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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000444_pilon:108419..112009+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_023187 ID=XLOC_023187|Name=XLOC_023187|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3591bp|location=Sequence derived from alignment at sc0000444_pilon:108419..112009+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCTCCTCCACTGaatgtattttgaaatgtaaaacTACTGATTCTTCAAC
GATAGCTTATTTTGTTGAAGAAGTATCGAAATGTTTTTGTCTTGTGAATG
AAACTCAACAAATGTTTTCCAATGATATCACGATCAATGGGACGCTGTAT
AAGCCAGAACCTGTAAGTAAGACGAAAATTATTATCACCTATCAGCCTTG
ACAATGCGAgaagactgggttcgagttttaAAGAAAGATTGGCGTCAAAA
TGTCTGAAGTCGTTGCACTAAGACCATGCTCAGATGTTACGGTTCCGGTT
CGCTCCGgtgtgattttcgttacggatcgagagtgttcatattgctttcg
aaacgtttcggagcaagaaaacggaatagttccgttccgatgaaaaaaag
TGGAGCAAAACTGTTTCCatatgttttgctttgtaacgtcttcttttttg
acattttgaactTTGATGCTTACAGTACGTATATGGCCCCCGAAACAgag
gattctgacctgtagatttatcagacgactaattcagatttttgtttatt
ttgaaagaatgatggtcatacttaaaaatgagcatgtttttgataaaaat
tgcatatacctcactctagctccttggatagtgaaaataagttatgaaaa
tggggtataggaaacctTCTAAACCTAATGCcattcagaaaatgcaaata
catctgtgactttagaggatgggtaaaagatatagcatcttaaaggtcaa
ccagtattttgggttCCTAGAATCAGCAtcgataaaaccgaaaattctaa
atatgagaaacagcaaaaaatcttggaattccattcctatcagcttggaa
taatagtttataacaaaaaaccaatatttcatataaaaatttttgtttct
gttCGGAGTTCAAGTTATTGGTAaaagctcctgaaataatagaacttttg
ccatgaatttttctgtaaattcctaacttttattaagcttcgaaataaaa
aaaaatttgactcctaaaaaatttcacaccttgagcatgatgacgtTTCT
GACAGTAgggtgtcataaaaattgacactttttcaatacaaatttatttt
ttgtatgttaaccctattagccccaagcttttttgacttttgtatcccca
gggggggggggggtagaatctaccaccctcgattattttcgatctagaag
agctatggccatgaaacttggtacagatgttctccatcatgatacaattt
tccaggaagaaaaaaaaaattgatgacgtcattcaaaaactgatgacgtc
atcataaaatttccacctgtcggaaaaaagcccaaatatatggtttacaa
aaatgtttattacagtcgaaccaataaagatatttcaattatgtttaaag
attctgaaaggtaaaagactgttcttttACATAATTGCTGGTTTTGCAAG
TTCCAtgaatattttttcttaaaatctatgctgaagatgagtaaaatttt
caaaatttgatgacgtcataaatgatgacatcatcattttcaaaaatttt
ctttaaattttttaaatttgtattatcaatgcctatcacgtgtcaaaatt
tgaaaatgattgaataaatagtttagaagttaccagcactttaaaatttt
gagttttaaggattttagctgggttttatgtcatgtttcacaataaagtc
ataaaacctgatctgtacaacctatgaccctaaaattttgtacaagtact
cttaataagattttattaaaagtcagaaagtttcaagtcgtttgaaaaat
ttttctccgagatataaacaaaagaactctagcgtggtagattctacccc
cctccctggggctaatagggttaaatatatcgtttaaaccgtaatttatt
ggatatttaggataaaataacccttttaaactcaggcaacttttttctaa
atcctttgttagaatacaatagctatttataagaacaaaggaaattttcg
gtttttgctcactttggcatgatgagtgacgtcatcaagaaAGTTTTTGT
CAAAAGCTACCATGTGTGACAAGGTTCTTATGTgacaaatttcatccaaa
aagaactactagatcaaaagttaaggggtggcaCAGGAAAAGCTCCCCTA
GGTTTGGAAGTAAaagcccctaaaagcctaggttgaatagggttaaagct
tattattttcagtttcagttaaatttaaaacccgatggatgtaaaattta
tgacttttataaaatatttcaagattttcgatgatgcaaagtccaaactg
aaaatttagaaattttcaaaaggacaattttgatttaacaacgttttaat
caaatttctgaaaaccaatctcttttgaaaatggttccattcatgtatgg
aatatgctgtgaaatttttagaaatacaGCTTAAGATATGAATGCAAAAT
GTTGACCATAGTtttaaatgtgatttagagggttttgggcataagtttgt
ttgataaaatttttacagtatacccctggttgtcaaaacggaggCTTAGG
GCCCCCAAAACAGAGGTGtacttaaaatcaaattatcaagcccagtggta
atagggggagaaactttgaaaatatttgtgttttcccttaaagatatctc
aagaaatcagtaaaattgcaaacctctgttttgggggccattacaAAAAG
ctcctatctttaagcgattgaaaaatattgttgaaattgaaaaatatctt
ttaccaattccgaaattccgcaaatttttttgctaaattccgtttttccg
cactaaaattgtctaattgtccgtctccgtcagagaacccaatttccgta
attccgtctaaattttcgccaaatccgccactccgtccgaaaaaaagggc
cgattccgctcctccacCAACCATGAACCCCCCTAAAGTAGagatattaa
agtttttcatgcagcaaaaaattttttaaaacgtctttttctcttgattt
gagagaaattttaaattcgatcgacgttttggggacCACATACTGTACAC
TTGTTtattcggaaccgtttcgtttcggagcgaaatgGAACCGTGAAGTC
TGAACGTCGATGGCCTGAACATGACCTAATTCTCAACATAATTATTTTTA
CTCTCATTGATTATTTGATAAAGAAAACTTAGCCTGTGAATCTCAGGgta
ttttttctaaaacttgataaaaaagcaaaatattgattttcgtacatatc
aaaataaaaggctTGAAGTTGCTTTTCTGACCaagtttttaccttttttt
gagaGCGAGTGAACTAAAAACAACGTCTGCGTTAGTTTTGTTGGTTAGAT
TAGTCATCAGACAAAATTTCCACTTTGTACTTGTAATGGAACGATATAAC
TGTTCTTTCTTTAGAAAATGACATCATGCGTGCAAGTCAAGGACAGATCT
CGTTTCTCAACAAACCCTGGCACAGGTTTCTACACACTTGACAAAGACAA
TGTACTAACTGACGTATTCTGTGATTTCTCAAACCAAGGGAAACCTTCTT
GTaaacatttgaaagaattttgtccaACTTGTTCATCAGGG Coding sequence (CDS) from alignment at sc0000444_pilon:108419..112009+ >XLOC_023187 ID=XLOC_023187|Name=XLOC_023187|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=678bp|location=Sequence derived from alignment at sc0000444_pilon:108419..112009+ (Clytia hemisphaerica_ch_hm2_pilon)
GTCTCCTCCACTGaatgtattttgaaatgtaaaacTACTGATTCTTCAAC
GATAGCTTATTTTGTTGAAGAAGTATCGAAATGTTTTTGTCTTGTGAATG
AAACTCAACAAATGTTTTCCAATGATATCACGATCAATGGGACGCTGTAT
AAGCCAGAACCTGTCTCCTCCACTGaatgtattttgaaatgtaaaacTAC
TGATTCTTCAACGATAGCTTATTTTGTTGAAGAAGTATCGAAATGTTTTT
GTCTTGTGAATGAAACTCAACAAATGTTTTCCAATGATATCACGATCAAT
GGGACGCTGTATAAGCCAGAACCTAAAATGACATCATGCGTGCAAGTCAA
GGACAGATCTCGTTTCTCAACAAACCCTGGCACAGGTTTCTACACACTTG
ACAAAGACAATGTACTAACTGACGTATTCTGTGATTTCTCAAACCAAGGG
AAACCTTCTTGTaaacatttgaaagaattttgtccaACTTGTTCATCAGG
GAAAATGACATCATGCGTGCAAGTCAAGGACAGATCTCGTTTCTCAACAA
ACCCTGGCACAGGTTTCTACACACTTGACAAAGACAATGTACTAACTGAC
GTATTCTGTGATTTCTCAAACCAAGGGAAACCTTCTTGTaaacatttgaa
agaattttgtccaACTTGTTCATCAGGG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000444_pilon | genome | sc0000444_pilon:108419..112009 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 163-339:3415 |
| Aaloc | 1-162:1 |
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