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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000441_pilon:16050..18576- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_023337 ID=XLOC_023337|Name=XLOC_023337|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2527bp|location=Sequence derived from alignment at sc0000441_pilon:16050..18576- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCAAGTGACTTACTCCAATTAACCGATAGTGATTACGAACCATCAGA
GCTTGAAAGAACTTCTGGCTTGACAGAATTGCCAAATAGCAGATTGTTGA
AAGAGGAGGAAATGGTGGTAGGGAAAGTTTGTTATGCTTTATGGGATGGC
AACAAAAAGTTTTACAAAGTGGAGATTTTGGAAATCAAAAAAACAAAAAT
CAAGAAACGAAAGGCACTGAAAGGTATTGAAAAGCACTTTATTTGCCAAA
ATAATTATTATGGAGAGCTTCGAAAATGTTGTGCTCTTTGATATCTTTCC
ATCCAATGTTATATAGTTTATCATTTAGGCCTGCCTTAAATAACCTTTTT
GTCACCATATCGCAGGTTAATGATACAGCCACGAGGAAGACATATTGCTA
GATTGTTTGATTTTCCTTTAGATTCGATTTGGTCTTTTATTTTAGTTTTT
TCAATATTTGTCTAAAATGTATTGATATTTCAGCTTGACATGAATTGTAA
AAAAGTCTGGTATAATGTACAGGCTGGAATTTTCTGACCTAGTCCCGAAC
TGATAGAGAGTAATTCTCATTTACCATTATTTTGACAGATTTAATGGTTT
TACATATTACTTGTACTATTTTTCTTTTTCATACCTTAGAAATTTCCAGT
CTATCCAATATCGAAAAATTGAATAATGCTAAAAAGAGACGAGAAGAGAA
AAGCCACATAACATCAAGCATTTCAAAACAAAAATATAGTACGCTCCAAC
AATATTTGATGTCAACAGAGCAATCAACATCGTCGACCGTGGATTATCAA
GGGTCCCCTTTATCCCCTGGAATAACTTTGCCAAGTTATCAACCTAATAT
ACACATATCAACAACACAAACTTTGGAAACCCTACCTTCACCAACCTATC
AGCCACAAGAGTTAAACATTGAACCTCCTCCCACATCTCAGGGTTTTTCA
TATCTTGAAGCAGTTCAGAATGACAATTTGGAGTTGCCACAGATTACTGA
CCATTGTCCGAATTGCATTCATCACGAAAGTTCATACCGTGCATTGTCGG
ACAAGTACAACCAGCTAAAAGCTGACTTCGACAAACAGCTGGCTACTGTT
AAATCACGTAAGATTAATTCCTAATGCTAAGTTTTCTAGGCGATCAATAT
AGTCTACATGGTGTGTTTCTCCCTTTTTTACTGGGGGCCAAAAGTTTTGA
AATGAGTGTGGCTGTTATTTTTTAATAATCTTTTTTTGGGGGAGACTGAG
TAAAGGGGGGGGGGTGAGACCCCTGAGGACACTGTGATCCTTATTATACT
AAAAGTATGTAGTCCTTTCAGTCATATTGTACTCAGCATGGTCTGTGCAA
TGTTTTCAAAGACCCCTTAAATAGCCGCATATTACCTTAAAGGCGCATAA
TGTTGAAAAATTTAGAAACTTTTAATTCTCAAAGGTGGGGTAGGATTCTT
TCGTATAAAAGGCGTTTTCCTTGATCATTTTTCTACTTAGTAGTTTGACA
CTTTCCTAAAATGAACAAATCTTTCAAATACATTTATTAAATACCTTTCT
TTTAACTCAACTCTACAGTTTAAGAGCAATTGGAAGAGCATGTATCTAAT
GCCAATAGCCTAACCGGTCTACCACAGGTGAGTGGTTATATTCTATTAGA
ATTAACGAAATACTTCTATTTCTTGATGAATGTAATTTTTGCCTCTGTTT
AAAATTCTTTAACTTTAACATGTCCAGGAATAAGAATAAAGAAATTTTAA
TCTTTCACATTGTAAATTTAGTTAAATTTAATCAACAACTAATTAAGTTT
TTCAAGGATAAGTTAGTGAAAAACAGGGAAAATTGAACGATTTTATCTAC
TTAAGTTTAAAACATTTTTCTTATAAATCCGTTGAATTAATGACCAACAC
TGGTGTCAAGGTGATGACCACGACAATGGCACAAGCGAAAGTTTGCAAAA
GTGCTGGGCAAGCCGTAACTTACCTCATGAAGAGAATGTACACACTACAA
CGCCTAGCCAACTCAACCCTTTCAGAAACTAGCGAACTCGGATATGAGCA
GTTACCTGAAGATGAGACATTGGCAATTCAAGGTAACTATATTTTGTTCA
TTAATTATTTTCTTCGTCCTAAAAAATAAAGTGAGGGGAAAACGAGATAA
GATGTTTTACGTCAAAATAATTGTTTTAGATTTTTGAAATATTAGAAATT
TTGAGAAATCGCAGAAAATACTGTAAACTGCTATAAACAGCTCTCTTTTC
AAGTTCCTGTGGACCTAGTTGCAGTATTAATGTGATTTTTTGGAAATGTT
TTTACAAACAATTTTCTATTTACTGTATTAAGATTATTACCTTGTAATGT
AAAATGTAAATTTAAATTTTTTTTTTAGGTTTTGCGATCTGTACTTTACG
GAACGCAGACGGAAATTTATTGACCAACGCTTACCTCAACCATTTAATGC
ATTCCGTGTGCGGCCAAGCAAGATTCTATTTATTGAACAATAAAAAGTGG
AAGGTCAAGCTCGAAGAAGGACGTATG Coding sequence (CDS) from alignment at sc0000441_pilon:16050..18576- >XLOC_023337 ID=XLOC_023337|Name=XLOC_023337|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2154bp|location=Sequence derived from alignment at sc0000441_pilon:16050..18576- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCAAGTGACTTACTCCAATTAACCGATAGTGATTACGAACCATCAGA
GCTTGAAAGAACTTCTGGCTTGACAGAATTGCCAAATAGCAGATTGTTGA
AAGAGGAGGAAATGGTGGTAGGGAAAGTTTGTTATGCTTTATGGGATGGC
AACAAAAAGTTTTACAAAGTGGAGATTTTGGAAATCAAAAAAACAAAAAT
CAAGAAACGAAAGGCACTGAAAGATGCCAAGTGACTTACTCCAATTAACC
GATAGTGATTACGAACCATCAGAGCTTGAAAGAACTTCTGGCTTGACAGA
ATTGCCAAATAGCAGATTGTTGAAAGAGGAGGAAATGGTGGTAGGGAAAG
TTTGTTATGCTTTATGGGATGGCAACAAAAAGTTTTACAAAGTGGAGATT
TTGGAAATCAAAAAAACAAAAATCAAGAAACGAAAGGCACTGAAAGAAAT
TTCCAGTCTATCCAATATCGAAAAATTGAATAATGCTAAAAAGAGACGAG
AAGAGAAAAGCCACATAACATCAAGCATTTCAAAACAAAAATATAGTACG
CTCCAACAATATTTGATGTCAACAGAGCAATCAACATCGTCGACCGAAAT
TTCCAGTCTATCCAATATCGAAAAATTGAATAATGCTAAAAAGAGACGAG
AAGAGAAAAGCCACATAACATCAAGCATTTCAAAACAAAAATATAGTACG
CTCCAACAATATTTGATGTCAACAGAGCAATCAACATCGTCGACCGGAAT
AACTTTGCCAAGTTATCAACCTAATATACACATATCAACAACACAAACTT
TGGAAACCCTACCTTCACCAACCTATCAGCCACAAGAGTTAAACATTGAA
CCTCCTCCCACATCTCAGGGTTTTTCATATCTTGAAGCAGTTCAGAATGA
CAATTTGGAGTTGCCACAGATTACTGACCATTGTCCGAATTGCATTCATC
ACGAAAGTTCATACCGTGCATTGTCGGACAAGTACAACCAGCTAAAAGCT
GACTTCGACAAACAGCTGGCTACTGTTAAATCACGAATAACTTTGCCAAG
TTATCAACCTAATATACACATATCAACAACACAAACTTTGGAAACCCTAC
CTTCACCAACCTATCAGCCACAAGAGTTAAACATTGAACCTCCTCCCACA
TCTCAGGGTTTTTCATATCTTGAAGCAGTTCAGAATGACAATTTGGAGTT
GCCACAGATTACTGACCATTGTCCGAATTGCATTCATCACGAAAGTTCAT
ACCGTGCATTGTCGGACAAGTACAACCAGCTAAAAGCTGACTTCGACAAA
CAGCTGGCTACTGTTAAATCACTTTAAGAGCAATTGGAAGAGCATGTATC
TAATGCCAATAGCCTAACCGGTCTACCACAGTTTAAGAGCAATTGGAAGA
GCATGTATCTAATGCCAATAGCCTAACCGGTCTACCACAGAAATCCGTTG
AATTAATGACCAACACTGGTGTCAAGGTGATGACCACGACAATGGCACAA
GCGAAAGTTTGCAAAAGTGCTGGGCAAGCCGTAACTTACCTCATGAAGAG
AATGTACACACTACAACGCCTAGCCAACTCAACCCTTTCAGAAACTAGCG
AACTCGGATATGAGCAGTTACCTGAAGATGAGACATTGGCAATTCAAGAA
ATCCGTTGAATTAATGACCAACACTGGTGTCAAGGTGATGACCACGACAA
TGGCACAAGCGAAAGTTTGCAAAAGTGCTGGGCAAGCCGTAACTTACCTC
ATGAAGAGAATGTACACACTACAACGCCTAGCCAACTCAACCCTTTCAGA
AACTAGCGAACTCGGATATGAGCAGTTACCTGAAGATGAGACATTGGCAA
TTCAAGGTTTTGCGATCTGTACTTTACGGAACGCAGACGGAAATTTATTG
ACCAACGCTTACCTCAACCATTTAATGCATTCCGTGTGCGGCCAAGCAAG
ATTCTATTTATTGAACAATAAAAAGTGGAAGGTCAAGCTCGAAGAAGGAC
GTATGGTTTTGCGATCTGTACTTTACGGAACGCAGACGGAAATTTATTGA
CCAACGCTTACCTCAACCATTTAATGCATTCCGTGTGCGGCCAAGCAAGA
TTCTATTTATTGAACAATAAAAAGTGGAAGGTCAAGCTCGAAGAAGGACG
TATG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000441_pilon | genome | sc0000441_pilon:16050..18576 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 934-1080:148 |
| Aaloc | 724-930:654 |
| Aaloc | 715-723:910 |
| Aaloc | 664-711:958 |
| Aaloc | 376-660:1707 |
| Aaloc | 226-372:1887 |
| Aaloc | 1-222:2528 |
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