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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:3203760..3206995+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_023278 ID=XLOC_023278|Name=XLOC_023278|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3236bp|location=Sequence derived from alignment at sc0000001_pilon:3203760..3206995+ (Clytia hemisphaerica_ch_hm2_pilon)
TACTGTCAAGCTAAGCATCATGGACAACATGTTATCCTACCGTGTGATCG
TTGTGAGATATGGCTTTGTGAACCTACCCTTATTCAACATATCAAGAAAT
CACATCGTATGACGATGATAGGAGCTGATATTAAAGACTTGATACAGAAA
TATTGGGCAGGTCACAGAATCACAGCCAAAAAACTTGACCAGTATGGAAA
TGTTGTGGTTAGACCATCGAAGTTAAAAAGAAAAGCTACGGATCTgctaa
accaatcaaaattgaaacataaaactacgacaacgacaacaaaaacaaaa
gagcaaattaaatCTGGTGTTGCTACACCTGGGAAAAAGTCAAACGAGGT
TAGAAAGACATTTGAGAAAGCACAGAAAACTGCAACTGAAACTCTAGCTG
TATCACCAGAAAAATCGCCAGAAGAGATTGCAAAAATGGCAAAGGAGATT
GAGGATATGTCAAATATCAATAAAACACTGTTGAACATCGGTCAGAAGAC
TGACTCTATAAACGAAAGCAGGGAAACGACTGATTCAGCAGTTGATATTG
ACATTATTAGCAAGAATCGTTTAAAACCTGCAACTGTTAAAATTGAAGTT
ATTGAGATTATGAGTAGCGATGAGGAGGGTGAGAAGGAGGATAAGGAAAC
TATCAATTCTCGCAAACGAACAAATTTAGATATTGCTTCTCTTCCTCAAg
atgaagaaattcaaacaaagaaatcaaaaactgaaaaagtaatCGATTCC
GTAAATGTGACAAATTCATCCGAAAGTTCTAAACGTTTTACTGATTTACA
AAAGTCTGCATCTAATGAGCAAGATGTAAAACAAATTAACCATGAGCCTA
CGAAATCGAACCAGATAAAAGTTACCGAACCTTTAAAGGACGTTTCAAAA
TCAGCTGACGAACAATCTATAAATGCTTCCACTAcctctacaaaaatacc
cgtaCAGCCTTCACAAGcatcaaatgtcaaaaacttaACAACTATAAAAC
TAACATCAGGCAAAGTCGTACAGCTTGCAAAACGAACTGGAACGGTATTG
AAAAAACCTCTAGAACAACCAACGAACAAAGATTCACATCCTACCAAACC
ACTAGCTACCAAAGACAAGAAACCTCCAAATCCACGTAATGCAAGAGTTA
AACTATCCACATTAGAATTGAAGTCGAAGGATTCACACACACTAACAGGG
CTTTGTTCACTCGATTCCATTCCAACTGAACATAGGACAATCCAAAGGAC
GACTGGAGCAAAATTTCTCTATCAATGTCCTCATTGCGAAGGTCAATATT
TCTCTTTAGCGACTTATTTGATACACCATTTAGCATTTTATCACTATTAC
GATACTAAGATAGCGACATTTGAAACACTCAAACAGCAACAAGTTGATCG
TTGTAATGTAGACCATGGTGGGATACACACACCTTTGCCATGTGAAATTT
GCaatgtttggttttgtaatgTTCGATTTGTTAATCATTATCTAAATgaa
cataaaatgaaatattgtcaGATATATGCTTTGATGAATGAGTATTTAGA
GTATTATTGGGATGGTATTGCTGTTGTTGCTAAAGAAATTAAGTTCGGTT
CGAAAGAGGTGAAAGATATACAATGGAATAAGATTGATTATGCAGCTATT
GATGAGAGATTACAAACGCCAGATTCACCAGAACCGTTAGATACCGACTC
TCTAATAActgaagaagcaaaaaagtcTGAACCTCCGAATCAGAAAATAT
CCACTCCATGTGAAATCTCGGAAATATCTCAGATAAACGTTCAACAGAAG
ACCCCCAATCAAATCGAGGCAAAGACCGTCAAGCCATCACAATGTAACGT
TGATATTTTCCAATCCCCTAattcatcagaaaaaaatccACAATATTCAC
CTACTCAGAGCAAATGTAAACACTTTGTGGAGAATCCAGATTCAGTAGCT
TTAGAACTTTCAAAAGAGAAATCTTTCCAGCCTGCAAGCGAACCAAAAGC
CATGGATCCTCACCAACCCGTCCAAGAGAAAATCACACTACCAAATAAAT
ATACGGAGTCGTCTACGCCAAATCCAGTTGATACCAAACTGGTTAAAACC
ACGCAGCCGTCCCAAATTGAAGAACCTCCATCCAAAGCAATAGACGCATC
ACCAACACCAACATACACGGCAGCTATTCTAACTGCAAATGTAATACCAC
CGCAGACGAAAACTACTCTTAATGCAGTACCACCACAAACGGAAGTAACT
CTAGTTACGAAATCATCCCAGACCAAGACAACTCCAGCTGcaaaaccaac
caaaaccaatgcaactacatctgaaaaaccaactaaaaccaatgcaacTA
CATCTGAAAAACCAACCAAAGCCAATGCATATCCAGAAAGAAAACCAACA
AAGACGAAAGCAGCTTCTGCTACAAAGTTATCTCAGTCCAATGCAACTCA
AGCTGAAAAGCCAATGCAGAATACTTCAACTGCTAaaccaaatcaaacaa
aggcAAGCCAGACTAAAACTATTCCGTCTGCAAAACCAGTCCAGATGAAA
GCTACTCCAATAACAAAACCAACCATAACGAAGGCCACTACTGCTATAAA
ACCAACCAAGACGGAAATCTCTCCTTCAGCAACACCAACCAACATGAAGG
CTACTCTAACAACGAAATCAACCCAGACGAATGCTCCTTCAACTGTAAAA
CCATCAACAACGAAGACAACTCCAACTGCTAAGCCAACCGAGACGAAAAT
CTCTCCAGCTGTAAAACCATCCGTAATAGAGGCAACTCCAGCTGCAAAAA
CAACCGAAACTAAAACCTCTCCAGCTGCAAAGACATCCGTAACGAAGGCA
ACTCCAGCTGTAAAACCATCCGTAACAAAGGCAACTCCAGCTGCAAAGCC
ATCCGTAACGAAGGCACCTCCAGCTTCTAAACCAACCGAATCAAAGGCAA
CTCCAGCTGTAAAACCATCCGTAACAAAGGCAACTCCAGCTGCAAAGACA
TCCGGAACGAAGGCACCTCCAGCTGCAAAACCATCCGTAACGAAGGCACC
TCCAACAGCGAAAACAACCGAGACTAAAACCTCTCCAGCTGCAAAACCAT
CTGTAACGAAGGCACCTCCAACAGCGAGAACAACCGAGACTAAAACCTCT
CCAGCTGCAAAACCATCCGTAACGAAGGCAACTCCAGCTGCAAAAACATC
CGTAACGAAGGCACCTCCAACAGCGAAAACAACCGA Coding sequence (CDS) from alignment at sc0000001_pilon:3203760..3206995+ >XLOC_023278 ID=XLOC_023278|Name=XLOC_023278|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3606bp|location=Sequence derived from alignment at sc0000001_pilon:3203760..3206995+ (Clytia hemisphaerica_ch_hm2_pilon)
TACTGTCAAGCTAAGCATCATGGACAACATGTTATCCTACCGTGTGATCG
TTGTGAGATATGGCTTTGTGAACCTACCCTTATTCAACATATCAAGAAAT
CACATCGTATGACGATGATAGGAGCTGATATTAAAGACTTGATACAGAAA
TATTGGGCAGGTCACAGAATCACAGCCAAAAAACTTGACCAGTATGGAAA
TGTTGTGGTTAGACCATCGAAGTTAAAAAGAAAAGCTACGGATCTgctaa
accaatcaaaattgaaacataaaactacgacaacgacaacaaaaacaaaa
gagcaaattaaatCTGGTGTTGCTACACCTGGGAAAAAGTCAAACGAGGT
TAGAAAGACATTTGAGAAAGCACAGAAAACTGCAACTGAAACTCTAGCTG
TATCACCAGAAAAATCGCCAGAAGAGATTGCAAAAATGGCAAAGGAGATT
GAGGATATGTCAAATATCAATAAAACACTGTTGAACATCGGTCAGAAGAC
TGACTCTATAAACGAAAGCAGGGAAACGACTGATTCAGCAGTTGATATTG
ACATTATTAGCAAGAATCGTTTAAAACCTGCAACTGTTAAAATTGAAGTT
ATTGAGATTATGAGTAGCGATGAGGAGGGTGAGAAGGAGGATAAGGAAAC
TATCAATTCTCGCAAACGAACAAATTTAGATATTGCTTCTCTTCCTCAAg
atgaagaaattcaaacaaagaaatcaaaaactgaaaaagtaatCGATTCC
GTAAATGTGACAAATTCATCCGAAAGTTCTAAACGTTTTACTGATTTACA
AAAGTCTGCATCTAATGAGCAAGATGTAAAACAAATTAACCATGAGCCTA
CGAAATCGAACCAGATAAAAGTTACCGAACCTTTAAAGGACGTTTCAAAA
TCAGCTGACGAACAATCTATAAATGCTTCCACTAcctctacaaaaatacc
cgtaCAGCCTTCACAAGcatcaaatgtcaaaaacttaACAACTATAAAAC
TAACATCAGGCAAAGTCGTACAGCTTGCAAAACGAACTGGAACGGTATTG
AAAAAACCTCTAGAACAACCAACGAACAAAGATTCACATCCTACCAAACC
ACTAGCTACCAAAGACAAGAAACCTCCAAATCCACGTAATGCAAGAGTTA
AACTATCCACATTAGAATTGAAGTCGAAGGATTCACACACACTAACAGGG
CTTTGTTCACTCGATTCCATTCCAACTGAACATAGGACAATCCAAAGGAC
GACTGGAGCAAAATTTCTCTATCAATGTCCTCATTGCGAAGGTCAATATT
TCTCTTTAGCGACTTATTTGATACACCATTTAGCATTTTATCACTATTAC
GATACTAAGATAGCGACATTTGAAACACTCAAACAGCAACAAGTTGATCG
TTGTAATGTAGACCATGGTGGGATACACACACCTTTGCCATGTGAAATTT
GCaatgtttggttttgtaatgTTCGATTTGTTAATCATTATCTAAATgaa
cataaaatgaaatattgtcaGATATATGCTTTGATGAATGAGTATTTAGA
GTATTATTGGGATGGTATTGCTGTTGTTGCTAAAGAAATTAAGTTCGGTT
CGAAAGAGGTGAAAGATATACAATGGAATAAGATTGATTATGCAGCTATT
GATGAGAGATTACAAACGCCAGATTCACCAGAACCGTTAGATACCGACTC
TCTAATAActgaagaagcaaaaaagtcTGAACCTCCGAATCATACTGTCA
AGCTAAGCATCATGGACAACATGTTATCCTACCGTGTGATCGTTGTGAGA
TATGGCTTTGTGAACCTACCCTTATTCAACATATCAAGAAATCACATCGT
ATGACGATGATAGGAGCTGATATTAAAGACTTGATACAGAAATATTGGGC
AGGTCACAGAATCACAGCCAAAAAACTTGACCAGTATGGAAATGTTGTGG
TTAGACCATCGAAGTTAAAAAGAAAAGCTACGGATCTgctaaaccaatca
aaattgaaacataaaactacgacaacgacaacaaaaacaaaagagcaaat
taaatCTGGTGTTGCTACACCTGGGAAAAAGTCAAACGAGGTTAGAAAGA
CATTTGAGAAAGCACAGAAAACTGCAACTGAAACTCTAGCTGTATCACCA
GAAAAATCGCCAGAAGAGATTGCAAAAATGGCAAAGGAGATTGAGGATAT
GTCAAATATCAATAAAACACTGTTGAACATCGGTCAGAAGACTGACTCTA
TAAACGAAAGCAGGGAAACGACTGATTCAGCAGTTGATATTGACATTATT
AGCAAGAATCGTTTAAAACCTGCAACTGTTAAAATTGAAGTTATTGAGAT
TATGAGTAGCGATGAGGAGGGTGAGAAGGAGGATAAGGAAACTATCAATT
CTCGCAAACGAACAAATTTAGATATTGCTTCTCTTCCTCAAgatgaagaa
attcaaacaaagaaatcaaaaactgaaaaagtaatCGATTCCGTAAATGT
GACAAATTCATCCGAAAGTTCTAAACGTTTTACTGATTTACAAAAGTCTG
CATCTAATGAGCAAGATGTAAAACAAATTAACCATGAGCCTACGAAATCG
AACCAGATAAAAGTTACCGAACCTTTAAAGGACGTTTCAAAATCAGCTGA
CGAACAATCTATAAATGCTTCCACTAcctctacaaaaatacccgtaCAGC
CTTCACAAGcatcaaatgtcaaaaacttaACAACTATAAAACTAACATCA
GGCAAAGTCGTACAGCTTGCAAAACGAACTGGAACGGTATTGAAAAAACC
TCTAGAACAACCAACGAACAAAGATTCACATCCTACCAAACCACTAGCTA
CCAAAGACAAGAAACCTCCAAATCCACGTAATGCAAGAGTTAAACTATCC
ACATTAGAATTGAAGTCGAAGGATTCACACACACTAACAGGGCTTTGTTC
ACTCGATTCCATTCCAACTGAACATAGGACAATCCAAAGGACGACTGGAG
CAAAATTTCTCTATCAATGTCCTCATTGCGAAGGTCAATATTTCTCTTTA
GCGACTTATTTGATACACCATTTAGCATTTTATCACTATTACGATACTAA
GATAGCGACATTTGAAACACTCAAACAGCAACAAGTTGATCGTTGTAATG
TAGACCATGGTGGGATACACACACCTTTGCCATGTGAAATTTGCaatgtt
tggttttgtaatgTTCGATTTGTTAATCATTATCTAAATgaacataaaat
gaaatattgtcaGATATATGCTTTGATGAATGAGTATTTAGAGTATTATT
GGGATGGTATTGCTGTTGTTGCTAAAGAAATTAAGTTCGGTTCGAAAGAG
GTGAAAGATATACAATGGAATAAGATTGATTATGCAGCTATTGATGAGAG
ATTACAAACGCCAGATTCACCAGAACCGTTAGATACCGACTCTCTAATAA
ctgaagaagcaaaaaagtcTGAACCTCCGAATCAAGGCAACTCCAGCTGC
AAAAACATCCGTAACGAAGGCACCTCCAACAGCGAAAACAACCGAAGGCA
ACTCCAGCTGCAAAAACATCCGTAACGAAGGCACCTCCAACAGCGAAAAC
AACCGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:3203760..3206995 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1744-1803:3177 |
| Aaloc | 1-1740:1 |
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