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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000043_pilon:1214533..1217893+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_023040 ID=XLOC_023040|Name=XLOC_023040|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3361bp|location=Sequence derived from alignment at sc0000043_pilon:1214533..1217893+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATATGCTTTGTTcaagtattttgaaaaaaatggtcaGCACCGGGA
GTGCGTTGCGCCAACACAATGGATAAAAGAAAGCAAACTTTACTGGCCAA
AATATGCTGCTCGTCAATTGGCTTTAGAAATGGCACCCTTAGACGAAACT
TGGCCCTCTTATCCCATACACGAGATAAAGAAATATCACGGTATTGATAC
AATTCCCTTTTCTCTGTTTTGAAAAAGATCTTTGGAACTCTCGTGTTCGG
TGCATTCTTCCGCCTCTTTTATAACCTCTTAAAATAATGTGATTTTTCTT
TCAACAgccatttttaaatttaaacgTTTGATTTATTTTCCAGACGACTA
CAATTATCTTAATGACTGCTGCTATACCACCACCGAAGATGAGAGtccag
tcaaaaaaaaaaccgaTGGTCAGTATATATTAAAACATAGTTCAAGTATC
AAGTTTCGTACATTTGCCCTTGTGCATTTGTATTGTTTCTGAAAAATCAT
GATGGTTAGTAATAATTAATGTCGATTTGCGTATTTCTTTTGGTTTAGAA
TCACCGAAAAGAGCTTCAAGCccaaatttcaatatttcaggCAGCTACGC
CAATTCGTTTAGCAGGCCGACCCTACCTGGCGCTTGTAGAACGCAATCTC
AGGTGCAGTCACCTACAGTTTCAATGAAAAGTAAGTTTAACCAGAATATT
TAGAATATGGACCCTTCTCCTGTttagtaattttcaaaaaaaattttagc
tGTTAAAAGGAAAGTCCTctctttattttgctttaaattgtcttttaaat
catttttaccATAGGAAAAAGAGACGATACTATCGTTCGCTCCAGTTTTT
CTCCGGCAGCCACATGCACCGAAAGTAATAGCTTTATACCACTGGCGTCA
ATAATAAACGCAGGtattttttattcgaaaattttaCTATAGGTACTATC
CAATCTTTTCGCATCTTTTACTCAGATTGCACTATTTCATTACTCCAGAC
AATTCTTGTTTTTTGACGGTATTTTCAGCTGATAATAACTTATTTTGGCT
TTCAGATAACAGTTTCAATCCAGACGACTGTATATCTCCATATGACCTTC
TCGGCAAATCTGGATCAGGTATGTTAGTCACCTTAGTTAGTCAGTGATTA
TTCCGAGTAAAAAATCGATCAAATAATATCACTAAACCGGATTAAACAAT
TTTCGAagaatgtttataaaaaaatatccatTTTAATGGCGATGGAGTAA
TACTTGAatttttctctgcttattattctttacattcttttatttatttt
tattcagcatacatttacatatttttcatAGCTTCTCACTCACAGTCACC
ACGACAATCGCCGAACTGTGCACGAAATAATGgcgctatgaaaaaaaaac
gtaaaaaaaatatatttttttttattagcaaTTTCAGTACCGAATATTTT
CAAAGCAGCCCTGTTCAGAAAGCTCGAGCTTATcctagtttgtttttttt
ttacttttagatgCAAACTTCATTGTTCCTGAAACCAATGATCAACGACC
TTGtaagtcttttttaaattaagcacagatgatttttttgtttttttctt
gtgaGTGAAGAATTCTTTTGCCTTGATCAATGCttcctgattttttttta
ctttctggGAAGGACTTGACAGATATTTTGTTGAGATAGAGAAACATACT
AtactatttttttaatttctttttgcaGCGACACAGAAAAAATGCCACTC
AAAATATGGAGATGGCGGAAAGGACTTCAAAGAAATGTCGAATAAACGTA
AGTTTTCAAGCTCAATATTACATTCTTGTTTTGTACAAAGAAataaagtc
cattcgctttgAGTATGCACACGTTTTTTCTACAACGTGGGAAACAATCT
CAAAGGAAGTAAGTCTAATTACGATGACACGGTTTCTACATGGTAGCTAA
AAcgagtgcacacttaaagcgaatgtaCTCTAGTTTGGTTGGATTTACAT
AAAAGCAAGAGTATAGAGTATAGTCATTCATGCGGGCTCCAGACATTCGG
TAAGAAAATGAGCAAGAGTGTAACCCACCCTTTGTTTCCATATCACATCA
GACTaattattacacttttttttcagaatatcaATATTCCGTCATGATGG
AGTTGCAAGTTTTGAAACGAAATCAAAACAGAATTCTCGCCATCCTGGAA
AACCAAGAAACAAGCCCTTCAGAACAGACACTTGAGCCACCAGAACCATT
GGATACGATGGAAGAATTCGATATCGAGGAAGAAAAACTCAAAACACACG
ATAAGAGAGTGATAAAGGTAAAAATAATCAATACTTTTTATATACCTTTT
CAATACCTCGATCTTCTTTTTACCCGACAACTTCACGTTTCACAGTAGGC
CCtcgtgaaatttttttatttcttgtgAAAATATATAGTAATTAAtgtat
tattttgaattttatcttGTAGCGAAAAATGATCAAGCAAATAGGTGGCA
AAGACATCCGTCAAGCAATCCGCTTAGCACTCGACAGCATGATGTCGAGA
AGACTACAAAGCAAGTTTTCAAAGTCGGGcttgcagaaaaaaagaaaatt
taaaggcACTTATCATTATAAATGCTTAGAGGGTAAGAcatattttatct
tattttatcCAAACTTTTATCCTTAAATAGTTAAGTATAATAATTCCGTC
ATAGTTAAATTCACTGTTGATGTAGACTTTGATCGTCAGAACTTCGGCTT
TACATTTTAGTATACTTTAAGAGAATAAATTAGTTAATGAGAATTGGCCC
TAATTTGCATTACATATTCACTTCCGCATATCCTAAAATTGGCCAATTCG
CATTAATCTATTCCCTTATATTAAATTAGCTGTGACAATTAGTTCTGCAA
GGCATGAATTTTTGAGGTGTCATTCGCATTATTGTATTCCGCATTAATCT
ATTAtggggggggttttcacttttacggtacgacggtattgggccttttt
ttccccggtaaatcggtattaccagaaaaaaacgacgggattacggtatt
tcattttctaccggtatcggtatttaGGTAATTCGGCTTCTTTTATCGAC
GGTactacggtatttgacccaaatttttgtcggtatgacggtatttgaga
cccctgaaaacccccccctATTATTGCATTAATGTATTCCCTTATTAAgg
tattttgttttatttcaacAGCTGTGCTGCTTCTAAAGTACGAACAATTC
GATATTGATAAAGAAGTTGGGGATATCATTAAACGAGCCAATGACAAACC
AAAGAATGCTGGTACTGACGATGGAAACCAATCGGATCACGAAAACAGCC
CTATTTCATAA Coding sequence (CDS) from alignment at sc0000043_pilon:1214533..1217893+ >XLOC_023040 ID=XLOC_023040|Name=XLOC_023040|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2460bp|location=Sequence derived from alignment at sc0000043_pilon:1214533..1217893+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATATGCTTTGTTcaagtattttgaaaaaaatggtcaGCACCGGGA
GTGCGTTGCGCCAACACAATGGATAAAAGAAAGCAAACTTTACTGGCCAA
AATATGCTGCTCGTCAATTGGCTTTAGAAATGGCACCCTTAGACGAAACT
TGGCCCTCTTATCCCATACACGAGATAAAGAAATATCACGATGTCATATG
CTTTGTTcaagtattttgaaaaaaatggtcaGCACCGGGAGTGCGTTGCG
CCAACACAATGGATAAAAGAAAGCAAACTTTACTGGCCAAAATATGCTGC
TCGTCAATTGGCTTTAGAAATGGCACCCTTAGACGAAACTTGGCCCTCTT
ATCCCATACACGAGATAAAGAAATATCACGACGACTACAATTATCTTAAT
GACTGCTGCTATACCACCACCGAAGATGAGAGtccagtcaaaaaaaaaac
cgaTGACGACTACAATTATCTTAATGACTGCTGCTATACCACCACCGAAG
ATGAGAGtccagtcaaaaaaaaaaccgaTGAATCACCGAAAAGAGCTTCA
AGCccaaatttcaatatttcaggCAGCTACGCCAATTCGTTTAGCAGGCC
GACCCTACCTGGCGCTTGTAGAACGCAATCTCAGGTGCAGTCACCTACAG
TTTCAATGAAAAAATCACCGAAAAGAGCTTCAAGCccaaatttcaatatt
tcaggCAGCTACGCCAATTCGTTTAGCAGGCCGACCCTACCTGGCGCTTG
TAGAACGCAATCTCAGGTGCAGTCACCTACAGTTTCAATGAAAAGAAAAA
GAGACGATACTATCGTTCGCTCCAGTTTTTCTCCGGCAGCCACATGCACC
GAAAGTAATAGCTTTATACCACTGGCGTCAATAATAAACGCAGGAAAAAG
AGACGATACTATCGTTCGCTCCAGTTTTTCTCCGGCAGCCACATGCACCG
AAAGTAATAGCTTTATACCACTGGCGTCAATAATAAACGCAGATAACAGT
TTCAATCCAGACGACTGTATATCTCCATATGACCTTCTCGGCAAATCTGG
ATCAGATAACAGTTTCAATCCAGACGACTGTATATCTCCATATGACCTTC
TCGGCAAATCTGGATCAGCTTCTCACTCACAGTCACCACGACAATCGCCG
AACTGTGCACGAAATAATGgcgctatgaaaaaaaaacCTTCTCACTCACA
GTCACCACGACAATCGCCGAACTGTGCACGAAATAATGgcgctatgaaaa
aaaaacatgCAAACTTCATTGTTCCTGAAACCAATGATCAACGACCTTat
gCAAACTTCATTGTTCCTGAAACCAATGATCAACGACCTTCGACACAGAA
AAAATGCCACTCAAAATATGGAGATGGCGGAAAGGACTTCAAAGAAATGT
CGAATAAACCGACACAGAAAAAATGCCACTCAAAATATGGAGATGGCGGA
AAGGACTTCAAAGAAATGTCGAATAAACaatatcaATATTCCGTCATGAT
GGAGTTGCAAGTTTTGAAACGAAATCAAAACAGAATTCTCGCCATCCTGG
AAAACCAAGAAACAAGCCCTTCAGAACAGACACTTGAGCCACCAGAACCA
TTGGATACGATGGAAGAATTCGATATCGAGGAAGAAAAACTCAAAACACA
CGATAAGAGAGTGATAAAGaatatcaATATTCCGTCATGATGGAGTTGCA
AGTTTTGAAACGAAATCAAAACAGAATTCTCGCCATCCTGGAAAACCAAG
AAACAAGCCCTTCAGAACAGACACTTGAGCCACCAGAACCATTGGATACG
ATGGAAGAATTCGATATCGAGGAAGAAAAACTCAAAACACACGATAAGAG
AGTGATAAAGCGAAAAATGATCAAGCAAATAGGTGGCAAAGACATCCGTC
AAGCAATCCGCTTAGCACTCGACAGCATGATGTCGAGAAGACTACAAAGC
AAGTTTTCAAAGTCGGGcttgcagaaaaaaagaaaatttaaaggcACTTA
TCATTATAAATGCTTAGAGGCGAAAAATGATCAAGCAAATAGGTGGCAAA
GACATCCGTCAAGCAATCCGCTTAGCACTCGACAGCATGATGTCGAGAAG
ACTACAAAGCAAGTTTTCAAAGTCGGGcttgcagaaaaaaagaaaattta
aaggcACTTATCATTATAAATGCTTAGAGGCTGTGCTGCTTCTAAAGTAC
GAACAATTCGATATTGATAAAGAAGTTGGGGATATCATTAAACGAGCCAA
TGACAAACCAAAGAATGCTGGTACTGACGATGGAAACCAATCGGATCACG
AAAACAGCCCTATTTCATAACTGTGCTGCTTCTAAAGTACGAACAATTCG
ATATTGATAAAGAAGTTGGGGATATCATTAAACGAGCCAATGACAAACCA
AAGAATGCTGGTACTGACGATGGAAACCAATCGGATCACGAAAACAGCCC
TATTTCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000043_pilon | genome | sc0000043_pilon:1214533..1217893 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1093-1230:3224 |
| Aaloc | 931-1089:2473 |
| Aaloc | 742-930:2129 |
| Aaloc | 673-738:1731 |
| Aaloc | 631-669:1513 |
| Aaloc | 562-627:1334 |
| Aaloc | 499-558:1058 |
| Aaloc | 400-495:817 |
| Aaloc | 268-396:551 |
| Aaloc | 193-264:346 |
| Aaloc | 1-189:1 |
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