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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000308_pilon:33426..36158- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_023116 ID=XLOC_023116|Name=XLOC_023116|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2733bp|location=Sequence derived from alignment at sc0000308_pilon:33426..36158- (Clytia hemisphaerica_ch_hm2_pilon)
CAAGAAATTATCAACGCAGCAAAGGAAGAAAGTTGGAGAAACCTACTAGA
AGACACTGTCACAGAGGCTGATGACAACAGGATGTGGCGTCTGATCAAAT
CCCTCGACGGCACCCCAGAAACAAACTCCCCAAATGAAGCAATGAAGCAT
AACGGGAAAACCATAACCTCAAACGAAAGGAAAGCGGAGATATTCGCCAA
ACATTATGCCTCGGTCAGTCGCCATAAGTTCACAAAGGAAGAAAGAGATG
TCAACCGAGAATGCAAAAAGAGACTGAGAGCAACTAGAGACGATAGAGAT
TGGGTCCCATTCACCATTCCGGAACTGGAACGAGCAATAAAGAAGATGAA
ACGCAAAGGAGCCGCCGGCCCGGACGATATACCTCCATCTTTCCTGAAAG
AGCTAGGCCCCACCGCACTCCAGGAATTACTGGAGATATTCAACTCCAGC
TTCACGACATCCTTTTGTCCACAAATATGGCGCCTAACACACATCTTACC
ACTGCTTAAATCGGGCAAACCCGCAAGCGAACTAGCTTCTTTTCGACCAA
TATCGCTAACCTCTTGTGTTGTCAAAGCCTTGGAAAGGATGGTGAACGAC
AGGCTCTACCATCTGGCAGAAACCCAAGAATTGTTCCACCCAGCCCAGGC
AGGTTTTCGCAAAGGGAGAGGCTGCGACGACCAAATAGGCAGGCTAATCC
AGAAGATTCAAGACGGATTCCAAGACAAACCCTTCAAAAGATCAGTAATA
GTGTTATTAGATTTCAGTAAAGCCTATGACACTGTCTGGAAACAGAAGCT
ACTACTATCCCTACAAGAACAAGAAGTCCCCCCAATCTACGTGCACTGGC
TAAGCAACTTCCTAAGCAACAGAACCGCAAGAGTGCGAATGAACGGAAGA
CTAGGCAAAGCTGTATCTACGCGACAAGGCCTACCCCAAGGATCGGTGTT
ATCACCAATACTGTTCCTCTTCTACATCAACAATCTCGCAAAAATCCTAC
CACAAGAGGCAACCACTCACTCTTCGCGGATGTGTGGACATGCTAGTACA
GCAAACACCCTCAAAGAAGCAGAGGAAATATGCCAGAGATCAGTAGATGT
GGTTGTGAAATGGTCGAAGGAATGGAAAATCTCCTTGAACTCAGGGAAAA
GTGAATCGAGCTTCTTCTCAAATTCCACCAGAGAGACAGCAAAAAAGTGG
ACCCCATCCATCAAGATAGAGAATAGCACCATTAAATACAACGCAACACC
CCGTCTTCTTGGAGTGATTCTAGACAGATCCCTCAGCTTTGGTCCACATG
TCACGAGCATTGAAGAACGAGTCGCTCCAAAACTAAGAACCATTGCCTGC
CTCTCAAACACATCATGGGGATGGAAGAAAGACTACCTAAAACGGGTCTA
CACTGCAAACATAAAATCAATCATCAACTATGCAGGTTTCGCATGGCAAC
CATGCCTATCCGACACCCAATTGAAAAATCTCGAGAGAATCCAATACCGA
GCACTAAGGAATATAACAGGACAGACCCTCAACACCCCTTGTGAAGCCCT
CCTCTTAGAAGCGGGGGAACAAAGCCTGAGAACACAATTCCAGAGGAATG
CAATCATTGCGTCAGAAAAGGCTCTCAGACTCTCACAAGACCACCCAAGA
CGTATCGCATACGAACAAACAAACGTAACTAGACGAATACAAAGAAAGAG
TTGGAGAACATCCGCTAGAGACCTCGAAGCAAGACTCCCGGACACAGACG
ACATTAGTAACCGTAAAACCCTCGATTACTTTACCCACCCACCTTGGATC
CCGGATCCAAACATCAAGATCTTCAGCACCCTACCTGGAATCGAAAACAA
ACTCGTGGATGGACAACTGATCCTCGAAGCAGCCTTAACACAGATTCGCT
CCTTCAACCCAACCCGGACTATCTACACAGATGGGTCCGCCACATCAGGA
ACGACTGACGGCGGAGCAGGAGTAGTTCTGACCACCGATGACCCTGAAGA
TATAACACGAACGCATATACTGAGGATCAAAGGTGCGAAATTCACAAGCT
CCTACGAAGAAGAAGTCAGCGCCATGGAGAGAGCTGCAGAATGGATCGCT
GAGAATGCCAAAGAAGAGGACGTCATTGTGATTGGCACTGATAGCCAGTC
CCTGTGTCAAGCACTAGCCCAACGCAACCGGGAAGTGGACCACATCCGCC
ATAAACTTAGCTAATCGAAGGCTGAGACGATCATCCAATGGTTACCGGGC
CACTGCAACATCCCCGGCAACGAGGCAGCTGACAAAGCAGCAAAAGAAGC
AACCAAAATCGAAGGTGCGCATCGTCCTACCAGTATGAATTGCGCACGCA
CAGTTGTCAAAACAACAATCAAAGACGGTGACCCTGAACGCCCACGGCTG
AAAGAAGTATATTCTAAATACTCCAACACAAAGGAAAAATCGGTGAAGAC
AAGACGTGACCAGGTTGACCTGGCCAGAATTAGGTGTGGCAAGCACCTAG
CATTCGCCGCATACGACCATCAAATTCATGAAGAAGTAGACCCTAAATGC
CCTCGATGCGACCATGCTCAACACGACCTGGAGCACTGGTTCCTGGAATG
TCCAGCAACACGAGTCGCACGTCTGGAAATTTTTGGTGAGGAAGCTGAAG
AAGGACTCAGCTTGCTGACGAAACGACCAGAGCAGTCAATCACCCTGGCG
AGCAGAACACTCCTCGGGGTGCGTGACGAATGA Coding sequence (CDS) from alignment at sc0000308_pilon:33426..36158- >XLOC_023116 ID=XLOC_023116|Name=XLOC_023116|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5466bp|location=Sequence derived from alignment at sc0000308_pilon:33426..36158- (Clytia hemisphaerica_ch_hm2_pilon)
CAAGAAATTATCAACGCAGCAAAGGAAGAAAGTTGGAGAAACCTACTAGA
AGACACTGTCACAGAGGCTGATGACAACAGGATGTGGCGTCTGATCAAAT
CCCTCGACGGCACCCCAGAAACAAACTCCCCAAATGAAGCAATGAAGCAT
AACGGGAAAACCATAACCTCAAACGAAAGGAAAGCGGAGATATTCGCCAA
ACATTATGCCTCGGTCAGTCGCCATAAGTTCACAAAGGAAGAAAGAGATG
TCAACCGAGAATGCAAAAAGAGACTGAGAGCAACTAGAGACGATAGAGAT
TGGGTCCCATTCACCATTCCGGAACTGGAACGAGCAATAAAGAAGATGAA
ACGCAAAGGAGCCGCCGGCCCGGACGATATACCTCCATCTTTCCTGAAAG
AGCTAGGCCCCACCGCACTCCAGGAATTACTGGAGATATTCAACTCCAGC
TTCACGACATCCTTTTGTCCACAAATATGGCGCCTAACACACATCTTACC
ACTGCTTAAATCGGGCAAACCCGCAAGCGAACTAGCTTCTTTTCGACCAA
TATCGCTAACCTCTTGTGTTGTCAAAGCCTTGGAAAGGATGGTGAACGAC
AGGCTCTACCATCTGGCAGAAACCCAAGAATTGTTCCACCCAGCCCAGGC
AGGTTTTCGCAAAGGGAGAGGCTGCGACGACCAAATAGGCAGGCTAATCC
AGAAGATTCAAGACGGATTCCAAGACAAACCCTTCAAAAGATCAGTAATA
GTGTTATTAGATTTCAGTAAAGCCTATGACACTGTCTGGAAACAGAAGCT
ACTACTATCCCTACAAGAACAAGAAGTCCCCCCAATCTACGTGCACTGGC
TAAGCAACTTCCTAAGCAACAGAACCGCAAGAGTGCGAATGAACGGAAGA
CTAGGCAAAGCTGTATCTACGCGACAAGGCCTACCCCAAGGATCGGTGTT
ATCACCAATACTGTTCCTCTTCTACATCAACAATCTCGCAAAAATCCTAC
CACAAGAGGCAACCACTCACTCTTCGCGGATGTGTGGACATGCTAGTACA
GCAAACACCCTCAAAGAAGCAGAGGAAATATGCCAGAGATCAGTAGATGT
GGTTGTGAAATGGTCGAAGGAATGGAAAATCTCCTTGAACTCAGGGAAAA
GTGAATCGAGCTTCTTCTCAAATTCCACCAGAGAGACAGCAAAAAAGTGG
ACCCCATCCATCAAGATAGAGAATAGCACCATTAAATACAACGCAACACC
CCGTCTTCTTGGAGTGATTCTAGACAGATCCCTCAGCTTTGGTCCACATG
TCACGAGCATTGAAGAACGAGTCGCTCCAAAACTAAGAACCATTGCCTGC
CTCTCAAACACATCATGGGGATGGAAGAAAGACTACCTAAAACGGGTCTA
CACTGCAAACATAAAATCAATCATCAACTATGCAGGTTTCGCATGGCAAC
CATGCCTATCCGACACCCAATTGAAAAATCTCGAGAGAATCCAATACCGA
GCACTAAGGAATATAACAGGACAGACCCTCAACACCCCTTGTGAAGCCCT
CCTCTTAGAAGCGGGGGAACAAAGCCTGAGAACACAATTCCAGAGGAATG
CAATCATTGCGTCAGAAAAGGCTCTCAGACTCTCACAAGACCACCCAAGA
CGTATCGCATACGAACAAACAAACGTAACTAGACGAATACAAAGAAAGAG
TTGGAGAACATCCGCTAGAGACCTCGAAGCAAGACTCCCGGACACAGACG
ACATTAGTAACCGTAAAACCCTCGATTACTTTACCCACCCACCTTGGATC
CCGGATCCAAACATCAAGATCTTCAGCACCCTACCTGGAATCGAAAACAA
ACTCGTGGATGGACAACTGATCCTCGAAGCAGCCTTAACACAGATTCGCT
CCTTCAACCCAACCCGGACTATCTACACAGATGGGTCCGCCACATCAGGA
ACGACTGACGGCGGAGCAGGAGTAGTTCTGACCACCGATGACCCTGAAGA
TATAACACGAACGCATATACTGAGGATCAAAGGTGCGAAATTCACAAGCT
CCTACGAAGAAGAAGTCAGCGCCATGGAGAGAGCTGCAGAATGGATCGCT
GAGAATGCCAAAGAAGAGGACGTCATTGTGATTGGCACTGATAGCCAGTC
CCTGTGTCAAGCACTAGCCCAACGCAACCGGGAAGTGGACCACATCCGCC
ATAAACTTAGCTAATCGAAGGCTGAGACGATCATCCAATGGTTACCGGGC
CACTGCAACATCCCCGGCAACGAGGCAGCTGACAAAGCAGCAAAAGAAGC
AACCAAAATCGAAGGTGCGCATCGTCCTACCAGTATGAATTGCGCACGCA
CAGTTGTCAAAACAACAATCAAAGACGGTGACCCTGAACGCCCACGGCTG
AAAGAAGTATATTCTAAATACTCCAACACAAAGGAAAAATCGGTGAAGAC
AAGACGTGACCAGGTTGACCTGGCCAGAATTAGGTGTGGCAAGCACCTAG
CATTCGCCGCATACGACCATCAAATTCATGAAGAAGTAGACCCTAAATGC
CCTCGATGCGACCATGCTCAACACGACCTGGAGCACTGGTTCCTGGAATG
TCCAGCAACACGAGTCGCACGTCTGGAAATTTTTGGTGAGGAAGCTGAAG
AAGGACTCAGCTTGCTGACGAAACGACCAGAGCAGTCAATCACCCTGGCG
AGCAGAACACTCCTCGGGGTGCGTGACGAATGACAAGAAATTATCAACGC
AGCAAAGGAAGAAAGTTGGAGAAACCTACTAGAAGACACTGTCACAGAGG
CTGATGACAACAGGATGTGGCGTCTGATCAAATCCCTCGACGGCACCCCA
GAAACAAACTCCCCAAATGAAGCAATGAAGCATAACGGGAAAACCATAAC
CTCAAACGAAAGGAAAGCGGAGATATTCGCCAAACATTATGCCTCGGTCA
GTCGCCATAAGTTCACAAAGGAAGAAAGAGATGTCAACCGAGAATGCAAA
AAGAGACTGAGAGCAACTAGAGACGATAGAGATTGGGTCCCATTCACCAT
TCCGGAACTGGAACGAGCAATAAAGAAGATGAAACGCAAAGGAGCCGCCG
GCCCGGACGATATACCTCCATCTTTCCTGAAAGAGCTAGGCCCCACCGCA
CTCCAGGAATTACTGGAGATATTCAACTCCAGCTTCACGACATCCTTTTG
TCCACAAATATGGCGCCTAACACACATCTTACCACTGCTTAAATCGGGCA
AACCCGCAAGCGAACTAGCTTCTTTTCGACCAATATCGCTAACCTCTTGT
GTTGTCAAAGCCTTGGAAAGGATGGTGAACGACAGGCTCTACCATCTGGC
AGAAACCCAAGAATTGTTCCACCCAGCCCAGGCAGGTTTTCGCAAAGGGA
GAGGCTGCGACGACCAAATAGGCAGGCTAATCCAGAAGATTCAAGACGGA
TTCCAAGACAAACCCTTCAAAAGATCAGTAATAGTGTTATTAGATTTCAG
TAAAGCCTATGACACTGTCTGGAAACAGAAGCTACTACTATCCCTACAAG
AACAAGAAGTCCCCCCAATCTACGTGCACTGGCTAAGCAACTTCCTAAGC
AACAGAACCGCAAGAGTGCGAATGAACGGAAGACTAGGCAAAGCTGTATC
TACGCGACAAGGCCTACCCCAAGGATCGGTGTTATCACCAATACTGTTCC
TCTTCTACATCAACAATCTCGCAAAAATCCTACCACAAGAGGCAACCACT
CACTCTTCGCGGATGTGTGGACATGCTAGTACAGCAAACACCCTCAAAGA
AGCAGAGGAAATATGCCAGAGATCAGTAGATGTGGTTGTGAAATGGTCGA
AGGAATGGAAAATCTCCTTGAACTCAGGGAAAAGTGAATCGAGCTTCTTC
TCAAATTCCACCAGAGAGACAGCAAAAAAGTGGACCCCATCCATCAAGAT
AGAGAATAGCACCATTAAATACAACGCAACACCCCGTCTTCTTGGAGTGA
TTCTAGACAGATCCCTCAGCTTTGGTCCACATGTCACGAGCATTGAAGAA
CGAGTCGCTCCAAAACTAAGAACCATTGCCTGCCTCTCAAACACATCATG
GGGATGGAAGAAAGACTACCTAAAACGGGTCTACACTGCAAACATAAAAT
CAATCATCAACTATGCAGGTTTCGCATGGCAACCATGCCTATCCGACACC
CAATTGAAAAATCTCGAGAGAATCCAATACCGAGCACTAAGGAATATAAC
AGGACAGACCCTCAACACCCCTTGTGAAGCCCTCCTCTTAGAAGCGGGGG
AACAAAGCCTGAGAACACAATTCCAGAGGAATGCAATCATTGCGTCAGAA
AAGGCTCTCAGACTCTCACAAGACCACCCAAGACGTATCGCATACGAACA
AACAAACGTAACTAGACGAATACAAAGAAAGAGTTGGAGAACATCCGCTA
GAGACCTCGAAGCAAGACTCCCGGACACAGACGACATTAGTAACCGTAAA
ACCCTCGATTACTTTACCCACCCACCTTGGATCCCGGATCCAAACATCAA
GATCTTCAGCACCCTACCTGGAATCGAAAACAAACTCGTGGATGGACAAC
TGATCCTCGAAGCAGCCTTAACACAGATTCGCTCCTTCAACCCAACCCGG
ACTATCTACACAGATGGGTCCGCCACATCAGGAACGACTGACGGCGGAGC
AGGAGTAGTTCTGACCACCGATGACCCTGAAGATATAACACGAACGCATA
TACTGAGGATCAAAGGTGCGAAATTCACAAGCTCCTACGAAGAAGAAGTC
AGCGCCATGGAGAGAGCTGCAGAATGGATCGCTGAGAATGCCAAAGAAGA
GGACGTCATTGTGATTGGCACTGATAGCCAGTCCCTGTGTCAAGCACTAG
CCCAACGCAACCGGGAAGTGGACCACATCCGCCATAAACTTAGCTAATCG
AAGGCTGAGACGATCATCCAATGGTTACCGGGCCACTGCAACATCCCCGG
CAACGAGGCAGCTGACAAAGCAGCAAAAGAAGCAACCAAAATCGAAGGTG
CGCATCGTCCTACCAGTATGAATTGCGCACGCACAGTTGTCAAAACAACA
ATCAAAGACGGTGACCCTGAACGCCCACGGCTGAAAGAAGTATATTCTAA
ATACTCCAACACAAAGGAAAAATCGGTGAAGACAAGACGTGACCAGGTTG
ACCTGGCCAGAATTAGGTGTGGCAAGCACCTAGCATTCGCCGCATACGAC
CATCAAATTCATGAAGAAGTAGACCCTAAATGCCCTCGATGCGACCATGC
TCAACACGACCTGGAGCACTGGTTCCTGGAATGTCCAGCAACACGAGTCG
CACGTCTGGAAATTTTTGGTGAGGAAGCTGAAGAAGGACTCAGCTTGCTG
ACGAAACGACCAGAGCAGTCAATCACCCTGGCGAGCAGAACACTCCTCGG
GGTGCGTGACGAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000308_pilon | genome | sc0000308_pilon:33426..36158 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1024-2736:1714 |
| Aaloc | 1-1020:2734 |
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