatcatggat
attcttaactttgttGAGAAAATCAtcctactcttgtctcccgaatagac
gtcactccccccccccccccccgctgaAAAATCCATCctcccgctcttat
taagaccccccccccccctgctgattaaattcgaataatttaatatttta
ttttagtgtggatagaccttaaacttgttaaaaaatttctttttgttagt
attggttcttattttatgtGTTCATTTGCTAaagtcttcaaattaccccc
gcCCTCTTAATCCATCCCTctcccgcttattagaatttagaaaattttcc
cacCCCTgcctattcgggagacaagagtaaaatattcttacagcaaaatg
acatttttgtgaaagactcacttaaagtctgtccagatataattggcagt
ggaaacaagaatgcctgtaacttttgatagtcaaatataattatggaaat
tttttttgcttgtttcagagaatcaaaagcgctattatttgaatgtattt
ttgttgaaaaattcccgatttttagcggttaaatttgcgattgtaaaaat
tgagcttttttctacttatgctttaacgttcatttttacaccagtggtag
ttcaacctcaggttaagaagtttgttaaatttcaaggcaaacaaaaaagt
ccttcggaagatatgggacccgaaataccccttgttagcacttttctgtg
aaatatcaaatctccaacttattactaaaaacggtggtagtgatatgatt
gataaaacagtttttcgatcataacacgtTTTACGAtttctttaatgacc
tcatagccaaactgtgtttagtgttttgggaattagcaaagttctttaac
gacttaaaaataacaaaggcaatatcagttcatgcttatcctttcaataa
aaacaattatactgtgatttcacttcgtttcgaaataatcaatgatacca
ataataccaatgcaccaacacttaacattttccaacttttaattgcactg
ttcaaaaaagataacataacccccgtttttagtaataagttggagatttg
atacttcacagaaaagtgctaacaaggggtatttcgggtcccatatcttc
caaatgacttttctgtttgccttgaaatttaataaacttcttaacctaag
gttgaactaccactggtgtaaaaataaacgttatacagtggaacctctaa
ttagcggacaccatcggggaaaggggtttgtccgctaattagaagtgtcc
gccttttagaaacttttgatctcggagctccaattttgaaattaggccat
cccagggtgttaaaaatacaaaattggggtctaaagtacttatctgcaga
cactaggccaaagaagaacaagagaaaggttattaaaacagagctcgagt
gactggcaagaggttaaatcgaggtagtgggtacggacttgaagtaccag
tgatttatgattcCTTTGGCCTACCTAAATTGGTagttgaatgggtcaag
gggaactggaaatttgtagaaataatttgaataataagactaataagtgc
ttgaaataaaaatatctaaaaaaatttttttcgattttggacgtctgtgc
cccgtttgatattcaatgtccgctaattggagagctaaaataggggcttc
ggccatttcgtgcgaaaaaaaaatgtccgctaatcagagggtccgctaat
tgagtgtccgccttttagaaacttttttatgaggttttgactaggaaacg
gccggggaaaatgctattgtccgctaatcagaggtgtccgccttttagag
tgtccgttatttagaggttttactgtagcataagtagaaaaaaagcttta
tttttacaatcgcaaatttaaccgctaaaaatcgcaaatttttcaaccaa
aaatacattcaaatatagcgcttttgattctctaaaacaagcaaaaaaaa
tttccataattatacttgactatcaaaagttacaggcattcttgtttcca
ctgccaattatatctggacagactttaggggtaatttgacaatttataat
tgaaaatgctctaataatgacattcttagcttgagtagcaaaattccatg
gtgaaattcttagcattattcttaattttttggctatttttatcatggac
attcttataaagtgtattcttattaaaaaaacgtgtatcatttAAACGAA
CTTCAGTCGTATTatgtattgttttattttctcatttcagTGGATGCGAC
ACAGTGGAGTGAGGTGATTGGTTTATATCCAGTGATCTTAGAATGTGTCA
CGTGTACATCACATGACGTTCGAATCGCTCTCAAAGAAGCACTGTTGGAA
TTCCAAGACTTGCTGGCACCTCCTCACCCAAAAATGTGA Coding sequence (CDS) from alignment at sc0000292_pilon:55647..62035+ >XLOC_023437 ID=XLOC_023437|Name=XLOC_023437|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=858bp|location=Sequence derived from alignment at sc0000292_pilon:55647..62035+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGAAGAATTCGccaaactttgttttgaaacacTTTTGGAATTTTC
ATTCTTCAAAGAAACTGATGACAAAGATGAAAGAAGAATTCGccaaactt
tgttttgaaacacTTTTGGAATTTTCATTCTTCAAAGAAACTGATGACAA
AGaAGAAACACAACTTTCGCGACTGGCATTGAGTTCATTGATGCAAAGAT
GTCGCGATGTTCTTTTGAAGTATGCCGAAGATGAACGATTGAACGGAGAA
TTTCCACTACCTAGaAGAAACACAACTTTCGCGACTGGCATTGAGTTCAT
TGATGCAAAGATGTCGCGATGTTCTTTTGAAGTATGCCGAAGATGAACGA
TTGAACGGAGAATTTCCACTACCTAGGGCACGGATGTTCGAAATCTCGTT
TGCTATCAAAGCCATATCCACTTTGCTTTCGTCCTTCAAAAAGACAGTGG
AGACACGACCAAATATACGGCACGGATGTTCGAAATCTCGTTTGCTATCA
AAGCCATATCCACTTTGCTTTCGTCCTTCAAAAAGACAGTGGAGACACGA
CCAAATATACTGGATGCGACACAGTGGAGTGAGGTGATTGGTTTATATCC
AGTGATCTTAGAATGTGTCACGTGTACATCACATGACGTTCGAATCGCTC
TCAAAGAAGCACTGTTGGAATTCCAAGACTTGCTGGCACCTCCTCACCCA
AAAATGTGATGGATGCGACACAGTGGAGTGAGGTGATTGGTTTATATCCA
GTGATCTTAGAATGTGTCACGTGTACATCACATGACGTTCGAATCGCTCT
CAAAGAAGCACTGTTGGAATTCCAAGACTTGCTGGCACCTCCTCACCCAA
AAATGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000292_pilon | genome | sc0000292_pilon:55647..62035 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 283-429:6243 |
| Aaloc | 190-279:3412 |
| Aaloc | 79-186:416 |
| Aaloc | 1-75:1 |
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