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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000309_pilon:186918..193316- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_022705 ID=XLOC_022705|Name=XLOC_022705|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6399bp|location=Sequence derived from alignment at sc0000309_pilon:186918..193316- (Clytia hemisphaerica_ch_hm2_pilon)
ATCTTCAAAATCAACTTTTCACTGGACGTATCCGATACACTTGAATGTAA
GACACTTTCTTATTCCTAATAGTATCTAACTGTTTCCGCTTATTCCGGAA
GGGAAAAACCTGCATTGACCATATCGTTACCTCATTCTCAAAAGTCATCC
ACGATGATGTTATCCCATGCGACGAAATGAGCGATCGTGATGCTGCCTTC
GTCATATGTAATCTACGCAAGCCACGGTTTGAACCCAGATATAAATTTAT
TCGAAATGAGAAAAACTTTAATTTAGCAGCATTTAAAACAGATATCAGAC
AAATACCGTTCAATCTTGTTTACGCTTTTGATACCGCTGAAGAAAAACTA
GACATATTTAACAAACTTTTTACTGATTGTCTAGACCGACACGCACCCCT
CATCAGGCAGAAATTAACGCGCCCACCAGCTCCGTGGTTAAAAGATCTCA
ACATCAGCGAGAAGCAAAAGGAAAGAGACTATTTACGAACCAAATGTCAT
TCCCCGCAGTCCGAGCAAAAAGATTGGGATCTGTTTCGTAAAATCCGAAA
CGAATTAAAAAACTCTTATTCGAGTAACAAAATCCAGTTTTTACCGACGC
GCACTATCCTCCAAAAGACCGAAAGAAGTATGGTCAACCATCCATCGCAT
CCTGAAACCATCACCACAAAAGATATCCGCTGACCCCGACACACTCAATG
TCCACTTCAACACAACAGCCGGGAGACTTCTTAACTCAAAACCTAAATCA
GAGCAAATCCTACATCAACTCATCAACGAATTACCTGCACAAGACAATCC
ATTCGACATAAACGAAGTTTCCTACGCTGACGTTCGTAAAGCCTTATGTA
ATCTTCGAAACGACTGCTCAACCGGCCATGACCAGATACCGTCGAAATAC
ATTAAACTCGCCATCGATGAAATCTGTAGTCCCATTTGCCATTTTATCAA
CTCTTCCATTCGACAATCCGTCTTTCCTAGCCAGTGGAAGATCTCGAAAA
TCAGCCCTATTCCTAAAATTGAGTCACCCGCTGATCCGAGCGACTACCGT
CCAATCTCCATATTACCGATCCTTTCAAAAGTATACGAGAGACTGATTAT
GACACAAATGACAAACTATCTAGAAAGTGAAGAACTACTATCAATACATC
AATCTGGTTTTCGAAAGGGTCACTGCACAATAACCACCTGCATCAAAATC
AAAAACGACATCCTGAAAGCGATGAATCGAGGCGAAATCACTCTTGCAGT
TCTCGCTGACTTTTCAAAAGCATTTGATACAGTTGATTTTGAAACTCTTA
TCAAAAAACTTCACACACTACGATTCTCAAAAAAGTCACTCTATGTTATC
TCCAACTATCTGAGCAATCGACTTCAGTACGTACAGATCAACGACAAGAA
GTCATCCATTCTCACAGTTACTAATGGCGTCCCCCAAGGAAGCATACTTG
GACCCATTCTCTTCAACATTTACGTCTACGACATGGCAACAAAAACCACC
GCAAAATGTGTTCAATATGCTGATGACACGACAATATATCGCCACACCAA
ACCAAACGAGCTTGAAAATTGTGTCACTGAAATGAACTCTGATATTAGCG
TAATTGAGAAATGGTCGCTGGATTCGAACTTGATATTTAACGCCAGAAAA
ACTAAATCGATGCTCTTTGCCACATCTCAAATGGCAAGGAGGCATAATTT
TGAATTCGAAATCAAGTCAAATAACGAAAATGTGATTGAGCGTGTTCCCC
TATTCAAGCTGTTAGGAATCATCTTCACCGAAAACCTAACATGGAATGAA
CATGTCAAAAAAATCGTCACTAAAGCATATGGCACGCTGAAGAGTCTATC
CCTCATCAAACGATATTTACCATACCGTGTACGACGCCAATTGGCAGAAT
CTCTTGTATTGAGTAAAATAGACTATGGTAATACCGTAATTCACAACGCA
CCACAATATCTATTCAACCAATTACAACGAGTCCAAAATGCCACAGCTAG
CTTCGTCCGGAAGAGCTACTCTCGCAAGTCTGACGTAATAGATATGAAAT
GGCTACCTGTCAAAGAACGGACCGAATACAGTTTGGCTAAGCTTGCGTGG
AAATCAGTGAATATGAATGACTGGCCCAAATTCCTCCCTATGGAGAAATA
TGTGCAAGCCAAGACTCGAACGGATGTAATTGGTGGAACTAAATTGCGTG
AAACCTGTAACGTTAGTGGTTCCTTTGAATCTGAAGCTTCTAAAATTTTT
AATGAACTACCTGTTAACTGTCGTGACTCAGAAACTTACAAAGCCTTTTG
TCAAGAAACAAAAAAATATTTTTTCGACAAAGCCCTAGCTAGGAGCTTGC
AGTAGTACCATATTCTACCAACTGTAGTCCCTGCGTTGCTACTCGCTATT
TCCTAGCTGGTGCTTTCTATGTTATATTATTTCTTATACCTAGTTTTAGT
CTAATTCTCGATTTGATTCACGCGCCATTTTAGTTTCAAATTTAATTCTG
ATTTCAATTCTTCTAATATCCCTACTCGTAGCCTTGGTTCCCTAGTCTCC
ATTCTGATTTTTAGATTTAGCCCATCTGTTCTTAGGTTTACTTAGTCTGT
ATTTTCTTCAGTGCATATATATGACTTTATTATATTCTAGTTCTATGAAG
TTTTTTTTTTTCCATTTTGATGTTTAATTATTTTCAATTAATTTAATTTA
GATAGTTGATAGCTCACTTATTTATGTTAAAATACTGGTCGTGTTTTGCA
AGGTCCAGTACACTTTTACACAGCCTTCGGTGTTGCAATCTATGCAAGTT
TTACTCATTCTATCTTACGCTCTGTCGTGATTCTATCTCACCGAGTTCTT
AGATCTATTATTTCGCTTACTTTACCTCTAGCCACCAATAGTACTTGAAC
CTTAGTCTAGTCTAGCTTATAACATTATGTTAGTATTTTTTTTTAAATAT
ATTCCTTAATTTTTTATAATAGCACACATTGCGATGGCCTCAGCTAGCAT
ACTCAGATACTCGGATTTGTTTAGGTTTTAGTCTAGCTCTATCACTATTC
ACATTTTACCCCTTATACTTCTTAATCCTAATCATTTTATTCGTCATACT
AGCCCACCGCTTCGTCCCTATCTGCTTGTCCGCATACGGTCCCAATTTTT
CTTCAGTATACTACCAGGTTATTTTACAATTTTTTTTCTAGACATTGCAC
ATATATTATATACAGAATTTTCAGGTGAAGAGCCAAATGTAAATTTTGGA
AATGCCAGAAATATATCATTATTATTATTATTATTATTGCATTGATCTTA
AGGAGAAGTACTTGCACCGGTAGGGTGAACCCACCTTCCTTATTCTCATG
TTATTCCAAAAATTAAGGTTGTTTGTTCCCAATAGTGTATGGTAGTTACT
TGTTATTACACGAAATTTAAGGAAAAGGTCAAGTGGCGGTAAGGGTGGTA
GGGTGAACCCACACTCCTTATTTTCATCTTATTCCAAAAATCAAGGTTGC
TTGTTCCCACTTGTGTATGGTAGTTACTTGTTATTACACGAAATTTAAGG
AAAAGGCCAAGTGGCGGTTAGGGTGGTAGGGTGAACCCACCCTCTTTATT
CCCATCTTATTCCAAAAATTAAGGTTGCTTATTCCCACTAGTGTATGGTA
GTTACTTGTTATTACATGAATCTCAAGGAAAAGGTCAAGTGGCGGTTAGG
GTGGTAGGGTGACCCCACCCTCCTTATTCCGATCTTATTCCAAAAATTAA
GGTTGCTTGTTCCCAATAGTGTCTGGTAGTTCCTTGTTATTACATGAATC
TTAAGGAAAAGGTCAAGTGGCGGTTGGGGGTGGTAGGGCGACCCCACCCT
CCTTATTCTCATCTTGTTCCAAAAATTAAGGTTGTTTGTTCCCAATAGTG
TCTGGTAGTTACTTGTTATTACATGAAACTTAAGGAAAAGGTCAAATGGC
GGTTGGGGGTGGTAGGGCGACCCCACCCTCCTTATTCCAAAAATTAAGGT
TGCTTGTTCCCAATAGTGTATGGTAGTTACTTGTTATTACATGAATCTTA
AGGAAAAGGTCAAGTGGCGGTTAGGGTGGTAGGGTGAACCTACCCTCCTT
ATTCCCATCTTATTCCTACAATTAAGGTTGCTTGTTCCCAATAGTGTATG
GTAGTTACTTGTTATTACATGAAACTTAAGGAAAAGGTCAAATGGCGGTT
GGGGGTGGTAGGGCGACCCCACCCTCCTTATTCCGATCTTATTCCAAAAA
TTAAGGTTGCTTGTTCCCAATAGTGTCTGGTAGTTACTTGTTATTACATG
AATCTTAAGGAAAAGGTCAAGTGGCGGTTGGGGGTGGTAGGGCGACCCCA
CCCTCCTTATTCTCATCTTGTTCCAAAAATTAAGGTTGCTTGTTCCCACT
AGTGTATGGTAGTTACTTGTTATTACATGAATCTTAAGGAAAAGGTCAAG
TGGCGGTTAGGGTGGTAGGGTGAACCCACCCTCCTTATTCCCATCTTATT
TCTAAAATTAAGGTTGCTTGTTCCCAATAGTGTATGGTAGTTACTTGTTA
TTACATGAATCTCAAGGAAAAGGTAAAAATGGCGGTTTGGGTGGTAGGGT
GAGCCCACCCTCTTTATTCCGATCTTATTCCAAAAATTAAGGTAGCTTGT
TCCCACTAGTGTATGGTAGTTACTTGTTATTACACGAAATGAATTTTCGT
GAAATTGCACTCCAAGGCTTCAAGTTGACTTTAGTTGTTTTTTCAATACA
AGTGGTAAAGAGCACATCTTGAATTTTTTTCAGCTTCTGAAGTGTCAGCC
AAGTTTATTCCCACTGATCCCATATGCATTGCCGTTAATCATATCGAAAG
GCACATGAGAAAGAAGAATTATGCCATTTCTCAAGGAAAGATATACAAGA
AAGCTCCTGACAGCCAATTCACTTATGTTTATTGCATTACCGTACCAAAA
TATCTAAAGAAACTTCTCGGCATTGCAAAGATTGCCAACAAACTTGCATC
ACACATTACAGCAGTCAGCAACTTGTTATCGGATCCTGATTGCGGACTTA
TCAAGCCAATCAAAATTTTGTTCAACATTATTGAAGTTCTTCCAGAAGGT
ACAATTTTCCTGATATCCGAAAAAAAGTTTTACAAAATCAAACAGTTCCC
CCAAGGTTGCACGCCGAGGGCATTCGTACGTTACCAGTATCTTAAAGACA
GAACTCCATACCCAAGACCATTTGTTCAAGGTTAGTAAATCTTACGTTTT
TTCTTGTTGTTTTAAGTTGAAATAGCTTTGGAGGTTACATTCAACTCTTT
AAGTTTAACATTTCCAGATTCGATGTGTAATTATGGTTTTATTTTTTCAG
GAATATTCAACAGTTTTCCCGATGCGAAAACTCGTACAGAATTTCTACAA
AAGTATTATCAGCTGTTGCTACACCGTAAATTTCCCATGAAAGAGCCCAA
GCTAATTCTCCAAGGCGAATCGGACTCGGGGAAGACCAGTTGGGCGGCAC
CATTTGATGGAATCATTTCTACAGAGAATATTGCGGGTGTTACCCAAGAA
GGGAAGTTTGCTGGTCATCTTATCAATAACCAAACTGAATTAGTATTTAT
GGACGAGTGGACCGTCAACTCTTTGAGCTGTGAAGATGCCAAACGAATTC
TACAAGGTAAATAGCCTTAAAGTACTAAATATGTGCAAAAGCTTTCTGTT
CGGAAAATGTCAATTCAACTGTAAACCTTTAGCTTCGTAAGTAGTCTAAC
TCAAGGTTATTTAATTTTTTCAGGTGGTCTTGTGATGCTAGCTCAAAAGC
ACACGTCAGCGACCAAAGTGATGTACAATTCGGGCTTCTTCATAACGACC
AACGTTCTGCCAAACTTTGGAATCTCCCTAGATCATGACGCAGTGTATTC
TCGTCTAAAAGTCTTCATGACAAAGCCACTACCAAAGAAAGATTCAAGTG
TTACAAGTGAGTCGTGTTACATTAACAAACAAAGAGAGAACTGTTAATTT
CGTACTTACTTCGATGCTTTCTTTACTTTTACTTGTACATTTTGAAAAGT
CAGTTTACTTCTTTGCTTTTTAGAATGGCTACGAACAAACTGCATGCAAG
TGTTCCATTATTGTGCTGAAGTGTTAAAAGAAACGCCACTTTTCGAGACT
TGTGACGATGCATATGTTTTTGCACCGGCCACTGGAGCCCCTGAAGAAGA
AGATGCGGTTTACAACGATTACGATGGTGCAGCCCACACTAAACTTGTTG
CGCTTTCGGATTTCCACAACGAAGAGGATGAATTGGATAGTTCACAAGCG
GCGATAAGCAAGATCCACGAACAAATCATTCGCGATCCACTTATTGATGA
TGAGGACATCGACTATTACTTTTTGGAATCGGATGAAGCAAATCCTGCA Coding sequence (CDS) from alignment at sc0000309_pilon:186918..193316- >XLOC_022705 ID=XLOC_022705|Name=XLOC_022705|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2616bp|location=Sequence derived from alignment at sc0000309_pilon:186918..193316- (Clytia hemisphaerica_ch_hm2_pilon)
ATCTTCAAAATCAACTTTTCACTGGACGTATCCGATACACTTGAATATCT
TCAAAATCAACTTTTCACTGGACGTATCCGATACACTTGAATCTTCTGAA
GTGTCAGCCAAGTTTATTCCCACTGATCCCATATGCATTGCCGTTAATCA
TATCGAAAGGCACATGAGAAAGAAGAATTATGCCATTTCTCAAGGAAAGA
TATACAAGAAAGCTCCTGACAGCCAATTCACTTATGTTTATTGCATTACC
GTACCAAAATATCTAAAGAAACTTCTCGGCATTGCAAAGATTGCCAACAA
ACTTGCATCACACATTACAGCAGTCAGCAACTTGTTATCGGATCCTGATT
GCGGACTTATCAAGCCAATCAAAATTTTGTTCAACATTATTGAAGTTCTT
CCAGAAGGTACAATTTTCCTGATATCCGAAAAAAAGTTTTACAAAATCAA
ACAGTTCCCCCAAGGTTGCACGCCGAGGGCATTCGTACGTTACCAGTATC
TTAAAGACAGAACTCCATACCCAAGACCATTTGTTCAAGCTTCTGAAGTG
TCAGCCAAGTTTATTCCCACTGATCCCATATGCATTGCCGTTAATCATAT
CGAAAGGCACATGAGAAAGAAGAATTATGCCATTTCTCAAGGAAAGATAT
ACAAGAAAGCTCCTGACAGCCAATTCACTTATGTTTATTGCATTACCGTA
CCAAAATATCTAAAGAAACTTCTCGGCATTGCAAAGATTGCCAACAAACT
TGCATCACACATTACAGCAGTCAGCAACTTGTTATCGGATCCTGATTGCG
GACTTATCAAGCCAATCAAAATTTTGTTCAACATTATTGAAGTTCTTCCA
GAAGGTACAATTTTCCTGATATCCGAAAAAAAGTTTTACAAAATCAAACA
GTTCCCCCAAGGTTGCACGCCGAGGGCATTCGTACGTTACCAGTATCTTA
AAGACAGAACTCCATACCCAAGACCATTTGTTCAAGGAATATTCAACAGT
TTTCCCGATGCGAAAACTCGTACAGAATTTCTACAAAAGTATTATCAGCT
GTTGCTACACCGTAAATTTCCCATGAAAGAGCCCAAGCTAATTCTCCAAG
GCGAATCGGACTCGGGGAAGACCAGTTGGGCGGCACCATTTGATGGAATC
ATTTCTACAGAGAATATTGCGGGTGTTACCCAAGAAGGGAAGTTTGCTGG
TCATCTTATCAATAACCAAACTGAATTAGTATTTATGGACGAGTGGACCG
TCAACTCTTTGAGCTGTGAAGATGCCAAACGAATTCTACAAGGAATATTC
AACAGTTTTCCCGATGCGAAAACTCGTACAGAATTTCTACAAAAGTATTA
TCAGCTGTTGCTACACCGTAAATTTCCCATGAAAGAGCCCAAGCTAATTC
TCCAAGGCGAATCGGACTCGGGGAAGACCAGTTGGGCGGCACCATTTGAT
GGAATCATTTCTACAGAGAATATTGCGGGTGTTACCCAAGAAGGGAAGTT
TGCTGGTCATCTTATCAATAACCAAACTGAATTAGTATTTATGGACGAGT
GGACCGTCAACTCTTTGAGCTGTGAAGATGCCAAACGAATTCTACAAGGT
GGTCTTGTGATGCTAGCTCAAAAGCACACGTCAGCGACCAAAGTGATGTA
CAATTCGGGCTTCTTCATAACGACCAACGTTCTGCCAAACTTTGGAATCT
CCCTAGATCATGACGCAGTGTATTCTCGTCTAAAAGTCTTCATGACAAAG
CCACTACCAAAGAAAGATTCAAGTGTTACAAGTGGTCTTGTGATGCTAGC
TCAAAAGCACACGTCAGCGACCAAAGTGATGTACAATTCGGGCTTCTTCA
TAACGACCAACGTTCTGCCAAACTTTGGAATCTCCCTAGATCATGACGCA
GTGTATTCTCGTCTAAAAGTCTTCATGACAAAGCCACTACCAAAGAAAGA
TTCAAGTGTTACAAAATGGCTACGAACAAACTGCATGCAAGTGTTCCATT
ATTGTGCTGAAGTGTTAAAAGAAACGCCACTTTTCGAGACTTGTGACGAT
GCATATGTTTTTGCACCGGCCACTGGAGCCCCTGAAGAAGAAGATGCGGT
TTACAACGATTACGATGGTGCAGCCCACACTAAACTTGTTGCGCTTTCGG
ATTTCCACAACGAAGAGGATGAATTGGATAGTTCACAAGCGGCGATAAGC
AAGATCCACGAACAAATCATTCGCGATCCACTTATTGATGATGAGGACAT
CGACTATTACTTTTTGGAATCGGATGAAGCAAATCCTGCAAATGGCTACG
AACAAACTGCATGCAAGTGTTCCATTATTGTGCTGAAGTGTTAAAAGAAA
CGCCACTTTTCGAGACTTGTGACGATGCATATGTTTTTGCACCGGCCACT
GGAGCCCCTGAAGAAGAAGATGCGGTTTACAACGATTACGATGGTGCAGC
CCACACTAAACTTGTTGCGCTTTCGGATTTCCACAACGAAGAGGATGAAT
TGGATAGTTCACAAGCGGCGATAAGCAAGATCCACGAACAAATCATTCGC
GATCCACTTATTGATGATGAGGACATCGACTATTACTTTTTGGAATCGGA
TGAAGCAAATCCTGCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000309_pilon | genome | sc0000309_pilon:186918..193316 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 985-1308:325 |
| Aaloc | 802-981:625 |
| Aaloc | 496-798:1048 |
| Aaloc | 49-492:1615 |
| Aaloc | 1-45:6400 |
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