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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000275_pilon:242802..247167- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_022885 ID=XLOC_022885|Name=XLOC_022885|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4366bp|location=Sequence derived from alignment at sc0000275_pilon:242802..247167- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCGCTTTTTGGGGATAGCGGTACTCGAAGACACACTCAAAGGGCTAG
AAGAAGAACAAGAAGTCCCTCGATAGAAGAGTATGAGCCAATCAAAGTAG
AGTATGAACGTGGTTATGACTTTGACCTTGTCAATGAAGAACAGAAAGTA
TCAGATTTGGAATGCACGATCTGCCATTTACTTTTGCGTGACGCACACTC
AACACCGTGTCATCACGCTTTTTGTCACGGATGTCTGGTGAAATGGAACA
ATGAACAACCAATTAGAAGAAGAATGTAAGCATAAAACACGATACACTCT
TTTTTATATAAATATCTTCTATAAGAATATCAGGGTGAAAATTTGCCAAA
TCGTAAGAATACCCTAAGAATACCCTCTAGGGTGAATTTCAAAGAATTTG
ATAAGAATACAGTCATTTTGTATTTGGTTAACAGAAAAACTGCTTCCTTT
GTTAGAGATAAAATTGAAACTTTGAGGAGGAAATGTGATTTTAACCCAAA
TGTTCACTCAAAAGTTCAAAACTCTCAAATTGATCATTTCTCATGTTTGT
AAAACAGGCAAGTCTAAAAAAGTAAGAATATGTTAAGAATATTTCACCCT
CAATTCTGGCAATTTCTTAAGAATACTTGACCCTCGCTCATCCAAAGTAC
ACTATTCTTATAAAAAAGCGTGTATTCTTATACCAGCAGAAAGCTCGTTC
TTTGTAAAAATCTAAGAGTAGCTTTATAAGATTTCCACAGAATGACTGGT
AATCGTGGACCAAAATTGGGCCTAATTGAAGAGGTAAGTTTCGTAAGTTG
AGATTTTTAGTGCCCCCTTTGTATAAAAAGTAAAACATATTTGTAGAAAT
AACGCGAGGGATGAAAATTTTGGGTATCTTCTCTCTGGTCAATCTTAAGA
AGTTGTAAATTAATAATCAGAAGCGCCTTTCCGCATCCCTTGTTTTTCGC
CCCATCCCCTTAAAAAAATTAAAACACGAAGAATCGGTCGCTGGGACTGG
GACAACTGCCCGCTCTGCCGCCACGCTACTGCTTGTAAGAATAGAAGTCA
TTTATATTTGATGGCATTCCTCTCGCGAATATATTTTCAACAAACAAAAA
TGGTTATAAATTTTATTCCGATTGTTTCATTTCAGGTCGTCACGTTGTCC
AAGTTGTAATGTACAATATGATCCTGATAAGGTGGGTTATATTACTTTAA
TTTATCATTCATAAAATTTGCGTATATAATTAAAGTTCTTTTTTTCATTG
ATCTTCATAACTAATTATTCTCAAAATACTCACTACCAAGAGAGCACGAA
ATTCTGAGCAAAAAAATGTATTACAACAACTCTCTGACTAAAACACACAA
ATAAATACAGCCGCTCGAAGTTCAAAAACATACCGACGTCAGTATGATCA
AGACAAAATTTTACGTCAAATCACTGTACAGCTGACAGTTAGTTGGTCTT
AAAGCAGCTGTATTTCTTTGTGTGTTTTAGACAGAGAGAGTTGATGTGAT
ACAATATTTTGCTCAGAATTTTATGTTCTATCAGATGGTACCAATCATTT
TCGTTTATTTTGACTTTTGATAATAAAGCTATTTTTCTACCCCTTATTTT
CCCTTGCAGTTTTGCCTAAGGCGTCCCGAGCCTAATCCGCGTCCTCCCTC
TCAAAATATCTTGTAATGTAATGTTCTTTGGAAAAGACTAAAAATGGCTA
GGTCGTAGAAAGATGTCACGGAACCCCAGGCTTGGCCCCGTACTAATGGG
CACAGACTTTTTAGGAAAAGATTTTTGATAAGCCAATAATAATTTTTTTA
TAGATTTCCTTTAATGGAGTGGTTGACAGGATGGTGAAAACAAGTATCGA
TGTCAAATGTCCACAAAACGAGAAAGGATGTCAATGGCAAGGAAAAATCA
TTGACTATAAGGTAATGGCTCGTCGTCACTCTGCAAAAATGATTTTTGAA
CATTTTTGTTTAGATTCGTGGTATTTATACGGAGACAACCAAAATAGCCC
TGGTGTTTGCCACTAATCTTATTGTTTATGTTCAAAATTCATGGCAAACA
TCTTTTTTGGAGCTATCATATAAAATATTACATCATGAATATCACGAATA
AGACTTGGTTAAAGTTTGCAGTGAGCCTTTTTTATACATTAGTGTGATCT
TAAGTGGGGTCTACTGCTATTTACTGCCCGTTTCGAAAACAAGGACTTGA
TTATCATGACTGGTACAGCATTCAGACACGTCTTAGTACGGAAAAGACAT
TGAAGATCTTTTTTCAATTATTACATTGAACAACACGACATCTCCGCATC
ACACCTTCGTTGATTAAAGAAATTTCATGAACCGAGTGGTCGGGTGTTTT
ACTGTATACTGAGTAATTTATATATAATATAATTATATAAAGATATAAGA
AACGGTGTATTTCTTCTCAATACTTTAAGTTTCTTGCTTACGCATTCATC
AGTTGATTAGAATTACACGCTTTTTTTTTATAAGAATATCTTCTATAAGA
ATATCAGGGTGAAAATTGGCCAAATCGTAAGAATACCCTAAGAATACCCT
CTAGGGTGAGTTTCACAGAATTTGATAAGCATGCAGTCATTTTGTATTTG
GTTAACAGAAAAAAACTGCTTCCTTCGTTAGACTTGAATTGAAACTTTGA
GGCAGAAATGTAATTTAGTTCCAAATATTCATTCAAAAGTCCAAATTGAT
CATTCTCATGTTTTTAAAAAAGTCAAGTTTAAAAAAGAAAGAATATGTTA
AGAATATTTCACCCTCAATTTCGGCAAATTCCTAAGAATACTTGACCGTA
ATCCAAAGTACACTATTCTTATAAAATAAAAAGCGTGTACAGTAAAACCT
CTAATTAACGGACACTCTAAAAGGCGGACACTCAATTAGCGGACCCTCTG
ATTAGCGGACAAAATTTGTCACACGAAATGGCCAAAACCCCTATTTTAGC
TCTCCAATTAGCGGACATTGAATATCAAACGGGTCACAGACGTCCAAAAT
TTAAAAAAATTGTTTTAGATATTTTTATTTCAAGCACTTATTAGTCTTAT
TTTTCAAATTATTTCTACAAATTTCCAGTTTTCCCTTGACCCATTCAACG
AATTTAGGTGGGCCAAAGAAAATCACTGGTATTTCAAGTCCGTACCCACC
ACCTCGATTTAACCTCTTGTCATTCACTCGAGCTCTTCTATGGCATAGTG
TCTGCAGATAAGTACTTTAGACCCCAATTTTGTATTTTTGACACCCTGGG
ATGGCCTAATTTCAAAATTGGAGCTCCGAGATCAAAAGTTTCTAAAAGGC
GGACACTTCTAATTAGCGGACACTAACCCCTTTCCCCGATGGTGTCCGCT
AATTAGAGGTTCCACTGTATGTAATTTATTATTTTAGGATCACGAGGAAA
CATGTGATTACGAGATGATACCGTGCAAGAACAAAGGGTGCCAAGAAAAT
GTAGCCAGACTTAAAATGAATTACCACGAAGGAAATTGTGGATACCGAAG
AGTTGAATGTGACTTTTGTTGTTTGGAGATGTCAGCTCGTGAAATCGAAG
TTAGAATACCAATATTTCACGTTTTCCTTCATTTCCACCTAAACCCATAT
TCTTTTCCATTTATCATTTTTCTAAAATGTGAGCATGAGCTTATTTGTGT
GGGTCGATACTGGAACTAACCCAACCCCATCAATGAGTTAGAACCGTCTA
CAATAAACCTGGGAGGGAGAAATCTTAATTGAACAGATTTCTGTCTACAA
AAGGAAGAATAGCGACAATGTCAGTCTCTTCGGAAAAATGCCAACATCTT
GACGCGTTTTTCGGACAACCGATATATCTTCTTTTTTTATCTGATTTTAT
AGAATCATCACAGAGAATGTCCTTTCATAAATGTGGAATGCCCCAATGAT
GAATGTCAACTCGAATATCTTCGACAAGAGGTAAAAATCGATTCCAATTT
TATGCTACTTGAACTTGGTCTTACTTAGTTATAAGTAAAAAGAAGTATAC
TCATCTGGTGGCTGTCTATTTTCTTTTTTATTTGCGCTAGACCTAGGAGA
TCGAATGCTGAGGTGGAGCGTCACACCAACTCTCAGCTCCCAACCGCCTA
GATCAGATTACCCTAGATTAAGCTAATCATTCGCTGAATCAGCGGTAACC
GGGGATCGAACCCACAGCCCTTTGATTGTAAGGCAAAATGCTCTACCGAC
TGAGCTACCAGGTCACGATACTTCTAGATTGGATGAATGAATAAAAAAAA
TGATAGAAAGAAAAAAATACTTTTCTTTCTTTACTGTACAGATTCCCAAA
CATTTGGCTGAAGAATGTTTGTATGAAAAAATTGCATGTGAATATTCTGA
TGTCGGCTGCAACCAA Coding sequence (CDS) from alignment at sc0000275_pilon:242802..247167- >XLOC_022885 ID=XLOC_022885|Name=XLOC_022885|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1488bp|location=Sequence derived from alignment at sc0000275_pilon:242802..247167- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCGCTTTTTGGGGATAGCGGTACTCGAAGACACACTCAAAGGGCTAG
AAGAAGAACAAGAAGTCCCTCGATAGAAGAGTATGAGCCAATCAAAGTAG
AGTATGAACGTGGTTATGACTTTGACCTTGTCAATGAAGAACAGAAAGTA
TCAGATTTGGAATGCACGATCTGCCATTTACTTTTGCGTGACGCACACTC
AACACCGTGTCATCACGCTTTTTGTCACGGATGTCTGGTGAAATGGAACA
ATGAACAACCAATTAGAAGAAGAATATGCCGCTTTTTGGGGATAGCGGTA
CTCGAAGACACACTCAAAGGGCTAGAAGAAGAACAAGAAGTCCCTCGATA
GAAGAGTATGAGCCAATCAAAGTAGAGTATGAACGTGGTTATGACTTTGA
CCTTGTCAATGAAGAACAGAAAGTATCAGATTTGGAATGCACGATCTGCC
ATTTACTTTTGCGTGACGCACACTCAACACCGTGTCATCACGCTTTTTGT
CACGGATGTCTGGTGAAATGGAACAATGAACAACCAATTAGAAGAAGAAT
GTCGTCACGTTGTCCAAGTTGTAATGTACAATATGATCCTGATAAGGTCG
TCACGTTGTCCAAGTTGTAATGTACAATATGATCCTGATAAGATTTCCTT
TAATGGAGTGGTTGACAGGATGGTGAAAACAAGTATCGATGTCAAATGTC
CACAAAACGAGAAAGGATGTCAATGGCAAGGAAAAATCATTGACTATAAG
ATTTCCTTTAATGGAGTGGTTGACAGGATGGTGAAAACAAGTATCGATGT
CAAATGTCCACAAAACGAGAAAGGATGTCAATGGCAAGGAAAAATCATTG
ACTATAAGGATCACGAGGAAACATGTGATTACGAGATGATACCGTGCAAG
AACAAAGGGTGCCAAGAAAATGTAGCCAGACTTAAAATGAATTACCACGA
AGGAAATTGTGGATACCGAAGAGTTGAATGTGACTTTTGTTGTTTGGAGA
TGTCAGCTCGTGAAATCGAAGATCACGAGGAAACATGTGATTACGAGATG
ATACCGTGCAAGAACAAAGGGTGCCAAGAAAATGTAGCCAGACTTAAAAT
GAATTACCACGAAGGAAATTGTGGATACCGAAGAGTTGAATGTGACTTTT
GTTGTTTGGAGATGTCAGCTCGTGAAATCGAAAATCATCACAGAGAATGT
CCTTTCATAAATGTGGAATGCCCCAATGATGAATGTCAACTCGAATATCT
TCGACAAGAGAATCATCACAGAGAATGTCCTTTCATAAATGTGGAATGCC
CCAATGATGAATGTCAACTCGAATATCTTCGACAAGAGATTCCCAAACAT
TTGGCTGAAGAATGTTTGTATGAAAAAATTGCATGTGAATATTCTGATGT
CGGCTGCAACCAAATTCCCAAACATTTGGCTGAAGAATGTTTGTATGAAA
AAATTGCATGTGAATATTCTGATGTCGGCTGCAACCAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000275_pilon | genome | sc0000275_pilon:242802..247167 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 670-744:76 |
| Aaloc | 592-669:515 |
| Aaloc | 430-591:980 |
| Aaloc | 322-429:2564 |
| Aaloc | 277-321:3231 |
| Aaloc | 1-273:4367 |
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