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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000320_pilon:81434..84259+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_022805 ID=XLOC_022805|Name=XLOC_022805|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2826bp|location=Sequence derived from alignment at sc0000320_pilon:81434..84259+ (Clytia hemisphaerica_ch_hm2_pilon)
gtactGAAGAGTGAGGAATTACAGAAGGACCAAGAGTCATTGCAAAGCGA
AAAATTACATAATGATGATAAATCACAGAAgaaagaattatcaaaagaaG
GAAACTCACAAAAAGACGAAAAATTACTAAATGCCAAGGAATCACCGAAA
CACGGAGAGTCTTGGAAAGACGAAAAATTGCAACATAGCCAGGAATCACC
GAAAAACGAAGGATCCtcgaaagaagaaaaattacaacaTGGCGAGGAGT
CACCGAAAGACGAAAAATTACATAAAGACGATGAATCACCAAAAGAAGAA
TTACCAAAAGACGAAGAATCCCTGAAAGACGATAAATCCTTGAAAGACAA
ACAATTAAGAACAAACGAAAAGCCACTTGAACAGAAGGATTTACAGAAGA
CCGATGGATCACCAAAGGATGACAAATTACAGAAGGACGAAAAACTACcc
aatgaagaaaaatttcaaaaggtcGAACACAAGCAAGAACTGGTAGAAGA
TAGTGATGATGACAGGGATGAAATGTTTGTACTGGACAAGTCTGACGTGT
GGAGTAATAGTAAGTATCAAAGCTCTGTTTAAAAAAGCGATATTAGAgtt
aaaaagttacaaatttttgaaattctttaatggTAGTTGGGAGTCAGTAG
TATCTTTAGCGTAATTAAGAAACGTTTTTTACCAACATTCCTATGACTAG
CTGGCTGTATCATTTGAGGCGTGCGATAGTATgcgcacacctccacacac
cTGAAATGTCTTAGGAGTGCGATTTATTGCAAGCCATAAAATTAGTTTTA
CAACTCAAAGTTGAGCATAGCACTCCTAATCGCAAGATGGATTCACTTGT
TATCATGTGATTATATATACTAATCAGTAATCACACAtctaaattactaa
aattaaggttttaGGAGTGtttttttGTACTCTGTACTAAAAGATAGCCG
TTATGAACAATCTCGTTTCATAACGATTTTCCAGTGCATAAAGACGATGA
ACCACCTAAAGAAGAATTACCAAAAGACGAAGAATCTCTGAAAGACGATA
AATCCTTGAAAGACAAACAATTACGAAAGAACGAAAAGCCACTCGAACAG
AAAGATTTACAGAAGACCGATGGATCACCAAAGGACGACAAATTACAGAA
GGATGAAAAATTACCCAATGAAGAAGAATTTCGAAAGGTCGAACACAAGC
AAGAACTGATAGAAAATAGTGATGCTGACAGTGATGAAATGTTTGTTCTG
GACAAGTCTGACGTGTGGAGTAATAGTAAGTATTGAAGCTCTGTTTAAAA
TAGCGATATTAGAgttaaaaagttacaaaattttgaaattctttcccTAA
TGAAAGTCGGGAGTCAGAAGTTCCTTTAGCCTAATTAAGAAACGTCTTTT
ACCAACATTCCTATGGCTAGAcattttttgtactttgtacTAATAGTTGG
CCGTAATAAACAATCTTGTTTTATAATGATTTTCAAGTACATAAAGACGA
TGAATCACCAAAAGAAGAATTACCAAAAGACAAAGAATCTCTGAAAGACG
ATAAATCCTCGGAAGACAAACAATTAAGAAAGAACGAAAAGCCACTCGAA
CAGAAAGATTTACAGAAGACCGATGGATCACCAAAGGACAACAAATTCCA
GAACAACGAAAAACTACccaatgaagaaaaatttcgcAATGTCAAACACA
AGCAAGAACTGACAGAAAATAGTGATGCTGACAGTGATGAATTGTTTGTA
CTGGACAAGGCTGATGTGTGGAGTAATAGTAAGTATCAAAACTCTGTTTA
AATTAGCGATATTAGAgttaaaaagttacaaatttttgaaattctttctc
TAGGTAGTCAGGGGTCAGTAGTTCCTTTAGCCTAATTAAGAAACGTCTTT
TACCAACATTCCTATGACTAGACATTTTTAGTACTCTGTTTTTCCAGAGA
CAAATAACTGTTATAAATACCGATTTTTGCCGTTTCACCAGGTTTCACAC
ACATTATAGCTCCTCTCAGACTTATCCAGCATCCCCTGTTTCACAAAGGA
GGATTTTAAAAGAAACCTCCTCTCTAAAACTTCTAACAGCTATATAATAA
ATTATGTTGTTGAGATATCTTTGTTAGTTGATTTTCCAACCTcttcttgt
gTttttttttttaaccaaaccTTtttttttttggtcactttggtgttttt
cagagaaatttaatgaaaattttagcttcaaaGAGAAAGTGACCTGTtat
aaaccatttgaaagctcccaaaaaataaaaacaagattaGAGATGTATTG
GGAGTATAGGTGGTTTCTCTACCTAACTCGGGATACTAAGCTTCAAAGAG
AGCAAAAACCAGAGAAGACAGCTGTTCCTGGCTAAAAATCACTCAGAAAT
CATCTATACATTACCTGTAATATCTAATCTCACTGCGTTTGTTCCATTCG
GCTCCAATGTCAGTCCATTTTTTCTCGAATGGACCTCCTAAACAGTTACT
TAGTAGTATGCGTATTATAACATCTCTCTTTTCTAAAGCCAAAAtgttca
ttaaattttgattcttgcctgagaccgtcatttTTCTCCCCGGAAAACAC
ACCAAAGTGTGAACTTTGCATAACACAAATTGAACAGATCCCTCCACTAA
GCTTTTTCTACGTTTCAGATGATACTGGAAATACTCGAAGATCctcaaga
aaacgaaaaaaaacgaTCAGCTACAAAGGGATGGAATTAGAACATGATGG
CCTAGAAACGTTTGGTGATCCTGACTTTATCCGTAAGCTACTTTTATTGT
GTTTAACATTGAGGAAGTATTATTAA Coding sequence (CDS) from alignment at sc0000320_pilon:81434..84259+ >XLOC_022805 ID=XLOC_022805|Name=XLOC_022805|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2526bp|location=Sequence derived from alignment at sc0000320_pilon:81434..84259+ (Clytia hemisphaerica_ch_hm2_pilon)
gtactGAAGAGTGAGGAATTACAGAAGGACCAAGAGTCATTGCAAAGCGA
AAAATTACATAATGATGATAAATCACAGAAgaaagaattatcaaaagaaG
GAAACTCACAAAAAGACGAAAAATTACTAAATGCCAAGGAATCACCGAAA
CACGGAGAGTCTTGGAAAGACGAAAAATTGCAACATAGCCAGGAATCACC
GAAAAACGAAGGATCCtcgaaagaagaaaaattacaacaTGgtactGAAG
AGTGAGGAATTACAGAAGGACCAAGAGTCATTGCAAAGCGAAAAATTACA
TAATGATGATAAATCACAGAAgaaagaattatcaaaagaaGGAAACTCAC
AAAAAGACGAAAAATTACTAAATGCCAAGGAATCACCGAAACACGGAGAG
TCTTGGAAAGACGAAAAATTGCAACATAGCCAGGAATCACCGAAAAACGA
AGGATCCtcgaaagaagaaaaattacaacaTGACGATGAATCACCAAAAG
AAGAATTACCAAAAGACGAAGAATCCCTGAAAGACGATAAATCCTTGAAA
GACAAACAATTAAGAACAAACGAAAAGCCACTTGAACAGAAGGATTTACA
GAAGACCGATGGATCACCAAAGGATGACAAATTACAGAAGGACGAAAAAC
TACccaatgaagaaaaatttcaaaaggtcGAACACAAGCAAGAACTGGTA
GAAGATAGTGATGATGACAGGGATGAAATGTTTGTACTGGACAAGTCTGA
CGTGTGGAGTAATAACGATGAATCACCAAAAGAAGAATTACCAAAAGACG
AAGAATCCCTGAAAGACGATAAATCCTTGAAAGACAAACAATTAAGAACA
AACGAAAAGCCACTTGAACAGAAGGATTTACAGAAGACCGATGGATCACC
AAAGGATGACAAATTACAGAAGGACGAAAAACTACccaatgaagaaaaat
ttcaaaaggtcGAACACAAGCAAGAACTGGTAGAAGATAGTGATGATGAC
AGGGATGAAATGTTTGTACTGGACAAGTCTGACGTGTGGAGTAATATGCA
TAAAGACGATGAACCACCTAAAGAAGAATTACCAAAAGACGAAGAATCTC
TGAAAGACGATAAATCCTTGAAAGACAAACAATTACGAAAGAACGAAAAG
CCACTCGAACAGAAAGATTTACAGAAGACCGATGGATCACCAAAGGACGA
CAAATTACAGAAGGATGAAAAATTACCCAATGAAGAAGAATTTCGAAAGG
TCGAACACAAGCAAGAACTGATAGAAAATAGTGATGCTGACAGTGATGAA
ATGTTTGTTCTGGACAAGTCTGACGTGTGGAGTAATATGCATAAAGACGA
TGAACCACCTAAAGAAGAATTACCAAAAGACGAAGAATCTCTGAAAGACG
ATAAATCCTTGAAAGACAAACAATTACGAAAGAACGAAAAGCCACTCGAA
CAGAAAGATTTACAGAAGACCGATGGATCACCAAAGGACGACAAATTACA
GAAGGATGAAAAATTACCCAATGAAGAAGAATTTCGAAAGGTCGAACACA
AGCAAGAACTGATAGAAAATAGTGATGCTGACAGTGATGAAATGTTTGTT
CTGGACAAGTCTGACGTGTGGAGTAATATACATAAAGACGATGAATCACC
AAAAGAAGAATTACCAAAAGACAAAGAATCTCTGAAAGACGATAAATCCT
CGGAAGACAAACAATTAAGAAAGAACGAAAAGCCACTCGAACAGAAAGAT
TTACAGAAGACCGATGGATCACCAAAGGACAACAAATTCCAGAACAACGA
AAAACTACccaatgaagaaaaatttcgcAATGTCAAACACAAGCAAGAAC
TGACAGAAAATAGTGATGCTGACAGTGATGAATTGTTTGTACTGGACAAG
GCTGATGTGTGGAGTAATATACATAAAGACGATGAATCACCAAAAGAAGA
ATTACCAAAAGACAAAGAATCTCTGAAAGACGATAAATCCTCGGAAGACA
AACAATTAAGAAAGAACGAAAAGCCACTCGAACAGAAAGATTTACAGAAG
ACCGATGGATCACCAAAGGACAACAAATTCCAGAACAACGAAAAACTACc
caatgaagaaaaatttcgcAATGTCAAACACAAGCAAGAACTGACAGAAA
ATAGTGATGCTGACAGTGATGAATTGTTTGTACTGGACAAGGCTGATGTG
TGGAGTAATAATGATACTGGAAATACTCGAAGATCctcaagaaaacgaaa
aaaaacgaTCAGCTACAAAGGGATGGAATTAGAACATGATGGCCTAGAAA
CGTTTGGTGATCCTGACTTTATCCGTAAGCTACTTTTATTGTGTTTAACA
TTGAGGAAGTATTATTAAATGATACTGGAAATACTCGAAGATCctcaaga
aaacgaaaaaaaacgaTCAGCTACAAAGGGATGGAATTAGAACATGATGG
CCTAGAAACGTTTGGTGATCCTGACTTTATCCGTAAGCTACTTTTATTGT
GTTTAACATTGAGGAAGTATTATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000320_pilon | genome | sc0000320_pilon:81434..84259 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1108-1263:2671 |
| Aaloc | 817-1104:1490 |
| Aaloc | 526-813:987 |
| Aaloc | 244-522:280 |
| Aaloc | 1-240:1 |
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