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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000476_pilon:76244..80155- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_023392 ID=XLOC_023392|Name=XLOC_023392|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3912bp|location=Sequence derived from alignment at sc0000476_pilon:76244..80155- (Clytia hemisphaerica_ch_hm2_pilon)
ATTAAATTCGTTGATGAGAAGGAGATAATGAGCGGCAATGAAAAGTCTGC
GAAAAGAAGTAGGACATCCGTAGAGAAAGAAGATTATTCTATCGTAAAAG
TTTTGGATTCTAAAGAAATTGATGGTACTGTTTTTTGCGAGGTAAATTTC
TTTTTCATGTATCAGTACTCACCTCACCTATCAGTTCTCTGATGGCAGAC
AATGTGTCTTGAAAAAAGCACCCTTTTCTACCGCAGCTACGAGCCGTGTT
ACAAGATAAATAAAATGGGAGGGTGAGGCTTTCAATGGTTTAATTTATAT
GTCTATGATGTAATTTAGGGGCAACAAATTATGGGAAAAAGGGGAAATTG
TTTATGTAGTTGGAGGGAGGGGGTTTACTTTTGATGTAATTCATTTTCAG
ATTTTTGGTAAAATGGGGCAACTCATTATAAAGCACTGAAAAGTATAAAA
CTAAAACGAATACACTATAAGGGGTTCTGATAACTTCAAAGCAAAAATGT
TTCTACTTATGTATAATGCAAAATTTTGTTAACATAAGTTAAATGTTTTA
TTAAACCCTTTAAGTGCCACGGTCATTTTTTTCATTTTAAAGAAAATTGC
TAGTTCAAACTTTAAAGGCTTATATCTCGAGATCTAGAAGGAGTTAGAAG
CTTGTTCGTAGCTCGTTGGATAGCTTATAGTCTCCTCCTTCGGCGCCGCC
CGATTTAATTCGCTGGAGGACAGAATCATGTAAAGCAGGCCTAAATTTGG
AGGTTCTTGCAAACATTTGCATTTTTTTGATTTTTTAGCTTAAAATCTCG
CTGGAAAGACTCACTTTTGATTTTTTTTTGCTTGATCATAAAGCCCAATC
CAATTCCTACGATTTAGACCAAAAATAGCGATTTCCGACTCAAACTGAGC
ATTACAGGAGGGCTTCGCCCTCCTACATAGCCCATTTCTGATATATACGA
CATTGGCACTTAAAGGGTTAACATTAAATTACTATACTCTAATCTAGGTG
TTATGGAACAATAGCTCTACTTCTTGGATTCGGGAAAGCTACTTACCGGT
GATTATCAAAGAATTAGAACACGCGAAAATAGAAACTGTGGAAGAAAACT
TTCTTGGTCAAAAGAAGAAAATACAGATAATTTCCTTATCTCAACAAAGG
TAAAATTGACTTATCCTCTGACTTATCCCTGGAAGACATTACATAAAAGA
AATGTATCCATTCGATAAAATTTCACTTAGTCTTTCTGTCTAGTATGCAC
TGGCGAACTATTTTAGATTTCATATACTTTACAGTTTAGAGATCTGTCAT
GTAATTGAAATTGTGCGATTCATTTTATTTGAGGCAAGAAAGTTCTACCA
CGACTCCGAGAGAAATAGATGAAGCGGACTGTTCAGCTTGTGGAGAAACG
GCTGTAATTGGTGAAGAGAATGATGATGACGATGATGACGATGATGATAT
TGAGAGTACATGTAACACAGATAAATCGAAACAAAAAGCAAAAAATACTA
AAACCGCGGGTAAGATAAATTGATGATATGTTGAATAAACCATGTATTTT
TATTTGATTATCATGGGGGCGGTATCGGTGTCAAAGTATCTATTTTTAAA
GCTGATTGGGTGATTTAAGTTTACCACAATACTAGAATTTGTACAACAGT
TTTTTAAAGTTGGACATTTCCAAGAAACAATTATCAAAAAAATCATTTTT
TACAAAAACGTATGGGTAGATTAAAACGGACCTCAAAGTCTATCCACGAT
AAGTGTGCACTCTTTTTTCTTTTAACTATTACTTTTGAAGGAACCCTTCA
ATCTTTATAAATTTTGTATCCTTGGGTGGAACAATTTGAAATTAAAAAAT
ATTTTTAAAAATTTTTAAACTGAAGATGAAAATAAAGAAAAAAATAAAGA
TCTTGTAGAAAAGTGTTATAACAATCATTTTCACTGAAGTAAATTCTTGA
TCATCGAACGTCATCTCTGTGAAAAAATTTCTCAAAAATAATCATTTAGT
CAAAAGATATCAAACAAAGTTATAAGCTGATTGACATCTATAAACGCTGT
TTATTGCTGTTTTTTTGAGCCAATAACTTATTAACTTTCTATCATAACTT
TATATTGAATAAATATTTTAGTGAAATTTCTTCACAATGATAACCTCCTA
AAACCATAAGTGAGAATCGCCTATGACCATAACTGCAGGGAGGTAGGGAG
GGAGGGATTTAAAAAACTTATTTCATCATGTCAGCTTTCAGTTATAGCGT
CGACTTGAACAGGGAGTTGCGATGGCCATTATGAACATGACGTCACGAGG
GCAAATTATGGGCAAGTAGAGTAGCGCTTATCAAATAAAAGGTTAAACCA
CGATTTAACCTATGTTAAATCCAAATTTAACTTTCCATTTGCCTATGACC
TAAACTAGGGGTAGAAACCAATCAAGTAGTCAGACGGCTGAGAAATAAGC
GTGAGTCGATAGATATAAGTTTGGCGTGAAATTAAGGCTAATCCTCGAAT
AATAAACTTTCCTTTTTTCAGGAATACTGGCTATAACAAGTCCATGTGGA
ATAGTTTTGGATTTAAAAGAGCTTTATAACTGTGAGAGTAAACGGCAAGT
GTATGGCTGTCTATCTGACTTTCTTTCGGAGCATAGCATGATAGGTTTGT
TTGACATTTTTATGTTTTTTCCAGTAAAAAGACTTCCATTTCAAGGACCA
AAAAAATTAGCCTATCTATCAAAGGTAATGAAACTAACCCCTGGGAAAGG
ATTTTGAGGGTTCAAAATTTCGTTGAAGGCATTCAATGTTTTTAAAAATG
CAAATCTACATCTTTCAGGTCTGATTCAAATTTCACCTACATTCTCGGGG
TCAGGTGCTGTAGATTATTGACAATAGATTTTAACTCAAAGTATCCTTGA
AAGTGAATAATCCTCTTCCCATTATACATTACTTTAGAAACGATTGTTTA
CGATGATGCATGTCATTTGAAGCCTTTCGCCACCAACAAAATTAGGAAAG
ATCTTACACCATTGAGTAAAAGAATTGCTGGAATGGATTTTGCAGTTGAT
CGTTTTCATTTCAAAAACCACATTGGAGAATGGTGTCTTGAAAACTGCGA
CCCTGATATGGTTGCAAATTTAAACGAGGTATATACAGATTTTTATTTTC
TTAACTTGAGTATCAAGCCCCCTTAAAGTGGAAATTGAATTGTTAGAGAG
ATAACATCATCAACATAACTATTTAAGAACTTCGCAGAGATATCATTGAG
ATTAATGTGAAACCCTGACCAAGTCACAGTCATTATAATAACACAGTTAA
TAATACCAAGCTCACGATATTACTAAAAAATGATGTACAGTGAAACCTCC
AATTAGCGGACACCATCGGGGAGTAAGCAAAGTGTCCATTAATTTGAGGT
GTCCGCTTTTTGGAGACCGTTTTAGTGGCGTTTGTTAAAAAAGGGGGAAT
AGGTTGTGTTTGCTATTTAGACAGTGTCCGCTTTTTTGAGTCTCCGTTAA
TTAGAGGTTTCACTGTATATATACCGGGTATGCATAAAAAAGAAGTTAAG
CACAAATTTCAAGTTTTTACATGCGCTACTCTCTTCAGGGAAATAATCTC
AAATTTTTTAACAATTATTGCTGATTTGACCTTTTTATAATACTGCTGAA
AATTTTATTTAAGCCAATTTGTAATTTTTTATGCACATCCGGTAATAGGG
TTTAATTTCTTTACATTTAGGTCAACACCGAGAGCTGCGAACAGTTATTC
AGCTGGTTTTCATCGTTTAAGCACATGACCAAACACATGAAGCGCGAGAC
CTTCATATTTCTTACGTTGTATTTGATGGAAAGTCAAAATCAGTTGACAG
AAGAAAAGCTAAGAAAACGCAAAGAACTAATTCTCCCGAATCAAGATATA
GGGATGAACTGA Coding sequence (CDS) from alignment at sc0000476_pilon:76244..80155- >XLOC_023392 ID=XLOC_023392|Name=XLOC_023392|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1950bp|location=Sequence derived from alignment at sc0000476_pilon:76244..80155- (Clytia hemisphaerica_ch_hm2_pilon)
ATTAAATTCGTTGATGAGAAGGAGATAATGAGCGGCAATGAAAAGTCTGC
GAAAAGAAGTAGGACATCCGTAGAGAAAGAAGATTATTCTATCGTAAAAG
TTTTGGATTCTAAAGAAATTGATGGTACTGTTTTTTGCGAGATTAAATTC
GTTGATGAGAAGGAGATAATGAGCGGCAATGAAAAGTCTGCGAAAAGAAG
TAGGACATCCGTAGAGAAAGAAGATTATTCTATCGTAAAAGTTTTGGATT
CTAAAGAAATTGATGGTACTGTTTTTTGCGAGGTGTTATGGAACAATAGC
TCTACTTCTTGGATTCGGGAAAGCTACTTACCGGTGATTATCAAAGAATT
AGAACACGCGAAAATAGAAACTGTGGAAGAAAACTTTCTTGGTCAAAAGA
AGAAAATACAGATAATTTCCTTATCTCAACAAAGGTGTTATGGAACAATA
GCTCTACTTCTTGGATTCGGGAAAGCTACTTACCGGTGATTATCAAAGAA
TTAGAACACGCGAAAATAGAAACTGTGGAAGAAAACTTTCTTGGTCAAAA
GAAGAAAATACAGATAATTTCCTTATCTCAACAAAGGCAAGAAAGTTCTA
CCACGACTCCGAGAGAAATAGATGAAGCGGACTGTTCAGCTTGTGGAGAA
ACGGCTGTAATTGGTGAAGAGAATGATGATGACGATGATGACGATGATGA
TATTGAGAGTACATGTAACACAGATAAATCGAAACAAAAAGCAAAAAATA
CTAAAACCGCGGGCAAGAAAGTTCTACCACGACTCCGAGAGAAATAGATG
AAGCGGACTGTTCAGCTTGTGGAGAAACGGCTGTAATTGGTGAAGAGAAT
GATGATGACGATGATGACGATGATGATATTGAGAGTACATGTAACACAGA
TAAATCGAAACAAAAAGCAAAAAATACTAAAACCGCGGGAATACTGGCTA
TAACAAGTCCATGTGGAATAGTTTTGGATTTAAAAGAGCTTTATAACTGT
GAGAGTAAACGGCAAGTGTATGGCTGTCTATCTGACTTTCTTTCGGAGCA
TAGCATGATAGGAATACTGGCTATAACAAGTCCATGTGGAATAGTTTTGG
ATTTAAAAGAGCTTTATAACTGTGAGAGTAAACGGCAAGTGTATGGCTGT
CTATCTGACTTTCTTTCGGAGCATAGCATGATAGAAACGATTGTTTACGA
TGATGCATGTCATTTGAAGCCTTTCGCCACCAACAAAATTAGGAAAGATC
TTACACCATTGAGTAAAAGAATTGCTGGAATGGATTTTGCAGTTGATCGT
TTTCATTTCAAAAACCACATTGGAGAATGGTGTCTTGAAAACTGCGACCC
TGATATGGTTGCAAATTTAAACGAGAAACGATTGTTTACGATGATGCATG
TCATTTGAAGCCTTTCGCCACCAACAAAATTAGGAAAGATCTTACACCAT
TGAGTAAAAGAATTGCTGGAATGGATTTTGCAGTTGATCGTTTTCATTTC
AAAAACCACATTGGAGAATGGTGTCTTGAAAACTGCGACCCTGATATGGT
TGCAAATTTAAACGAGGTCAACACCGAGAGCTGCGAACAGTTATTCAGCT
GGTTTTCATCGTTTAAGCACATGACCAAACACATGAAGCGCGAGACCTTC
ATATTTCTTACGTTGTATTTGATGGAAAGTCAAAATCAGTTGACAGAAGA
AAAGCTAAGAAAACGCAAAGAACTAATTCTCCCGAATCAAGATATAGGGA
TGAACTGAGTCAACACCGAGAGCTGCGAACAGTTATTCAGCTGGTTTTCA
TCGTTTAAGCACATGACCAAACACATGAAGCGCGAGACCTTCATATTTCT
TACGTTGTATTTGATGGAAAGTCAAAATCAGTTGACAGAAGAAAAGCTAA
GAAAACGCAAAGAACTAATTCTCCCGAATCAAGATATAGGGATGAACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000476_pilon | genome | sc0000476_pilon:76244..80155 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 784-975:193 |
| Aaloc | 595-783:974 |
| Aaloc | 472-591:1390 |
| Aaloc | 295-468:2579 |
| Aaloc | 142-291:2916 |
| Aaloc | 1-141:3913 |
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